RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 SLC7A3Q8WY07 619 aa12.42□□□□□ -0.42
CCDC47-206ENST00000584112 RSPH1Q8WYR4 309 aa12.42□□□□□ -0.42
CCDC47-206ENST00000584112 HAS1Q92839 578 aa12.42□□□□□ -0.42
CCDC47-206ENST00000584112 ZNF668Q96K58 619 aaPredicted RBP12.42□□□□□ -0.42
CCDC47-206ENST00000584112 CEP89Q96ST8 783 aa12.42□□□□□ -0.42
CCDC47-206ENST00000584112 SUCLA2Q9P2R7 463 aaPredicted RBP12.42□□□□□ -0.42
CCDC47-206ENST00000584112 KLK13Q9UKR3 277 aa12.42□□□□□ -0.42
CCDC47-206ENST00000584112 MYH15Q9Y2K3 1946 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 A0A087WZ62 844 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 A0A0U1RQF3 1178 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 GAS2O43903 313 aaKnown RBP12.41□□□□□ -0.42
CCDC47-206ENST00000584112 SEC24BO95487 1268 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 CAPNS1P04632 268 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 SKIP12755 728 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 GBP2P32456 591 aaPredicted RBP12.41□□□□□ -0.42
CCDC47-206ENST00000584112 PBX3P40426 434 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 RFC5P40937 340 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 POLGP54098 1239 aaPredicted RBP12.41□□□□□ -0.42
CCDC47-206ENST00000584112 SRSF1Q07955 248 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCDC47-206ENST00000584112 DRP2Q13474 957 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 PLA2G4FQ68DD2 849 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 NCAPH2Q6IBW4 605 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 OTUD6AQ7L8S5 288 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 GPR149Q86SP6 731 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 C4orf19Q8IY42 314 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 MRPL43Q8N983 215 aaKnown RBP12.41□□□□□ -0.42
CCDC47-206ENST00000584112 C12orf50Q8NA57 414 aaPredicted RBP12.41□□□□□ -0.42
CCDC47-206ENST00000584112 TNFRSF25Q93038 417 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 CEP170P1Q96L14 293 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 MYADMQ96S97 322 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 SH2D3AQ9BRG2 576 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 FDXACB1Q9BRP7 624 aaPredicted RBP12.41□□□□□ -0.42
CCDC47-206ENST00000584112 LXNQ9BS40 222 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 SMOC1Q9H4F8 434 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 ZSWIM4Q9H7M6 989 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 TYW1Q9NV66 732 aaKnown RBP12.41□□□□□ -0.42
CCDC47-206ENST00000584112 DZANK1Q9NVP4 752 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 LZTS1Q9Y250 596 aa12.41□□□□□ -0.42
CCDC47-206ENST00000584112 FAM205CA6NFA0 338 aa12.4□□□□□ -0.42
CCDC47-206ENST00000584112 HRO43593 1189 aa12.4□□□□□ -0.42
CCDC47-206ENST00000584112 DTNBO60941 627 aa12.4□□□□□ -0.42
CCDC47-206ENST00000584112 FGFR4P22455 802 aa12.4□□□□□ -0.42
CCDC47-206ENST00000584112 YWHABP31946 246 aaKnown RBP12.4□□□□□ -0.42
CCDC47-206ENST00000584112 PPM1AP35813 382 aa12.4□□□□□ -0.42
CCDC47-206ENST00000584112 SAFBQ15424 915 aaKnown RBP eCLIP12.4□□□□□ -0.42
CCDC47-206ENST00000584112 CALCRLQ16602 461 aa12.4□□□□□ -0.42
CCDC47-206ENST00000584112 EARS2Q5JPH6 523 aaKnown RBP12.4□□□□□ -0.42
CCDC47-206ENST00000584112 ZNF605Q86T29 641 aa12.4□□□□□ -0.42
CCDC47-206ENST00000584112 DIS3L2Q8IYB7 885 aaKnown RBP12.4□□□□□ -0.42
CCDC47-206ENST00000584112 RNF169Q8NCN4 708 aa12.4□□□□□ -0.42
CCDC47-206ENST00000584112 TCP11Q8WWU5 503 aa12.4□□□□□ -0.42
CCDC47-206ENST00000584112 PSPC1Q8WXF1 523 aaKnown RBP12.4□□□□□ -0.42
CCDC47-206ENST00000584112 NLRP4Q96MN2 994 aa12.4□□□□□ -0.42
CCDC47-206ENST00000584112 CASD1Q96PB1 797 aa12.4□□□□□ -0.42
CCDC47-206ENST00000584112 DDX23Q9BUQ8 820 aaKnown RBP12.4□□□□□ -0.42
CCDC47-206ENST00000584112 TRAIPQ9BWF2 469 aa12.4□□□□□ -0.42
CCDC47-206ENST00000584112 MRPL9Q9BYD2 267 aaKnown RBP12.4□□□□□ -0.42
CCDC47-206ENST00000584112 DHX33Q9H6R0 707 aaKnown RBP12.4□□□□□ -0.42
CCDC47-206ENST00000584112 CWH43Q9H720 699 aa12.4□□□□□ -0.42
CCDC47-206ENST00000584112 PUF60Q9UHX1 559 aaKnown RBP12.4□□□□□ -0.42
CCDC47-206ENST00000584112 PCDHA12Q9UN75 941 aa12.4□□□□□ -0.42
CCDC47-206ENST00000584112 LIMCH1Q9UPQ0 1083 aa12.4□□□□□ -0.42
CCDC47-206ENST00000584112 COL4A3BPQ9Y5P4 624 aa12.4□□□□□ -0.42
CCDC47-206ENST00000584112 TRIP11Q15643 1979 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 CARNS1A5YM72 827 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 SPDYE4A6NLX3 237 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 BTBD18B2RXH4 712 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 ASAP2O43150 1006 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 NEMFO60524 1076 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 FOXD2O60548 495 aaPredicted RBP12.39□□□□□ -0.43
CCDC47-206ENST00000584112 JAK2O60674 1132 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 ABCB7O75027 752 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 CSDE1O75534 798 aaKnown RBP12.39□□□□□ -0.43
CCDC47-206ENST00000584112 RAB27AP51159 221 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 NPEPPSP55786 919 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 PLCB3Q01970 1234 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 SPIRE1Q08AE8 756 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 MTAPQ13126 283 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 SMC1AQ14683 1233 aaKnown RBP12.39□□□□□ -0.43
CCDC47-206ENST00000584112 XKR9Q5GH70 373 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 TWF2Q6IBS0 349 aaKnown RBP12.39□□□□□ -0.43
CCDC47-206ENST00000584112 CATSPER4Q7RTX7 472 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 AUTS2Q8WXX7 1259 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 DYDC2Q96IM9 177 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 SHDQ96IW2 340 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 ZNF558Q96NG5 402 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 FAM126AQ9BYI3 521 aaPredicted RBP12.39□□□□□ -0.43
CCDC47-206ENST00000584112 LTB4R2Q9NPC1 389 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 SLC2A4RGQ9NR83 387 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 RNF19AQ9NV58 838 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 RGL1Q9NZL6 768 aa12.39□□□□□ -0.43
CCDC47-206ENST00000584112 PIN4Q9Y237 131 aaKnown RBP12.39□□□□□ -0.43
CCDC47-206ENST00000584112 MTCL1Q9Y4B5 1905 aaKnown RBP12.39□□□□□ -0.43
CCDC47-206ENST00000584112 SPAG17Q6Q759 2223 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 CACNA1EQ15878 2313 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 PYCARD-AS1I3L0S3 204 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 PHKA2P46019 1235 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 FOSBP53539 338 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 GPC5P78333 572 aa12.38□□□□□ -0.43
CCDC47-206ENST00000584112 CYP4A11Q02928 519 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms