RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 LONRF1Q17RB8 773 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 SETD3Q86TU7 594 aaPredicted RBP13.78□□□□□ -0.2
RNF43-208ENST00000584437 GIMAP8Q8ND71 665 aaPredicted RBP13.78□□□□□ -0.2
RNF43-208ENST00000584437 MRPL1Q9BYD6 325 aaKnown RBP13.78□□□□□ -0.2
RNF43-208ENST00000584437 SLAIN2Q9P270 581 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 SLC8A2Q9UPR5 921 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 AURKCQ9UQB9 309 aa13.78□□□□□ -0.2
RNF43-208ENST00000584437 M0QYV0 167 aa13.77□□□□□ -0.2
RNF43-208ENST00000584437 SUPT3HO75486 399 aa13.77□□□□□ -0.2
RNF43-208ENST00000584437 MAP3K7CLP57077 242 aa13.77□□□□□ -0.2
RNF43-208ENST00000584437 TRIP10Q15642 601 aa13.77□□□□□ -0.2
RNF43-208ENST00000584437 ACAP3Q96P50 834 aa13.77□□□□□ -0.2
RNF43-208ENST00000584437 HSPA13P48723 471 aa13.77□□□□□ -0.2
RNF43-208ENST00000584437 LRRC31Q6UY01 552 aa13.77□□□□□ -0.2
RNF43-208ENST00000584437 PATL1Q86TB9 770 aaKnown RBP13.77□□□□□ -0.2
RNF43-208ENST00000584437 ELOA2Q8IYF1 753 aaPredicted RBP13.77□□□□□ -0.2
RNF43-208ENST00000584437 SLC35G2Q8TBE7 412 aa13.77□□□□□ -0.2
RNF43-208ENST00000584437 LZTS1Q9Y250 596 aa13.77□□□□□ -0.2
RNF43-208ENST00000584437 ATP11BQ9Y2G3 1177 aa13.77□□□□□ -0.2
RNF43-208ENST00000584437 TMEM120BA0PK00 339 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 POTEFA5A3E0 1075 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 PP2D1A8MPX8 630 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 IGF2BP3O00425 579 aaKnown RBP eCLIP13.77□□□□□ -0.21
RNF43-208ENST00000584437 ZBTB22O15209 634 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 POTEIP0CG38 1075 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 QARSP47897 775 aaKnown RBP13.77□□□□□ -0.21
RNF43-208ENST00000584437 GALCP54803 685 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 EIF3EP60228 445 aaKnown RBP13.77□□□□□ -0.21
RNF43-208ENST00000584437 KPNB1Q14974 876 aaKnown RBP13.77□□□□□ -0.21
RNF43-208ENST00000584437 EFHC2Q5JST6 749 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 POTEGQ6S5H5 508 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 POTEEQ6S8J3 1075 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 SULF1Q8IWU6 871 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 C7orf25Q9BPX7 421 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 RAD51CO43502 376 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 IGKV5-2P06315 115 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 HLA-DPA1P20036 260 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 HADHAP40939 763 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 HSPA2P54652 639 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 CYB5D1Q6P9G0 228 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 JAMLQ86YT9 394 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 C2orf40Q9H1Z8 148 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 MAGEA13PA6NCF6 341 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 S100A5P33763 92 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 ADNPQ9H2P0 1102 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 DLGAP2Q9P1A6 1054 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 ADGRL3Q9HAR2 1447 aa13.77□□□□□ -0.21
RNF43-208ENST00000584437 APOL1O14791 398 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 HSPA1AP0DMV8 641 aaKnown RBP13.76□□□□□ -0.21
RNF43-208ENST00000584437 HSPA1BP0DMV9 641 aaKnown RBP13.76□□□□□ -0.21
RNF43-208ENST00000584437 CDH6P55285 790 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 MRPL28Q13084 256 aaKnown RBP13.76□□□□□ -0.21
RNF43-208ENST00000584437 KYNUQ16719 465 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 WDR93Q6P2C0 686 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 ZNF710Q8N1W2 664 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 USP38Q8NB14 1042 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 C10orf88Q9H8K7 445 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 ALG13Q9NP73 1137 aaKnown RBP13.76□□□□□ -0.21
RNF43-208ENST00000584437 DBR1Q9UK59 544 aaKnown RBP13.76□□□□□ -0.21
RNF43-208ENST00000584437 KIAA0391O15091 583 aaKnown RBP13.76□□□□□ -0.21
RNF43-208ENST00000584437 ORC4O43929 436 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 P3H1Q32P28 736 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 EPHA10Q5JZY3 1008 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 SLC27A3Q5K4L6 730 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 CDR2LQ86X02 465 aaPredicted RBP13.76□□□□□ -0.21
RNF43-208ENST00000584437 ANKMY2Q8IV38 441 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 DDIASQ8IXT1 998 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 GPD1LQ8N335 351 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 DCPSQ96C86 337 aaKnown RBP13.76□□□□□ -0.21
RNF43-208ENST00000584437 NSL1Q96IY1 281 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 ERP44Q9BS26 406 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 THTPAQ9BU02 230 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 COA1Q9GZY4 146 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 PALLDQ8WX93 1383 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 B2RBV5 119 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 TRIM49P0CI25 452 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 TRIM49CP0CI26 452 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 CARSP49589 748 aaKnown RBP13.76□□□□□ -0.21
RNF43-208ENST00000584437 SEC24CP53992 1094 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 NLRP11P59045 1033 aaKnown RBP13.76□□□□□ -0.21
RNF43-208ENST00000584437 DEFA1P59665 94 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 DEFA3P59666 94 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 PRAMEP78395 509 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 KCNA1Q09470 495 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 HIC2Q96JB3 615 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 RUBCNLQ9H714 662 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 HACD3Q9P035 362 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 NEU2Q9Y3R4 380 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 ANKARQ7Z5J8 1434 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 USP17L15C9J2P7 530 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 USP17L13C9JLJ4 530 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 USP17L11C9JVI0 530 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 USP17L18D6R9N7 530 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 USP17L22D6RA61 530 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 USP17L17D6RBQ6 530 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 USP17L19D6RCP7 530 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 USP17L20D6RJB6 530 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 SEC24DO94855 1032 aaPredicted RBP13.76□□□□□ -0.21
RNF43-208ENST00000584437 EYA4O95677 639 aa13.76□□□□□ -0.21
RNF43-208ENST00000584437 PHKA2P46019 1235 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms