RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 CT47A1Q5JQC4 288 aaPredicted RBP17.63■□□□□ 0.41
ATG4D-205ENST00000586477 UBXN11Q5T124 520 aa17.63■□□□□ 0.41
ATG4D-205ENST00000586477 CATSPER4Q7RTX7 472 aa17.63■□□□□ 0.41
ATG4D-205ENST00000586477 ADGRD2Q7Z7M1 963 aa17.63■□□□□ 0.41
ATG4D-205ENST00000586477 MLKLQ8NB16 471 aa17.63■□□□□ 0.41
ATG4D-205ENST00000586477 RNF169Q8NCN4 708 aa17.63■□□□□ 0.41
ATG4D-205ENST00000586477 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.63■□□□□ 0.41
ATG4D-205ENST00000586477 HELQQ8TDG4 1101 aa17.63■□□□□ 0.41
ATG4D-205ENST00000586477 POF1BQ8WVV4 589 aa17.63■□□□□ 0.41
ATG4D-205ENST00000586477 ACCSQ96QU6 501 aa17.63■□□□□ 0.41
ATG4D-205ENST00000586477 SLC39A2Q9NP94 309 aa17.63■□□□□ 0.41
ATG4D-205ENST00000586477 ANO10Q9NW15 660 aa17.63■□□□□ 0.41
ATG4D-205ENST00000586477 RNF216Q9NWF9 866 aaPredicted RBP17.63■□□□□ 0.41
ATG4D-205ENST00000586477 PSMA7O14818 248 aa17.62■□□□□ 0.41
ATG4D-205ENST00000586477 CCDC192P0DO97 292 aa17.62■□□□□ 0.41
ATG4D-205ENST00000586477 KCNA5P22460 613 aa17.62■□□□□ 0.41
ATG4D-205ENST00000586477 AXLP30530 894 aa17.62■□□□□ 0.41
ATG4D-205ENST00000586477 PBX3P40426 434 aa17.62■□□□□ 0.41
ATG4D-205ENST00000586477 SNRPFP62306 86 aaKnown RBP17.62■□□□□ 0.41
ATG4D-205ENST00000586477 AMHR2Q16671 573 aa17.62■□□□□ 0.41
ATG4D-205ENST00000586477 FAM187BQ17R55 369 aa17.62■□□□□ 0.41
ATG4D-205ENST00000586477 BMT2Q1RMZ1 405 aa17.62■□□□□ 0.41
ATG4D-205ENST00000586477 L1TD1Q5T7N2 865 aaKnown RBP17.62■□□□□ 0.41
ATG4D-205ENST00000586477 PPP4R3CPQ6ZMV5 832 aa17.62■□□□□ 0.41
ATG4D-205ENST00000586477 GUF1Q8N442 669 aaKnown RBP17.62■□□□□ 0.41
ATG4D-205ENST00000586477 GOLGA5Q8TBA6 731 aa17.62■□□□□ 0.41
ATG4D-205ENST00000586477 PABPC5Q96DU9 382 aaKnown RBP17.62■□□□□ 0.41
ATG4D-205ENST00000586477 MRPL4Q9BYD3 311 aaKnown RBP17.62■□□□□ 0.41
ATG4D-205ENST00000586477 POLD4Q9HCU8 107 aa17.62■□□□□ 0.41
ATG4D-205ENST00000586477 FAM105AQ9NUU6 356 aa17.62■□□□□ 0.41
ATG4D-205ENST00000586477 TBC1D7Q9P0N9 293 aa17.62■□□□□ 0.41
ATG4D-205ENST00000586477 CGNQ9P2M7 1197 aaKnown RBP17.62■□□□□ 0.41
ATG4D-205ENST00000586477 ACKR2O00590 384 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 LINC01565O15544 149 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 HOXA2O43364 376 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 ZNF623O75123 536 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 PPP1R37O75864 691 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 FGF18O76093 207 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 PRKCBP05771 671 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 NMT1P30419 496 aaKnown RBP17.61■□□□□ 0.41
ATG4D-205ENST00000586477 NLRP12P59046 1061 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 ERVFC1P60507 584 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 MBTD1Q05BQ5 628 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 DLX2Q07687 328 aaPredicted RBP17.61■□□□□ 0.41
ATG4D-205ENST00000586477 STK4Q13043 487 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 STX1AQ16623 288 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 TMEM132AQ24JP5 1023 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 LEXMQ3ZCV2 418 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 TWF2Q6IBS0 349 aaKnown RBP17.61■□□□□ 0.41
ATG4D-205ENST00000586477 ZPBP2Q6X784 338 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 HS2ST1Q7LGA3 356 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 MAP4K3Q8IVH8 894 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 SYCP3Q8IZU3 236 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 ZNF507Q8TCN5 953 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 ERCC4Q92889 916 aaPredicted RBP17.61■□□□□ 0.41
ATG4D-205ENST00000586477 CCDC51Q96ER9 411 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 FIZ1Q96SL8 496 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 NAT10Q9H0A0 1025 aaKnown RBP17.61■□□□□ 0.41
ATG4D-205ENST00000586477 FZD8Q9H461 694 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 TBX20Q9UMR3 447 aa17.61■□□□□ 0.41
ATG4D-205ENST00000586477 H3BQ06 376 aaPredicted RBP17.6■□□□□ 0.41
ATG4D-205ENST00000586477 BIN1O00499 593 aa17.6■□□□□ 0.41
ATG4D-205ENST00000586477 B4GALT3O60512 393 aa17.6■□□□□ 0.41
ATG4D-205ENST00000586477 TSPAN1O60635 241 aa17.6■□□□□ 0.41
ATG4D-205ENST00000586477 CAVIN2O95810 425 aa17.6■□□□□ 0.41
ATG4D-205ENST00000586477 LAG3P18627 525 aa17.6■□□□□ 0.41
ATG4D-205ENST00000586477 AFF1P51825 1210 aaKnown RBP17.6■□□□□ 0.41
ATG4D-205ENST00000586477 PRPF4BQ13523 1007 aaKnown RBP17.6■□□□□ 0.41
ATG4D-205ENST00000586477 ZSCAN23Q3MJ62 389 aa17.6■□□□□ 0.41
ATG4D-205ENST00000586477 SPOUT1Q5T280 376 aaKnown RBP17.6■□□□□ 0.41
ATG4D-205ENST00000586477 AGMOQ6ZNB7 445 aa17.6■□□□□ 0.41
ATG4D-205ENST00000586477 EPM2AIP1Q7L775 607 aaPredicted RBP17.6■□□□□ 0.41
ATG4D-205ENST00000586477 MRPL10Q7Z7H8 261 aaKnown RBP17.6■□□□□ 0.41
ATG4D-205ENST00000586477 LRRC43Q8N309 656 aa17.6■□□□□ 0.41
ATG4D-205ENST00000586477 KIAA0895Q8NCT3 520 aa17.6■□□□□ 0.41
ATG4D-205ENST00000586477 BICD1Q96G01 975 aa17.6■□□□□ 0.41
ATG4D-205ENST00000586477 DHTKD1Q96HY7 919 aaPredicted RBP17.6■□□□□ 0.41
ATG4D-205ENST00000586477 KIFC3Q9BVG8 833 aa17.6■□□□□ 0.41
ATG4D-205ENST00000586477 STRA6Q9BX79 667 aa17.6■□□□□ 0.41
ATG4D-205ENST00000586477 CCDC113Q9H0I3 377 aa17.6■□□□□ 0.41
ATG4D-205ENST00000586477 PCDHB12Q9Y5F1 795 aa17.6■□□□□ 0.41
ATG4D-205ENST00000586477 CNTNAP2Q9UHC6 1331 aa17.59■□□□□ 0.41
ATG4D-205ENST00000586477 BICDL2A1A5D9 508 aa17.59■□□□□ 0.41
ATG4D-205ENST00000586477 FSCN2O14926 492 aa17.59■□□□□ 0.41
ATG4D-205ENST00000586477 HNRNPDLO14979 420 aaKnown RBP17.59■□□□□ 0.41
ATG4D-205ENST00000586477 TBX10O75333 385 aa17.59■□□□□ 0.41
ATG4D-205ENST00000586477 LIG4P49917 911 aa17.59■□□□□ 0.41
ATG4D-205ENST00000586477 KNOP1Q1ED39 458 aaKnown RBP17.59■□□□□ 0.41
ATG4D-205ENST00000586477 SLFN12LQ6IEE8 588 aa17.59■□□□□ 0.41
ATG4D-205ENST00000586477 KCNT2Q6UVM3 1135 aa17.59■□□□□ 0.41
ATG4D-205ENST00000586477 SMG8Q8ND04 991 aaKnown RBP17.59■□□□□ 0.41
ATG4D-205ENST00000586477 TSG101Q99816 390 aa17.59■□□□□ 0.41
ATG4D-205ENST00000586477 ADPGKQ9BRR6 497 aa17.59■□□□□ 0.41
ATG4D-205ENST00000586477 EIF2AQ9BY44 585 aaKnown RBP17.59■□□□□ 0.41
ATG4D-205ENST00000586477 GBP3Q9H0R5 595 aa17.59■□□□□ 0.41
ATG4D-205ENST00000586477 PCDHB2Q9Y5E7 798 aa17.59■□□□□ 0.41
ATG4D-205ENST00000586477 SYCE3A1L190 88 aa17.58■□□□□ 0.4
ATG4D-205ENST00000586477 N4BP3O15049 544 aa17.58■□□□□ 0.4
ATG4D-205ENST00000586477 KIAA0391O15091 583 aaKnown RBP17.58■□□□□ 0.4
ATG4D-205ENST00000586477 B4GALT5O43286 388 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms