RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 SPAG5Q96R06 1193 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 CRACR2AQ9BSW2 395 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 TUBB2BQ9BVA1 445 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 TSGA10Q9BZW7 698 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 UPF3AQ9H1J1 476 aaKnown RBP11.28□□□□□ -0.6
LIG3-203ENST00000585370 DEF6Q9H4E7 631 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 PCIF1Q9H4Z3 704 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 GCNT4Q9P109 453 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 TBX21Q9UL17 535 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 TRPC6Q9Y210 931 aa11.28□□□□□ -0.6
LIG3-203ENST00000585370 TTC28Q96AY4 2481 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 RRN3P2A6NIE6 340 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 ARVCFO00192 962 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 EPHB6O15197 1021 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 KRT86O43790 486 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 AKR1B10O60218 316 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 KIF5CO60282 957 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 GFPT2O94808 682 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 SLC9A1P19634 815 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 ADSSP30520 456 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 MYL7Q01449 175 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 TNFAIP2Q03169 654 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 MTF1Q14872 753 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 ASIC2Q16515 512 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 C10orf76Q5T2E6 689 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 CDCA2Q69YH5 1023 aaPredicted RBP11.27□□□□□ -0.61
LIG3-203ENST00000585370 DPY19L2P1Q6NXN4 242 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 TRIM65Q6PJ69 517 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 C16orf59Q7L2K0 433 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 TAS1R3Q7RTX0 852 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 RDH13Q8NBN7 331 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 OR6J1Q8NGC5 347 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 PARD3BQ8TEW8 1205 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 AFG1LQ8WV93 481 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 COL25A1Q9BXS0 654 aaPredicted RBP11.27□□□□□ -0.61
LIG3-203ENST00000585370 NFKBIZQ9BYH8 718 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 STK33Q9BYT3 514 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 SPC25Q9HBM1 224 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 SUCLA2Q9P2R7 463 aaPredicted RBP11.27□□□□□ -0.61
LIG3-203ENST00000585370 DOCK5Q9H7D0 1870 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 CHD7Q9P2D1 2997 aa11.27□□□□□ -0.61
LIG3-203ENST00000585370 ARID2Q68CP9 1835 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 MYO9BQ13459 2157 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 ZBTB42B2RXF5 422 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 H3BRB1 525 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 FERP16591 822 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 SMPD1P17405 629 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 MARK3P27448 753 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 EIF4A3P38919 411 aaKnown RBP11.26□□□□□ -0.61
LIG3-203ENST00000585370 PRKCIP41743 596 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 STAT1P42224 750 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 AP3M2P53677 418 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 BEX3Q00994 111 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 POU5F1Q01860 360 aaKnown RBP11.26□□□□□ -0.61
LIG3-203ENST00000585370 CYP24A1Q07973 514 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 LAMTOR4Q0VGL1 99 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 CAPSQ13938 189 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 SURF1Q15526 300 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 MAPK6Q16659 721 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 KRT39Q6A163 491 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 MFSD5Q6N075 450 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 EFCAB12Q6NXP0 572 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 KIAA1328Q86T90 577 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 VPS36Q86VN1 386 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 ZNF710Q8N1W2 664 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 MYRIPQ8NFW9 859 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 MYLIPQ8WY64 445 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 DESI2Q9BSY9 194 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 KIFC3Q9BVG8 833 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 MRPL4Q9BYD3 311 aaKnown RBP11.26□□□□□ -0.61
LIG3-203ENST00000585370 INTS2Q9H0H0 1204 aaKnown RBP11.26□□□□□ -0.61
LIG3-203ENST00000585370 IKZF4Q9H2S9 585 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 TUT1Q9H6E5 874 aaKnown RBP11.26□□□□□ -0.61
LIG3-203ENST00000585370 SUGCTQ9HAC7 445 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 TMEM8AQ9HCN3 771 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 SIX2Q9NPC8 291 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 NLRC4Q9NPP4 1024 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 AGO2Q9UKV8 859 aaKnown RBP11.26□□□□□ -0.61
LIG3-203ENST00000585370 GNEQ9Y223 722 aaKnown RBP11.26□□□□□ -0.61
LIG3-203ENST00000585370 COQ4Q9Y3A0 265 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 ADGRA3Q8IWK6 1321 aa11.26□□□□□ -0.61
LIG3-203ENST00000585370 A0A0B4J269 797 aa11.25□□□□□ -0.61
LIG3-203ENST00000585370 A0A0U1RQG5 324 aaPredicted RBP11.25□□□□□ -0.61
LIG3-203ENST00000585370 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.25□□□□□ -0.61
LIG3-203ENST00000585370 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.25□□□□□ -0.61
LIG3-203ENST00000585370 A6NJR5 290 aa11.25□□□□□ -0.61
LIG3-203ENST00000585370 RBAK-RBAKDNI3L0D1 243 aa11.25□□□□□ -0.61
LIG3-203ENST00000585370 KPNA6O60684 536 aa11.25□□□□□ -0.61
LIG3-203ENST00000585370 ZC3H11AO75152 810 aaKnown RBP eCLIP11.25□□□□□ -0.61
LIG3-203ENST00000585370 TOM1L1O75674 476 aa11.25□□□□□ -0.61
LIG3-203ENST00000585370 INSRRP14616 1297 aa11.25□□□□□ -0.61
LIG3-203ENST00000585370 CASQ1P31415 396 aa11.25□□□□□ -0.61
LIG3-203ENST00000585370 MXI1P50539 228 aa11.25□□□□□ -0.61
LIG3-203ENST00000585370 KIF11P52732 1056 aa11.25□□□□□ -0.61
LIG3-203ENST00000585370 VAV2P52735 878 aa11.25□□□□□ -0.61
LIG3-203ENST00000585370 JAM2P57087 298 aa11.25□□□□□ -0.61
LIG3-203ENST00000585370 PTENP60484 403 aa11.25□□□□□ -0.61
LIG3-203ENST00000585370 GNG11P61952 73 aa11.25□□□□□ -0.61
LIG3-203ENST00000585370 CLDN10P78369 228 aa11.25□□□□□ -0.61
LIG3-203ENST00000585370 KLHL30Q0D2K2 578 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms