RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 HSP90AA2PQ14568 343 aaPredicted RBP22.54■■□□□ 1.2
TOP3A-219ENST00000584887 USP41Q3LFD5 358 aa22.54■■□□□ 1.2
TOP3A-219ENST00000584887 EEF1DP3Q658K8 133 aa22.54■■□□□ 1.2
TOP3A-219ENST00000584887 C4orf32Q8N8J7 132 aa22.54■■□□□ 1.2
TOP3A-219ENST00000584887 RAB34Q9BZG1 259 aa22.54■■□□□ 1.2
TOP3A-219ENST00000584887 CCDC113Q9H0I3 377 aa22.54■■□□□ 1.2
TOP3A-219ENST00000584887 RXFP1Q9HBX9 757 aa22.54■■□□□ 1.2
TOP3A-219ENST00000584887 DDX19AQ9NUU7 478 aaKnown RBP22.54■■□□□ 1.2
TOP3A-219ENST00000584887 DPP7Q9UHL4 492 aa22.54■■□□□ 1.2
TOP3A-219ENST00000584887 GDAQ9Y2T3 454 aa22.54■■□□□ 1.2
TOP3A-219ENST00000584887 PCDHB6Q9Y5E3 794 aa22.54■■□□□ 1.2
TOP3A-219ENST00000584887 PLXNA3P51805 1871 aa22.54■■□□□ 1.2
TOP3A-219ENST00000584887 C2orf16Q68DN1 1984 aa22.53■■□□□ 1.2
TOP3A-219ENST00000584887 ACKR2O00590 384 aa22.53■■□□□ 1.2
TOP3A-219ENST00000584887 EFEMP2O95967 443 aa22.53■■□□□ 1.2
TOP3A-219ENST00000584887 RPL17P18621 184 aaKnown RBP22.53■■□□□ 1.2
TOP3A-219ENST00000584887 MUTP22033 750 aa22.53■■□□□ 1.2
TOP3A-219ENST00000584887 AVPR2P30518 371 aa22.53■■□□□ 1.2
TOP3A-219ENST00000584887 PTPN5P54829 565 aa22.53■■□□□ 1.2
TOP3A-219ENST00000584887 TUSC3Q13454 348 aa22.53■■□□□ 1.2
TOP3A-219ENST00000584887 MCTP1Q6DN14 999 aa22.53■■□□□ 1.2
TOP3A-219ENST00000584887 C15orf39Q6ZRI6 1047 aa22.53■■□□□ 1.2
TOP3A-219ENST00000584887 SMG7Q92540 1137 aaKnown RBP22.53■■□□□ 1.2
TOP3A-219ENST00000584887 KIFAP3Q92845 792 aa22.53■■□□□ 1.2
TOP3A-219ENST00000584887 PRRX2Q99811 253 aa22.53■■□□□ 1.2
TOP3A-219ENST00000584887 PAAF1Q9BRP4 392 aa22.53■■□□□ 1.2
TOP3A-219ENST00000584887 DENND4AQ7Z401 1863 aa22.53■■□□□ 1.2
TOP3A-219ENST00000584887 SF3B1O75533 1304 aaKnown RBP eCLIP22.53■■□□□ 1.28e-6■■■■■ 107
TOP3A-219ENST00000584887 KMT2EQ8IZD2 1858 aa22.52■■□□□ 1.2
TOP3A-219ENST00000584887 RFPL2O75678 378 aa22.52■■□□□ 1.2
TOP3A-219ENST00000584887 EDN1P05305 212 aa22.52■■□□□ 1.2
TOP3A-219ENST00000584887 U2AF2P26368 475 aaKnown RBP eCLIP22.52■■□□□ 1.2
TOP3A-219ENST00000584887 TOB1P50616 345 aaPredicted RBP22.52■■□□□ 1.2
TOP3A-219ENST00000584887 PRSS55Q6UWB4 352 aaPredicted RBP22.52■■□□□ 1.2
TOP3A-219ENST00000584887 CMASQ8NFW8 434 aaPredicted RBP22.52■■□□□ 1.2
TOP3A-219ENST00000584887 PIDD1Q9HB75 910 aa22.52■■□□□ 1.2
TOP3A-219ENST00000584887 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.52■■□□□ 1.2
TOP3A-219ENST00000584887 CHST7Q9NS84 486 aa22.52■■□□□ 1.2
TOP3A-219ENST00000584887 CACNA1HO95180 2353 aa22.52■■□□□ 1.19
TOP3A-219ENST00000584887 CCDC169A6NNP5 214 aa22.51■■□□□ 1.19
TOP3A-219ENST00000584887 PP2D1A8MPX8 630 aa22.51■■□□□ 1.19
TOP3A-219ENST00000584887 PTGESO14684 152 aa22.51■■□□□ 1.19
TOP3A-219ENST00000584887 KIF4AO95239 1232 aa22.51■■□□□ 1.19
TOP3A-219ENST00000584887 THP07101 528 aa22.51■■□□□ 1.19
TOP3A-219ENST00000584887 GBP2P32456 591 aaPredicted RBP22.51■■□□□ 1.19
TOP3A-219ENST00000584887 EFNA5P52803 228 aa22.51■■□□□ 1.19
TOP3A-219ENST00000584887 ZRSR1Q15695 479 aaKnown RBP22.51■■□□□ 1.19
TOP3A-219ENST00000584887 DCAF4L1Q3SXM0 396 aa22.51■■□□□ 1.19
TOP3A-219ENST00000584887 CEP57Q86XR8 500 aa22.51■■□□□ 1.19
TOP3A-219ENST00000584887 CXCL16Q9H2A7 254 aa22.51■■□□□ 1.19
TOP3A-219ENST00000584887 MFSD1Q9H3U5 465 aa22.51■■□□□ 1.19
TOP3A-219ENST00000584887 KIF3AQ9Y496 699 aa22.51■■□□□ 1.19
TOP3A-219ENST00000584887 TGM5O43548 720 aa22.5■■□□□ 1.19
TOP3A-219ENST00000584887 CREMQ03060 361 aa22.5■■□□□ 1.19
TOP3A-219ENST00000584887 RABEP1Q15276 862 aa22.5■■□□□ 1.19
TOP3A-219ENST00000584887 RTP2Q5QGT7 225 aa22.5■■□□□ 1.19
TOP3A-219ENST00000584887 ATF7IP2Q5U623 682 aa22.5■■□□□ 1.19
TOP3A-219ENST00000584887 FAM171A1Q5VUB5 890 aa22.5■■□□□ 1.19
TOP3A-219ENST00000584887 KRT79Q5XKE5 535 aa22.5■■□□□ 1.19
TOP3A-219ENST00000584887 PHOX2BQ99453 314 aa22.5■■□□□ 1.19
TOP3A-219ENST00000584887 DNM3Q9UQ16 869 aa22.5■■□□□ 1.19
TOP3A-219ENST00000584887 STK24Q9Y6E0 443 aa22.5■■□□□ 1.19
TOP3A-219ENST00000584887 CLUHO75153 1309 aa22.5■■□□□ 1.19
TOP3A-219ENST00000584887 E9PMD0 336 aa22.49■■□□□ 1.19
TOP3A-219ENST00000584887 ST18O60284 1047 aa22.49■■□□□ 1.19
TOP3A-219ENST00000584887 CDC25AP30304 524 aa22.49■■□□□ 1.19
TOP3A-219ENST00000584887 TCF15Q12870 199 aa22.49■■□□□ 1.19
TOP3A-219ENST00000584887 PDIA5Q14554 519 aa22.49■■□□□ 1.19
TOP3A-219ENST00000584887 GLRA4Q5JXX5 417 aa22.49■■□□□ 1.19
TOP3A-219ENST00000584887 NT5DC1Q5TFE4 455 aa22.49■■□□□ 1.19
TOP3A-219ENST00000584887 APBB1IPQ7Z5R6 666 aaPredicted RBP22.49■■□□□ 1.19
TOP3A-219ENST00000584887 IGSF22Q8N9C0 903 aa22.49■■□□□ 1.19
TOP3A-219ENST00000584887 STAMQ92783 540 aa22.49■■□□□ 1.19
TOP3A-219ENST00000584887 TTPALQ9BTX7 342 aa22.49■■□□□ 1.19
TOP3A-219ENST00000584887 FNIP2Q9P278 1114 aa22.49■■□□□ 1.19
TOP3A-219ENST00000584887 K7ERI5 159 aa22.48■■□□□ 1.19
TOP3A-219ENST00000584887 PEX3P56589 373 aa22.48■■□□□ 1.19
TOP3A-219ENST00000584887 DTHD1Q6ZMT9 781 aa22.48■■□□□ 1.19
TOP3A-219ENST00000584887 RUSC1Q9BVN2 902 aa22.48■■□□□ 1.19
TOP3A-219ENST00000584887 PLEKHA4Q9H4M7 779 aa22.48■■□□□ 1.19
TOP3A-219ENST00000584887 WDR6Q9NNW5 1121 aaKnown RBP22.48■■□□□ 1.19
TOP3A-219ENST00000584887 FAM86C1Q9NVL1 165 aa22.48■■□□□ 1.19
TOP3A-219ENST00000584887 LAD1O00515 517 aa22.47■■□□□ 1.19
TOP3A-219ENST00000584887 HIP1RO75146 1068 aa22.47■■□□□ 1.19
TOP3A-219ENST00000584887 DMP1Q13316 513 aaPredicted RBP22.47■■□□□ 1.19
TOP3A-219ENST00000584887 TDGQ13569 410 aa22.47■■□□□ 1.19
TOP3A-219ENST00000584887 PSMD5Q16401 504 aa22.47■■□□□ 1.19
TOP3A-219ENST00000584887 GPR65Q8IYL9 337 aa22.47■■□□□ 1.19
TOP3A-219ENST00000584887 HDAC7Q8WUI4 952 aa22.47■■□□□ 1.19
TOP3A-219ENST00000584887 ZNF707Q96C28 371 aaPredicted RBP22.47■■□□□ 1.19
TOP3A-219ENST00000584887 KCNK12Q9HB15 430 aa22.47■■□□□ 1.19
TOP3A-219ENST00000584887 FBXL21Q9UKT6 434 aa22.47■■□□□ 1.19
TOP3A-219ENST00000584887 N4BP1O75113 896 aaKnown RBP22.46■■□□□ 1.19
TOP3A-219ENST00000584887 NPTX2P47972 431 aa22.46■■□□□ 1.19
TOP3A-219ENST00000584887 OSTNP61366 133 aa22.46■■□□□ 1.19
TOP3A-219ENST00000584887 ELAVL2Q12926 359 aaKnown RBP22.46■■□□□ 1.19
TOP3A-219ENST00000584887 IL17AQ16552 155 aa22.46■■□□□ 1.19
TOP3A-219ENST00000584887 ZNF568Q3ZCX4 644 aa22.46■■□□□ 1.19
TOP3A-219ENST00000584887 CYP26C1Q6V0L0 522 aa22.46■■□□□ 1.19
TOP3A-219ENST00000584887 GET4Q7L5D6 327 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms