RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 EXOC3O60645 756 aa14.84□□□□□ -0.03
VMP1-203ENST00000586245 ATF7P17544 494 aaPredicted RBP14.84□□□□□ -0.03
VMP1-203ENST00000586245 NR2F2P24468 414 aa14.84□□□□□ -0.03
VMP1-203ENST00000586245 AKAP5P24588 427 aa14.84□□□□□ -0.03
VMP1-203ENST00000586245 ACOT2P49753 483 aa14.84□□□□□ -0.03
VMP1-203ENST00000586245 PMS1P54277 932 aaKnown RBP14.84□□□□□ -0.03
VMP1-203ENST00000586245 FKBP3Q00688 224 aaKnown RBP14.84□□□□□ -0.03
VMP1-203ENST00000586245 ADAM9Q13443 819 aa14.84□□□□□ -0.03
VMP1-203ENST00000586245 TPD52L1Q16890 204 aaPredicted RBP14.84□□□□□ -0.03
VMP1-203ENST00000586245 SEZ6Q53EL9 994 aa14.84□□□□□ -0.03
VMP1-203ENST00000586245 C9orf50Q5SZB4 431 aa14.84□□□□□ -0.03
VMP1-203ENST00000586245 CEP135Q66GS9 1140 aa14.84□□□□□ -0.03
VMP1-203ENST00000586245 FOXR2Q6PJQ5 311 aa14.84□□□□□ -0.03
VMP1-203ENST00000586245 ZNF598Q86UK7 904 aaKnown RBP14.84□□□□□ -0.03
VMP1-203ENST00000586245 ABI1Q8IZP0 508 aa14.84□□□□□ -0.03
VMP1-203ENST00000586245 PHOSPHO2Q8TCD6 241 aa14.84□□□□□ -0.03
VMP1-203ENST00000586245 TMEM174Q8WUU8 243 aa14.84□□□□□ -0.03
VMP1-203ENST00000586245 LPPQ93052 612 aa14.84□□□□□ -0.03
VMP1-203ENST00000586245 DNAJC25Q9H1X3 360 aa14.84□□□□□ -0.03
VMP1-203ENST00000586245 RPF1Q9H9Y2 349 aaKnown RBP14.84□□□□□ -0.03
VMP1-203ENST00000586245 RSAD1Q9HA92 442 aa14.84□□□□□ -0.03
VMP1-203ENST00000586245 DMAC2Q9NW81 257 aa14.84□□□□□ -0.03
VMP1-203ENST00000586245 CXXC1Q9P0U4 656 aaPredicted RBP14.84□□□□□ -0.03
VMP1-203ENST00000586245 FRMD4BQ9Y2L6 1034 aa14.84□□□□□ -0.03
VMP1-203ENST00000586245 GIT1Q9Y2X7 761 aa14.84□□□□□ -0.03
VMP1-203ENST00000586245 ZNF233A6NK53 670 aa14.83□□□□□ -0.04
VMP1-203ENST00000586245 TULP1O00294 542 aaPredicted RBP14.83□□□□□ -0.04
VMP1-203ENST00000586245 RECQL4O94761 1208 aa14.83□□□□□ -0.04
VMP1-203ENST00000586245 FGFR1OPO95684 399 aaKnown RBP14.83□□□□□ -0.04
VMP1-203ENST00000586245 FGFR1P11362 822 aa14.83□□□□□ -0.04
VMP1-203ENST00000586245 ATP2A2P16615 1042 aaKnown RBP14.83□□□□□ -0.04
VMP1-203ENST00000586245 TNFSF9P41273 254 aa14.83□□□□□ -0.04
VMP1-203ENST00000586245 ANO6Q4KMQ2 910 aa14.83□□□□□ -0.04
VMP1-203ENST00000586245 RASIP1Q5U651 963 aa14.83□□□□□ -0.04
VMP1-203ENST00000586245 TTI2Q6NXR4 508 aa14.83□□□□□ -0.04
VMP1-203ENST00000586245 FAM117BQ6P1L5 589 aa14.83□□□□□ -0.04
VMP1-203ENST00000586245 GLB1LQ6UWU2 654 aa14.83□□□□□ -0.04
VMP1-203ENST00000586245 CHRDL2Q6WN34 429 aa14.83□□□□□ -0.04
VMP1-203ENST00000586245 AGMOQ6ZNB7 445 aa14.83□□□□□ -0.04
VMP1-203ENST00000586245 C11orf57Q6ZUT1 292 aaPredicted RBP14.83□□□□□ -0.04
VMP1-203ENST00000586245 CSGALNACT2Q8N6G5 542 aa14.83□□□□□ -0.04
VMP1-203ENST00000586245 RDH13Q8NBN7 331 aa14.83□□□□□ -0.04
VMP1-203ENST00000586245 RSPH1Q8WYR4 309 aa14.83□□□□□ -0.04
VMP1-203ENST00000586245 FAM212AQ96EL1 285 aa14.83□□□□□ -0.04
VMP1-203ENST00000586245 RPS6KC1Q96S38 1066 aa14.83□□□□□ -0.04
VMP1-203ENST00000586245 ZBED2Q9BTP6 218 aa14.83□□□□□ -0.04
VMP1-203ENST00000586245 FUCA2Q9BTY2 467 aa14.83□□□□□ -0.04
VMP1-203ENST00000586245 RNF39Q9H2S5 420 aa14.83□□□□□ -0.04
VMP1-203ENST00000586245 CPSF3Q9UKF6 684 aaKnown RBP14.83□□□□□ -0.04
VMP1-203ENST00000586245 FAM189A1O60320 539 aa14.82□□□□□ -0.04
VMP1-203ENST00000586245 CXCL8P10145 99 aa14.82□□□□□ -0.04
VMP1-203ENST00000586245 POU5F1Q01860 360 aaKnown RBP14.82□□□□□ -0.04
VMP1-203ENST00000586245 PPP2R3AQ06190 1150 aa14.82□□□□□ -0.04
VMP1-203ENST00000586245 SNRNP35Q16560 246 aaKnown RBP14.82□□□□□ -0.04
VMP1-203ENST00000586245 ZBTB41Q5SVQ8 909 aa14.82□□□□□ -0.04
VMP1-203ENST00000586245 TMEM192Q8IY95 271 aa14.82□□□□□ -0.04
VMP1-203ENST00000586245 URGCPQ8TCY9 931 aa14.82□□□□□ -0.04
VMP1-203ENST00000586245 HELQQ8TDG4 1101 aa14.82□□□□□ -0.04
VMP1-203ENST00000586245 CEP63Q96MT8 703 aa14.82□□□□□ -0.04
VMP1-203ENST00000586245 DUSP9Q99956 384 aaKnown RBP14.82□□□□□ -0.04
VMP1-203ENST00000586245 ANP32EQ9BTT0 268 aa14.82□□□□□ -0.04
VMP1-203ENST00000586245 PLEKHA5Q9HAU0 1116 aa14.82□□□□□ -0.04
VMP1-203ENST00000586245 RBAKQ9NYW8 714 aaPredicted RBP14.82□□□□□ -0.04
VMP1-203ENST00000586245 KLK14Q9P0G3 267 aa14.82□□□□□ -0.04
VMP1-203ENST00000586245 INPP5FQ9Y2H2 1132 aa14.82□□□□□ -0.04
VMP1-203ENST00000586245 TNRC18O15417 2968 aaPredicted RBP14.81□□□□□ -0.04
VMP1-203ENST00000586245 MEIS3P2A8K0S8 358 aa14.81□□□□□ -0.04
VMP1-203ENST00000586245 OFD1O75665 1012 aa14.81□□□□□ -0.04
VMP1-203ENST00000586245 DGKIO75912 1065 aa14.81□□□□□ -0.04
VMP1-203ENST00000586245 IL18RAPO95256 599 aa14.81□□□□□ -0.04
VMP1-203ENST00000586245 GJB5O95377 273 aa14.81□□□□□ -0.04
VMP1-203ENST00000586245 EPB41P11171 864 aaKnown RBP14.81□□□□□ -0.04
VMP1-203ENST00000586245 PSMC2P35998 433 aaKnown RBP14.81□□□□□ -0.04
VMP1-203ENST00000586245 MLH1P40692 756 aa14.81□□□□□ -0.04
VMP1-203ENST00000586245 ENOX2Q16206 610 aaKnown RBP14.81□□□□□ -0.04
VMP1-203ENST00000586245 LRSAM1Q6UWE0 723 aa14.81□□□□□ -0.04
VMP1-203ENST00000586245 CRELD2Q6UXH1 353 aaPredicted RBP14.81□□□□□ -0.04
VMP1-203ENST00000586245 TMCO2Q7Z6W1 182 aaPredicted RBP14.81□□□□□ -0.04
VMP1-203ENST00000586245 CBWD2Q8IUF1 395 aa14.81□□□□□ -0.04
VMP1-203ENST00000586245 HERC6Q8IVU3 1022 aa14.81□□□□□ -0.04
VMP1-203ENST00000586245 BRSK2Q8IWQ3 736 aa14.81□□□□□ -0.04
VMP1-203ENST00000586245 CD302Q8IX05 232 aa14.81□□□□□ -0.04
VMP1-203ENST00000586245 ZC3H3Q8IXZ2 948 aaKnown RBP14.81□□□□□ -0.04
VMP1-203ENST00000586245 FAM186BQ8IYM0 893 aa14.81□□□□□ -0.04
VMP1-203ENST00000586245 TDHQ8IZJ6 230 aa14.81□□□□□ -0.04
VMP1-203ENST00000586245 CRIPAKQ8N1N5 446 aa14.81□□□□□ -0.04
VMP1-203ENST00000586245 ZSWIM2Q8NEG5 633 aa14.81□□□□□ -0.04
VMP1-203ENST00000586245 SNX27Q96L92 541 aa14.81□□□□□ -0.04
VMP1-203ENST00000586245 FBXL18Q96ME1 805 aa14.81□□□□□ -0.04
VMP1-203ENST00000586245 YME1L1Q96TA2 773 aa14.81□□□□□ -0.04
VMP1-203ENST00000586245 GAD1Q99259 594 aa14.81□□□□□ -0.04
VMP1-203ENST00000586245 SRRTQ9BXP5 876 aaKnown RBP14.81□□□□□ -0.04
VMP1-203ENST00000586245 TMEM117Q9H0C3 514 aa14.81□□□□□ -0.04
VMP1-203ENST00000586245 TTC3P53804 2025 aa14.8□□□□□ -0.04
VMP1-203ENST00000586245 PDE4DIPQ5VU43 2346 aa14.8□□□□□ -0.04
VMP1-203ENST00000586245 CEP290O15078 2479 aa14.8□□□□□ -0.04
VMP1-203ENST00000586245 ARL5CA6NH57 179 aa14.8□□□□□ -0.04
VMP1-203ENST00000586245 TBKBP1A7MCY6 615 aa14.8□□□□□ -0.04
VMP1-203ENST00000586245 MAPK13O15264 365 aa14.8□□□□□ -0.04
VMP1-203ENST00000586245 SLC16A3O15427 465 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms