RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 CD52P31358 61 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 BFSP1Q12934 665 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 PPIGQ13427 754 aaKnown RBP eCLIP11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 DSC3Q14574 896 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 PSMD6Q15008 389 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 COL13A1Q5TAT6 717 aaPredicted RBP11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 CNKSR3Q6P9H4 555 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 SLC24A5Q71RS6 500 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 BRSK2Q8IWQ3 736 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 TRIM59Q8IWR1 403 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 TNS4Q8IZW8 715 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 RNF214Q8ND24 703 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 IQCDQ96DY2 449 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 ZNF668Q96K58 619 aaPredicted RBP11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 MFSD14AQ96MC6 490 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 ACAP3Q96P50 834 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 FNBP1Q96RU3 617 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 TUBGCP2Q9BSJ2 902 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 TSPYL2Q9H2G4 693 aaPredicted RBP11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 ELAC1Q9H777 363 aaKnown RBP11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 RPF1Q9H9Y2 349 aaKnown RBP11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 GRPEL1Q9HAV7 217 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 RGS18Q9NS28 235 aa11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 SAMSN1Q9NSI8 373 aaKnown RBP11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 RBAKQ9NYW8 714 aaPredicted RBP11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 CPSF3Q9UKF6 684 aaKnown RBP11.25□□□□□ -0.61
CLPTM1-207ENST00000587537 ABHD14A-ACY1A0A1B0GW23 586 aa11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 GTPBP10A4D1E9 387 aaKnown RBP11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 FAM189A1O60320 539 aa11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 CSDE1O75534 798 aaKnown RBP11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 EDN1P05305 212 aa11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 VAMP7P51809 220 aa11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 CLDN10P78369 228 aa11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 CYP24A1Q07973 514 aa11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 IKBKEQ14164 716 aa11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 FKBP15Q5T1M5 1219 aa11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 MRPL10Q7Z7H8 261 aaKnown RBP11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 IRF2BP1Q8IU81 584 aa11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 WDR49Q8IV35 697 aa11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 CACTINQ8WUQ7 758 aaKnown RBP11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 CPB2Q96IY4 423 aa11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 FAM213AQ9BRX8 229 aa11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 PCIF1Q9H4Z3 704 aa11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 AGO3Q9H9G7 860 aaKnown RBP11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 FAM105AQ9NUU6 356 aa11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 GIT1Q9Y2X7 761 aa11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 C2CD2Q9Y426 696 aa11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 NR2E3Q9Y5X4 410 aa11.24□□□□□ -0.61
CLPTM1-207ENST00000587537 EVI5O60447 810 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 NBNO60934 754 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 NPTXRO95502 500 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 AFPP02771 609 aaKnown RBP11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 STAG3L1P0CL83 205 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 PAX3P23760 479 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 UBASH3AP57075 661 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 FAM189BP81408 668 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 FANCCQ00597 558 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 MBTPS1Q14703 1052 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 KRT31Q15323 416 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 VWA3BQ502W6 1294 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 EEF1DP3Q658K8 133 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 ZBTB33Q86T24 672 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 THNSL1Q8IYQ7 743 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 PARD3BQ8TEW8 1205 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 BORCS6Q96GS4 357 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 ZBTB45Q96K62 511 aaPredicted RBP11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 FAM81BQ96LP2 452 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 ADAM2Q99965 735 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 PPP1R12CQ9BZL4 782 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 WNT8AQ9H1J5 351 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 HSD3B7Q9H2F3 369 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 MTIF3Q9H2K0 278 aaKnown RBP11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 NDST4Q9H3R1 872 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 PRDM5Q9NQX1 630 aaPredicted RBP11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 SLC38A7Q9NVC3 462 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 PCDHB2Q9Y5E7 798 aa11.23□□□□□ -0.61
CLPTM1-207ENST00000587537 A0A1B0GTH6 734 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 CCDC85CA6NKD9 419 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 TTLL13PA6NNM8 815 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 LGALS16A8MUM7 142 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 TISP43B9A030 160 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 INPPL1O15357 1258 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 HARSP12081 509 aaKnown RBP11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 ITGA4P13612 1032 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 KCNE1P15382 129 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 FGFR4P22455 802 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 CYP2C18P33260 490 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 CASP4P49662 377 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 ACOT2P49753 483 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 COPB1P53618 953 aaKnown RBP11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 UBXN11Q5T124 520 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 TCERG1LQ5VWI1 586 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 PSRC1Q6PGN9 363 aaPredicted RBP11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 CRELD2Q6UXH1 353 aaPredicted RBP11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 CBWD2Q8IUF1 395 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 DBF4BQ8NFT6 615 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 SLC35C1Q96A29 364 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 SAAL1Q96ER3 474 aa11.22□□□□□ -0.61
CLPTM1-207ENST00000587537 MRFAP1L1Q96HT8 127 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms