RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 USP41Q3LFD5 358 aa9.74□□□□□ -0.85
NUP85-223ENST00000583877 ZNF528Q3MIS6 628 aa9.74□□□□□ -0.85
NUP85-223ENST00000583877 BMP2KLQ5H9B9 411 aa9.74□□□□□ -0.85
NUP85-223ENST00000583877 NOTUMQ6P988 496 aa9.74□□□□□ -0.85
NUP85-223ENST00000583877 LILRA6Q6PI73 481 aa9.74□□□□□ -0.85
NUP85-223ENST00000583877 POTEGQ6S5H5 508 aa9.74□□□□□ -0.85
NUP85-223ENST00000583877 FERMT3Q86UX7 667 aa9.74□□□□□ -0.85
NUP85-223ENST00000583877 MAML2Q8IZL2 1156 aaPredicted RBP9.74□□□□□ -0.85
NUP85-223ENST00000583877 DCLK2Q8N568 766 aa9.74□□□□□ -0.85
NUP85-223ENST00000583877 TCP11Q8WWU5 503 aa9.74□□□□□ -0.85
NUP85-223ENST00000583877 KCNB2Q92953 911 aa9.74□□□□□ -0.85
NUP85-223ENST00000583877 TMEM143Q96AN5 459 aa9.74□□□□□ -0.85
NUP85-223ENST00000583877 CEP170P1Q96L14 293 aa9.74□□□□□ -0.85
NUP85-223ENST00000583877 GAD1Q99259 594 aa9.74□□□□□ -0.85
NUP85-223ENST00000583877 COLEC11Q9BWP8 271 aa9.74□□□□□ -0.85
NUP85-223ENST00000583877 AGXT2Q9BYV1 514 aa9.74□□□□□ -0.85
NUP85-223ENST00000583877 FOXQ1Q9C009 403 aa9.74□□□□□ -0.85
NUP85-223ENST00000583877 MIOSQ9NXC5 875 aa9.74□□□□□ -0.85
NUP85-223ENST00000583877 PCDHA4Q9UN74 947 aa9.74□□□□□ -0.85
NUP85-223ENST00000583877 PCDHGA4Q9Y5G9 962 aa9.74□□□□□ -0.85
NUP85-223ENST00000583877 NUMBLQ9Y6R0 609 aa9.74□□□□□ -0.85
NUP85-223ENST00000583877 KANSL1LA0AUZ9 987 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 POTEMA6NI47 508 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 F8W810 466 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 M0R2N6 131 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 EML1O00423 815 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 P4HBP07237 508 aaKnown RBP9.73□□□□□ -0.85
NUP85-223ENST00000583877 SDHBP21912 280 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 FSHRP23945 695 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 MLH1P40692 756 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 SCNN1GP51170 649 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 NCBP1Q09161 790 aaKnown RBP9.73□□□□□ -0.85
NUP85-223ENST00000583877 RSPO4Q2I0M5 234 aaPredicted RBP9.73□□□□□ -0.85
NUP85-223ENST00000583877 FUT10Q6P4F1 479 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 BLOC1S2Q6QNY1 142 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 HACE1Q8IYU2 909 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 BLIDQ8IZY5 108 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 FAM177A1Q8N128 213 aaPredicted RBP9.73□□□□□ -0.85
NUP85-223ENST00000583877 GPR161Q8N6U8 529 aaKnown RBP9.73□□□□□ -0.85
NUP85-223ENST00000583877 RNF149Q8NC42 400 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 B3GALT6Q96L58 329 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 FAM20AQ96MK3 541 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 ZFP42Q96MM3 310 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 JAKMIP1Q96N16 626 aaKnown RBP9.73□□□□□ -0.85
NUP85-223ENST00000583877 DDX23Q9BUQ8 820 aaKnown RBP9.73□□□□□ -0.85
NUP85-223ENST00000583877 EIF2AQ9BY44 585 aaKnown RBP9.73□□□□□ -0.85
NUP85-223ENST00000583877 BCO2Q9BYV7 579 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 GPR62Q9BZJ7 368 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 NPDC1Q9NQX5 325 aaPredicted RBP9.73□□□□□ -0.85
NUP85-223ENST00000583877 DDX25Q9UHL0 483 aaKnown RBP9.73□□□□□ -0.85
NUP85-223ENST00000583877 ADAM28Q9UKQ2 775 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 FBXO4Q9UKT5 387 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 VAV3Q9UKW4 847 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 GIT1Q9Y2X7 761 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 GREB1Q4ZG55 1949 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 ZFHX4Q86UP3 3567 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 MYH11P35749 1972 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 ZMYM2Q9UBW7 1377 aa9.73□□□□□ -0.85
NUP85-223ENST00000583877 KIF26AQ9ULI4 1882 aaPredicted RBP9.72□□□□□ -0.85
NUP85-223ENST00000583877 SPTLC1O15269 473 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 MAP3K7O43318 606 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 SLC37A4O43826 429 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 TSPAN1O60635 241 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 LRRN2O75325 713 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 MAGEA9P43362 315 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 EVCP57679 992 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 PTENP60484 403 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 GPC5P78333 572 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 PRKCQQ04759 706 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 POU5F1BQ06416 359 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 MXD4Q14582 209 aaPredicted RBP9.72□□□□□ -0.85
NUP85-223ENST00000583877 EMC2Q15006 297 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 GALNT17Q6IS24 598 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 MTSS1LQ765P7 747 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 OTUD6AQ7L8S5 288 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 GLYCTKQ8IVS8 523 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 PARP9Q8IXQ6 854 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 C4orf19Q8IY42 314 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 TRIM22Q8IYM9 498 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 DAGLBQ8NCG7 672 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 FGF14Q92915 247 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 CPB2Q96IY4 423 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 MTRQ99707 1265 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 RPP25Q9BUL9 199 aaKnown RBP9.72□□□□□ -0.85
NUP85-223ENST00000583877 OSBPL6Q9BZF3 934 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 TRIM6Q9C030 488 aaPredicted RBP9.72□□□□□ -0.85
NUP85-223ENST00000583877 CSRNP2Q9H175 543 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 SLKQ9H2G2 1235 aaPredicted RBP9.72□□□□□ -0.85
NUP85-223ENST00000583877 WRAP73Q9P2S5 460 aaPredicted RBP9.72□□□□□ -0.85
NUP85-223ENST00000583877 CDH7Q9ULB5 785 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 HES2Q9Y543 173 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 PCDHGA2Q9Y5H1 932 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 PCDHGA10Q9Y5H3 936 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 COL4A2P08572 1712 aa9.72□□□□□ -0.85
NUP85-223ENST00000583877 ZNF638Q14966 1978 aaKnown RBP9.72□□□□□ -0.85
NUP85-223ENST00000583877 LAMTOR5O43504 91 aa9.71□□□□□ -0.86
NUP85-223ENST00000583877 HNRNPA1P09651 372 aaKnown RBP eCLIP9.71□□□□□ -0.86
NUP85-223ENST00000583877 RPL17P18621 184 aaKnown RBP9.71□□□□□ -0.86
NUP85-223ENST00000583877 RPS6KB1P23443 525 aa9.71□□□□□ -0.86
NUP85-223ENST00000583877 PDIA3P30101 505 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms