RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 RETP07949 1114 aa12.79□□□□□ -0.36
NUP85-224ENST00000583948 PRKCEQ02156 737 aa12.79□□□□□ -0.36
NUP85-224ENST00000583948 SIM2Q14190 667 aaPredicted RBP12.79□□□□□ -0.36
NUP85-224ENST00000583948 MTERF2Q49AM1 385 aa12.79□□□□□ -0.36
NUP85-224ENST00000583948 CATSPER4Q7RTX7 472 aa12.79□□□□□ -0.36
NUP85-224ENST00000583948 RHPN2Q8IUC4 686 aa12.79□□□□□ -0.36
NUP85-224ENST00000583948 COLGALT2Q8IYK4 626 aa12.79□□□□□ -0.36
NUP85-224ENST00000583948 TRIM22Q8IYM9 498 aa12.79□□□□□ -0.36
NUP85-224ENST00000583948 RNF168Q8IYW5 571 aaPredicted RBP12.79□□□□□ -0.36
NUP85-224ENST00000583948 MCRS1Q96EZ8 462 aa12.79□□□□□ -0.36
NUP85-224ENST00000583948 ZFP42Q96MM3 310 aa12.79□□□□□ -0.36
NUP85-224ENST00000583948 NLRP4Q96MN2 994 aa12.79□□□□□ -0.36
NUP85-224ENST00000583948 FAM193BQ96PV7 902 aaPredicted RBP12.79□□□□□ -0.36
NUP85-224ENST00000583948 ZNF577Q9BSK1 485 aa12.79□□□□□ -0.36
NUP85-224ENST00000583948 GCOM2Q9BZD3 368 aaPredicted RBP12.79□□□□□ -0.36
NUP85-224ENST00000583948 MINDY3Q9H8M7 445 aa12.79□□□□□ -0.36
NUP85-224ENST00000583948 RSAD1Q9HA92 442 aa12.79□□□□□ -0.36
NUP85-224ENST00000583948 RBM12Q9NTZ6 932 aaKnown RBP12.79□□□□□ -0.36
NUP85-224ENST00000583948 ZMYND10O75800 440 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 BAG4O95429 457 aaKnown RBP12.78□□□□□ -0.36
NUP85-224ENST00000583948 PDIA4P13667 645 aaKnown RBP12.78□□□□□ -0.36
NUP85-224ENST00000583948 FDPSP14324 419 aaKnown RBP12.78□□□□□ -0.36
NUP85-224ENST00000583948 IFNAR1P17181 557 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 IGFBP6P24592 240 aaPredicted RBP12.78□□□□□ -0.36
NUP85-224ENST00000583948 TMOD1P28289 359 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 MCM4P33991 863 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 SREBF1P36956 1147 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 SCNN1GP51170 649 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 NAPAP54920 295 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 AKAP17AQ02040 695 aaKnown RBP12.78□□□□□ -0.36
NUP85-224ENST00000583948 GUCY1B3Q02153 619 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 DSG1Q02413 1049 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 RING1Q06587 406 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 CSRP2Q16527 193 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 IL31Q6EBC2 164 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 TANGO2Q6ICL3 276 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 UNQ6494/PRO21346Q6UXR6 183 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 SMG8Q8ND04 991 aaKnown RBP12.78□□□□□ -0.36
NUP85-224ENST00000583948 URGCPQ8TCY9 931 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 HASPINQ8TF76 798 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 C8orf76Q96K31 380 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 CEP89Q96ST8 783 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 PAAF1Q9BRP4 392 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 PHF20Q9BVI0 1012 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 APOL6Q9BWW8 343 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 EIF2AQ9BY44 585 aaKnown RBP12.78□□□□□ -0.36
NUP85-224ENST00000583948 RIC8AQ9NPQ8 531 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 BMP2KQ9NSY1 1161 aaPredicted RBP12.78□□□□□ -0.36
NUP85-224ENST00000583948 STK36Q9NRP7 1315 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 TDRD15B5MCY1 1934 aaKnown RBP12.78□□□□□ -0.36
NUP85-224ENST00000583948 TICRRQ7Z2Z1 1910 aa12.78□□□□□ -0.36
NUP85-224ENST00000583948 F5P12259 2224 aa12.77□□□□□ -0.36
NUP85-224ENST00000583948 LAMA5O15230 3695 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 DDX11L8A8MPP1 907 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 GOLGA6L22H0YM25 854 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 PSAPP07602 524 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 MLH1P40692 756 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 SHC2P98077 582 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 ADCY1Q08828 1119 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 NTRK3Q16288 839 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 AASDHQ4L235 1098 aaPredicted RBP12.77□□□□□ -0.37
NUP85-224ENST00000583948 WDR44Q5JSH3 913 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 RTP2Q5QGT7 225 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 MCTP1Q6DN14 999 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 PSAPL1Q6NUJ1 521 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 TMTC3Q6ZXV5 915 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.77□□□□□ -0.37
NUP85-224ENST00000583948 FERMT3Q86UX7 667 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 NPAS3Q8IXF0 933 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 FAM160A2Q8N612 972 aaPredicted RBP12.77□□□□□ -0.37
NUP85-224ENST00000583948 ZNF579Q8NAF0 562 aaKnown RBP12.77□□□□□ -0.37
NUP85-224ENST00000583948 GAD1Q99259 594 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 OSBPL6Q9BZF3 934 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 ARRDC1-AS1Q9H2J1 176 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 LMAN1LQ9HAT1 526 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 CHST12Q9NRB3 414 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 CHST7Q9NS84 486 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 ZDHHC7Q9NXF8 308 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 DNMT3BQ9UBC3 853 aaKnown RBP12.77□□□□□ -0.37
NUP85-224ENST00000583948 PCDHA10Q9Y5I2 948 aa12.77□□□□□ -0.37
NUP85-224ENST00000583948 SMG1Q96Q15 3661 aaKnown RBP12.77□□□□□ -0.37
NUP85-224ENST00000583948 SMCO2A6NFE2 343 aa12.76□□□□□ -0.37
NUP85-224ENST00000583948 SRRM3A6NNA2 597 aaPredicted RBP12.76□□□□□ -0.37
NUP85-224ENST00000583948 EDIL3O43854 480 aa12.76□□□□□ -0.37
NUP85-224ENST00000583948 ZNF623O75123 536 aa12.76□□□□□ -0.37
NUP85-224ENST00000583948 STBD1O95210 358 aa12.76□□□□□ -0.37
NUP85-224ENST00000583948 KCNK5O95279 499 aa12.76□□□□□ -0.37
NUP85-224ENST00000583948 HOXA11P31270 313 aaPredicted RBP12.76□□□□□ -0.37
NUP85-224ENST00000583948 RPS9P46781 194 aaKnown RBP12.76□□□□□ -0.37
NUP85-224ENST00000583948 PXNP49023 591 aaPredicted RBP12.76□□□□□ -0.37
NUP85-224ENST00000583948 CLK2P49760 499 aaKnown RBP12.76□□□□□ -0.37
NUP85-224ENST00000583948 ADCY7P51828 1080 aa12.76□□□□□ -0.37
NUP85-224ENST00000583948 FOXC1Q12948 553 aa12.76□□□□□ -0.37
NUP85-224ENST00000583948 TRIM29Q14134 588 aa12.76□□□□□ -0.37
NUP85-224ENST00000583948 TARBP2Q15633 366 aaKnown RBP12.76□□□□□ -0.37
NUP85-224ENST00000583948 SLC5A9Q2M3M2 681 aa12.76□□□□□ -0.37
NUP85-224ENST00000583948 PRR16Q569H4 304 aa12.76□□□□□ -0.37
NUP85-224ENST00000583948 TCEAL6Q6IPX3 200 aa12.76□□□□□ -0.37
NUP85-224ENST00000583948 CYP26C1Q6V0L0 522 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 348.6 ms