RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 RTN4RL1Q86UN2 441 aaPredicted RBP12.7□□□□□ -0.38
CDRT1-207ENST00000583965 ECHDC2Q86YB7 292 aa12.7□□□□□ -0.38
CDRT1-207ENST00000583965 FAM114A1Q8IWE2 563 aa12.7□□□□□ -0.38
CDRT1-207ENST00000583965 THNSL1Q8IYQ7 743 aa12.7□□□□□ -0.38
CDRT1-207ENST00000583965 FAM200AQ8TCP9 573 aa12.7□□□□□ -0.38
CDRT1-207ENST00000583965 RSPH1Q8WYR4 309 aa12.7□□□□□ -0.38
CDRT1-207ENST00000583965 MED15Q96RN5 788 aa12.7□□□□□ -0.38
CDRT1-207ENST00000583965 SRRTQ9BXP5 876 aaKnown RBP12.7□□□□□ -0.38
CDRT1-207ENST00000583965 THAP9Q9H5L6 903 aa12.7□□□□□ -0.38
CDRT1-207ENST00000583965 UBN1Q9NPG3 1134 aa12.7□□□□□ -0.38
CDRT1-207ENST00000583965 CPSF3Q9UKF6 684 aaKnown RBP12.7□□□□□ -0.38
CDRT1-207ENST00000583965 IPPQ9Y573 584 aa12.7□□□□□ -0.38
CDRT1-207ENST00000583965 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.69□□□□□ -0.38
CDRT1-207ENST00000583965 BECN2A8MW95 431 aa12.69□□□□□ -0.38
CDRT1-207ENST00000583965 STAG3L1P0CL83 205 aa12.69□□□□□ -0.38
CDRT1-207ENST00000583965 ACRP10323 421 aa12.69□□□□□ -0.38
CDRT1-207ENST00000583965 EPB41P11171 864 aaKnown RBP12.69□□□□□ -0.38
CDRT1-207ENST00000583965 DEKP35659 375 aaKnown RBP12.69□□□□□ -0.38
CDRT1-207ENST00000583965 PSMC2P35998 433 aaKnown RBP12.69□□□□□ -0.38
CDRT1-207ENST00000583965 YARSP54577 528 aaKnown RBP12.69□□□□□ -0.38
CDRT1-207ENST00000583965 ENPEPQ07075 957 aa12.69□□□□□ -0.38
CDRT1-207ENST00000583965 IQCB1Q15051 598 aa12.69□□□□□ -0.38
CDRT1-207ENST00000583965 SNRNP35Q16560 246 aaKnown RBP12.69□□□□□ -0.38
CDRT1-207ENST00000583965 TCTN1Q2MV58 587 aa12.69□□□□□ -0.38
CDRT1-207ENST00000583965 TMEM240Q5SV17 173 aa12.69□□□□□ -0.38
CDRT1-207ENST00000583965 CEP135Q66GS9 1140 aa12.69□□□□□ -0.38
CDRT1-207ENST00000583965 ZNF598Q86UK7 904 aaKnown RBP12.69□□□□□ -0.38
CDRT1-207ENST00000583965 CD302Q8IX05 232 aa12.69□□□□□ -0.38
CDRT1-207ENST00000583965 AOPEPQ8N6M6 819 aa12.69□□□□□ -0.38
CDRT1-207ENST00000583965 SMG8Q8ND04 991 aaKnown RBP12.69□□□□□ -0.38
CDRT1-207ENST00000583965 SAAL1Q96ER3 474 aa12.69□□□□□ -0.38
CDRT1-207ENST00000583965 ACAP3Q96P50 834 aa12.69□□□□□ -0.38
CDRT1-207ENST00000583965 FAM213AQ9BRX8 229 aa12.69□□□□□ -0.38
CDRT1-207ENST00000583965 RBSNQ9H1K0 784 aa12.69□□□□□ -0.38
CDRT1-207ENST00000583965 MTIF3Q9H2K0 278 aaKnown RBP12.69□□□□□ -0.38
CDRT1-207ENST00000583965 NXF3Q9H4D5 531 aaKnown RBP12.69□□□□□ -0.38
CDRT1-207ENST00000583965 RPF1Q9H9Y2 349 aaKnown RBP12.69□□□□□ -0.38
CDRT1-207ENST00000583965 PLEKHA5Q9HAU0 1116 aa12.69□□□□□ -0.38
CDRT1-207ENST00000583965 CBX8Q9HC52 389 aa12.69□□□□□ -0.38
CDRT1-207ENST00000583965 METTL14Q9HCE5 456 aaKnown RBP12.69□□□□□ -0.38
CDRT1-207ENST00000583965 TOPORSQ9NS56 1045 aaPredicted RBP12.69□□□□□ -0.38
CDRT1-207ENST00000583965 TMEM161AQ9NX61 479 aa12.69□□□□□ -0.38
CDRT1-207ENST00000583965 GIT1Q9Y2X7 761 aa12.69□□□□□ -0.38
CDRT1-207ENST00000583965 NFE2L3Q9Y4A8 694 aa12.69□□□□□ -0.38
CDRT1-207ENST00000583965 LAMA2P24043 3122 aaKnown RBP12.69□□□□□ -0.38
CDRT1-207ENST00000583965 NLRC5Q86WI3 1866 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 GOLGA8IPA6NC78 632 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 GOLGA8JA6NMD2 632 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 HOXA2O43364 376 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 AKAP3O75969 853 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 IL18RAPO95256 599 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 ITGA4P13612 1032 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 ATF7P17544 494 aaPredicted RBP12.68□□□□□ -0.38
CDRT1-207ENST00000583965 ACOT2P49753 483 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 MARSP56192 900 aaKnown RBP12.68□□□□□ -0.38
CDRT1-207ENST00000583965 TPM4P67936 248 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 NCAPHQ15003 741 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 SURF1Q15526 300 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 UVSSAQ2YD98 709 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 CRELD2Q6UXH1 353 aaPredicted RBP12.68□□□□□ -0.38
CDRT1-207ENST00000583965 ZNF365Q70YC5 407 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 INTS8Q75QN2 995 aaKnown RBP12.68□□□□□ -0.38
CDRT1-207ENST00000583965 C16orf59Q7L2K0 433 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 USP37Q86T82 979 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 NPAS4Q8IUM7 802 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 BRSK2Q8IWQ3 736 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 DHX40Q8IX18 779 aaKnown RBP12.68□□□□□ -0.38
CDRT1-207ENST00000583965 FAM186BQ8IYM0 893 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 CEP120Q8N960 986 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 TSPAN18Q96SJ8 248 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 SNTG2Q9NY99 539 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 PCDHB7Q9Y5E2 793 aa12.68□□□□□ -0.38
CDRT1-207ENST00000583965 KIAA1671Q9BY89 1806 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 RECQL4O94761 1208 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 AMHP03971 560 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 ADRB2P07550 413 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 KRT13P13646 458 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 TNFSF9P41273 254 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 MAGEA10P43363 369 aaPredicted RBP12.67□□□□□ -0.38
CDRT1-207ENST00000583965 KCNJ6P48051 423 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 CASP4P49662 377 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 MCCD1P59942 119 aaPredicted RBP12.67□□□□□ -0.38
CDRT1-207ENST00000583965 OSTNP61366 133 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 WDR5P61964 334 aaKnown RBP12.67□□□□□ -0.38
CDRT1-207ENST00000583965 SPAG1Q07617 926 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 CYP24A1Q07973 514 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 ENOX2Q16206 610 aaKnown RBP12.67□□□□□ -0.38
CDRT1-207ENST00000583965 CCDC40Q4G0X9 1142 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 ZBTB41Q5SVQ8 909 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 CDKAL1Q5VV42 579 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 FRMD5Q7Z6J6 570 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 CBWD2Q8IUF1 395 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 RDH13Q8NBN7 331 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 ZSWIM2Q8NEG5 633 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 TMC2Q8TDI7 906 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 HERVK_113Q902F9 699 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 MFSD14AQ96MC6 490 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.67□□□□□ -0.38
CDRT1-207ENST00000583965 ASB7Q9H672 318 aa12.67□□□□□ -0.38
CDRT1-207ENST00000583965 RBAKQ9NYW8 714 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms