RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 KRT39Q6A163 491 aa15.18■□□□□ 0.02
UBBP4-202ENST00000584755 CCDC127Q96BQ5 260 aa15.18■□□□□ 0.02
UBBP4-202ENST00000584755 PPP1R16BQ96T49 567 aa15.18■□□□□ 0.02
UBBP4-202ENST00000584755 TCHPQ9BT92 498 aa15.18■□□□□ 0.02
UBBP4-202ENST00000584755 INTS2Q9H0H0 1204 aaKnown RBP15.18■□□□□ 0.02
UBBP4-202ENST00000584755 PDZD7Q9H5P4 517 aa15.18■□□□□ 0.02
UBBP4-202ENST00000584755 CDHR5Q9HBB8 845 aa15.18■□□□□ 0.02
UBBP4-202ENST00000584755 RRAGDQ9NQL2 400 aaPredicted RBP15.18■□□□□ 0.02
UBBP4-202ENST00000584755 RBAKQ9NYW8 714 aaPredicted RBP15.18■□□□□ 0.02
UBBP4-202ENST00000584755 A0A1B0GUA9 196 aa15.17■□□□□ 0.02
UBBP4-202ENST00000584755 MOXD2PA6NHM9 499 aa15.17■□□□□ 0.02
UBBP4-202ENST00000584755 LRRC53A6NM62 1247 aa15.17■□□□□ 0.02
UBBP4-202ENST00000584755 CSDE1O75534 798 aaKnown RBP15.17■□□□□ 0.02
UBBP4-202ENST00000584755 RFX1P22670 979 aa15.17■□□□□ 0.02
UBBP4-202ENST00000584755 WNT7BP56706 349 aa15.17■□□□□ 0.02
UBBP4-202ENST00000584755 PTPN11Q06124 597 aaPredicted RBP15.17■□□□□ 0.02
UBBP4-202ENST00000584755 TSR1Q2NL82 804 aaKnown RBP15.17■□□□□ 0.02
UBBP4-202ENST00000584755 GDF6Q6KF10 455 aaPredicted RBP15.17■□□□□ 0.02
UBBP4-202ENST00000584755 RAD9BQ6WBX8 426 aa15.17■□□□□ 0.02
UBBP4-202ENST00000584755 RRAGAQ7L523 313 aa15.17■□□□□ 0.02
UBBP4-202ENST00000584755 CACNA2D4Q7Z3S7 1137 aa15.17■□□□□ 0.02
UBBP4-202ENST00000584755 SERINC5Q86VE9 423 aa15.17■□□□□ 0.02
UBBP4-202ENST00000584755 C17orf53Q8N3J3 647 aaPredicted RBP15.17■□□□□ 0.02
UBBP4-202ENST00000584755 SCLT1Q96NL6 688 aa15.17■□□□□ 0.02
UBBP4-202ENST00000584755 POP1Q99575 1024 aaKnown RBP15.17■□□□□ 0.02
UBBP4-202ENST00000584755 CGRRF1Q99675 332 aa15.17■□□□□ 0.02
UBBP4-202ENST00000584755 TOPORSQ9NS56 1045 aaPredicted RBP15.17■□□□□ 0.02
UBBP4-202ENST00000584755 TSKSQ9UJT2 592 aa15.17■□□□□ 0.02
UBBP4-202ENST00000584755 SOWAHDA6NJG2 315 aa15.16■□□□□ 0.02
UBBP4-202ENST00000584755 C4BPAP04003 597 aaKnown RBP15.16■□□□□ 0.02
UBBP4-202ENST00000584755 EIF4BP23588 611 aaKnown RBP15.16■□□□□ 0.02
UBBP4-202ENST00000584755 HOXA11P31270 313 aaPredicted RBP15.16■□□□□ 0.02
UBBP4-202ENST00000584755 TNFSF9P41273 254 aa15.16■□□□□ 0.02
UBBP4-202ENST00000584755 ACLYP53396 1101 aa15.16■□□□□ 0.02
UBBP4-202ENST00000584755 CRYBB1P53674 252 aaPredicted RBP15.16■□□□□ 0.02
UBBP4-202ENST00000584755 JAM2P57087 298 aa15.16■□□□□ 0.02
UBBP4-202ENST00000584755 TMEM62Q0P6H9 643 aa15.16■□□□□ 0.02
UBBP4-202ENST00000584755 SNX17Q15036 470 aa15.16■□□□□ 0.02
UBBP4-202ENST00000584755 SURF1Q15526 300 aa15.16■□□□□ 0.02
UBBP4-202ENST00000584755 KYAT1Q16773 422 aa15.16■□□□□ 0.02
UBBP4-202ENST00000584755 SV2AQ7L0J3 742 aa15.16■□□□□ 0.02
UBBP4-202ENST00000584755 ZBTB33Q86T24 672 aa15.16■□□□□ 0.02
UBBP4-202ENST00000584755 CCAR2Q8N163 923 aaKnown RBP15.16■□□□□ 0.02
UBBP4-202ENST00000584755 ZNF516Q92618 1163 aa15.16■□□□□ 0.02
UBBP4-202ENST00000584755 CHP1Q99653 195 aa15.16■□□□□ 0.02
UBBP4-202ENST00000584755 PDE11AQ9HCR9 933 aa15.16■□□□□ 0.02
UBBP4-202ENST00000584755 NLRC4Q9NPP4 1024 aa15.16■□□□□ 0.02
UBBP4-202ENST00000584755 ZNHIT6Q9NWK9 470 aaKnown RBP15.16■□□□□ 0.02
UBBP4-202ENST00000584755 AIPL1Q9NZN9 384 aa15.16■□□□□ 0.02
UBBP4-202ENST00000584755 APEX2Q9UBZ4 518 aa15.16■□□□□ 0.02
UBBP4-202ENST00000584755 PTPN22Q9Y2R2 807 aa15.16■□□□□ 0.02
UBBP4-202ENST00000584755 FHOD1Q9Y613 1164 aa15.16■□□□□ 0.02
UBBP4-202ENST00000584755 ERLIN2O94905 339 aa15.15■□□□□ 0.02
UBBP4-202ENST00000584755 DLATP10515 647 aaKnown RBP15.15■□□□□ 0.02
UBBP4-202ENST00000584755 HARSP12081 509 aaKnown RBP15.15■□□□□ 0.02
UBBP4-202ENST00000584755 AP3M2P53677 418 aa15.15■□□□□ 0.02
UBBP4-202ENST00000584755 MTF1Q14872 753 aa15.15■□□□□ 0.02
UBBP4-202ENST00000584755 ZACNQ401N2 412 aa15.15■□□□□ 0.02
UBBP4-202ENST00000584755 IQCEQ6IPM2 695 aa15.15■□□□□ 0.02
UBBP4-202ENST00000584755 FNBP1Q96RU3 617 aa15.15■□□□□ 0.02
UBBP4-202ENST00000584755 OSMRQ99650 979 aa15.15■□□□□ 0.02
UBBP4-202ENST00000584755 AJAP1Q9UKB5 411 aaPredicted RBP15.15■□□□□ 0.02
UBBP4-202ENST00000584755 CENPFP49454 3210 aa15.15■□□□□ 0.02
UBBP4-202ENST00000584755 PTPRJQ12913 1337 aa15.15■□□□□ 0.02
UBBP4-202ENST00000584755 CLTAP09496 248 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 AXLP30530 894 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 MRPS6P82932 125 aaKnown RBP15.14■□□□□ 0.01
UBBP4-202ENST00000584755 ENOX2Q16206 610 aaKnown RBP15.14■□□□□ 0.01
UBBP4-202ENST00000584755 TMEM132AQ24JP5 1023 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 DCAF4L1Q3SXM0 396 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 SEZ6Q53EL9 994 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 HGSNATQ68CP4 663 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 PHLDB3Q6NSJ2 640 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 TOGARAM2Q6ZUX3 1019 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 CDR2LQ86X02 465 aaPredicted RBP15.14■□□□□ 0.01
UBBP4-202ENST00000584755 WDR49Q8IV35 697 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 CCDC170Q8IYT3 715 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 SLC43A3Q8NBI5 491 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 FBXL13Q8NEE6 735 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 TMEM40Q8WWA1 233 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 CPB2Q96IY4 423 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 STK33Q9BYT3 514 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 CELF4Q9BZC1 486 aaKnown RBP15.14■□□□□ 0.01
UBBP4-202ENST00000584755 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.14■□□□□ 0.01
UBBP4-202ENST00000584755 CCP110O43303 1012 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 B4GALT4O60513 344 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 ZC3H11AO75152 810 aaKnown RBP eCLIP15.14■□□□□ 0.01
UBBP4-202ENST00000584755 ANK1P16157 1881 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 CLCN1P35523 988 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 C1QTNF8P60827 252 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 NCBP1Q09161 790 aaKnown RBP15.14■□□□□ 0.01
UBBP4-202ENST00000584755 MAPK8IP2Q13387 824 aaPredicted RBP15.14■□□□□ 0.01
UBBP4-202ENST00000584755 ITGA7Q13683 1181 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 FAM47CQ5HY64 1035 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 SFMBT2Q5VUG0 894 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 TDRD10Q5VZ19 366 aaKnown RBP15.14■□□□□ 0.01
UBBP4-202ENST00000584755 CATSPER4Q7RTX7 472 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 RSPH3Q86UC2 560 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 THNSL1Q8IYQ7 743 aa15.14■□□□□ 0.01
UBBP4-202ENST00000584755 DNAJC5GQ8N7S2 189 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms