RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 ALKAL1Q6UXT8 129 aa10.15□□□□□ -0.78
UBBP4-201ENST00000583708 FILIP1Q7Z7B0 1213 aa10.15□□□□□ -0.78
UBBP4-201ENST00000583708 ZC3H3Q8IXZ2 948 aaKnown RBP10.15□□□□□ -0.78
UBBP4-201ENST00000583708 GPD1LQ8N335 351 aa10.15□□□□□ -0.78
UBBP4-201ENST00000583708 SMG8Q8ND04 991 aaKnown RBP10.15□□□□□ -0.78
UBBP4-201ENST00000583708 LINC01599Q8WXQ3 324 aa10.15□□□□□ -0.78
UBBP4-201ENST00000583708 HPS3Q969F9 1004 aa10.15□□□□□ -0.78
UBBP4-201ENST00000583708 ZNF689Q96CS4 500 aaPredicted RBP10.15□□□□□ -0.78
UBBP4-201ENST00000583708 RPF1Q9H9Y2 349 aaKnown RBP10.15□□□□□ -0.78
UBBP4-201ENST00000583708 RSAD1Q9HA92 442 aa10.15□□□□□ -0.78
UBBP4-201ENST00000583708 METTL14Q9HCE5 456 aaKnown RBP10.15□□□□□ -0.78
UBBP4-201ENST00000583708 AAASQ9NRG9 546 aa10.15□□□□□ -0.78
UBBP4-201ENST00000583708 TMEM63CQ9P1W3 806 aa10.15□□□□□ -0.78
UBBP4-201ENST00000583708 CPSF3Q9UKF6 684 aaKnown RBP10.15□□□□□ -0.78
UBBP4-201ENST00000583708 FRMD4BQ9Y2L6 1034 aa10.15□□□□□ -0.78
UBBP4-201ENST00000583708 LTBP2Q14767 1821 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 TMEM265A0A087WTH1 108 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 IKBKBO14920 756 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 FAM189A1O60320 539 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 STX10O60499 249 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 OFD1O75665 1012 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 NR3C1P04150 777 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 CYP3A5P20815 502 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 PSMC2P35998 433 aaKnown RBP10.14□□□□□ -0.79
UBBP4-201ENST00000583708 KCNA1Q09470 495 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 ADAM9Q13443 819 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 NOMO2Q5JPE7 1267 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 SMYD5Q6GMV2 418 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 SLC39A4Q6P5W5 647 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.14□□□□□ -0.79
UBBP4-201ENST00000583708 AGMOQ6ZNB7 445 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 INTS8Q75QN2 995 aaKnown RBP10.14□□□□□ -0.79
UBBP4-201ENST00000583708 NELFCDQ8IXH7 590 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 TET1Q8NFU7 2136 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 SP7Q8TDD2 431 aaPredicted RBP10.14□□□□□ -0.79
UBBP4-201ENST00000583708 TMC2Q8TDI7 906 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 CACTINQ8WUQ7 758 aaKnown RBP10.14□□□□□ -0.79
UBBP4-201ENST00000583708 DDX27Q96GQ7 796 aaKnown RBP10.14□□□□□ -0.79
UBBP4-201ENST00000583708 ZBTB45Q96K62 511 aaPredicted RBP10.14□□□□□ -0.79
UBBP4-201ENST00000583708 UROC1Q96N76 676 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 RPS6KC1Q96S38 1066 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 BPIFA3Q9BQP9 254 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 EIF2AQ9BY44 585 aaKnown RBP10.14□□□□□ -0.79
UBBP4-201ENST00000583708 FGFBP2Q9BYJ0 223 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 HSPBP1Q9NZL4 362 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 ANKFY1Q9P2R3 1169 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 MSRAQ9UJ68 235 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 GDAQ9Y2T3 454 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 C2CD2Q9Y426 696 aa10.14□□□□□ -0.79
UBBP4-201ENST00000583708 TTC26A0AVF1 554 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 ARL5CA6NH57 179 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 TTLL13PA6NNM8 815 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 BIN1O00499 593 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 SLC16A3O15427 465 aaKnown RBP10.13□□□□□ -0.79
UBBP4-201ENST00000583708 TLL1O43897 1013 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 EXOC3O60645 756 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 EDN1P05305 212 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 RB1P06400 928 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 THP07101 528 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 ATF7P17544 494 aaPredicted RBP10.13□□□□□ -0.79
UBBP4-201ENST00000583708 BMP6P22004 513 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 NR2F2P24468 414 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 RPL9P32969 192 aaKnown RBP10.13□□□□□ -0.79
UBBP4-201ENST00000583708 PPP2R3AQ06190 1150 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 GRIK3Q13003 919 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 TCTN1Q2MV58 587 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 C9orf50Q5SZB4 431 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 GPR153Q6NV75 609 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 FRMD5Q7Z6J6 570 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 ZBTB33Q86T24 672 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 FAM114A1Q8IWE2 563 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 BRSK2Q8IWQ3 736 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 THNSL1Q8IYQ7 743 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 LRRC43Q8N309 656 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 GLIS3Q8NEA6 775 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 ENOX1Q8TC92 643 aaKnown RBP10.13□□□□□ -0.79
UBBP4-201ENST00000583708 NELFBQ8WX92 580 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 MFSD14AQ96MC6 490 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 YME1L1Q96TA2 773 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 TMEM175Q9BSA9 504 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 PLVAPQ9BX97 442 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 SEMA6BQ9H3T3 888 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 SNTG2Q9NY99 539 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 CXXC1Q9P0U4 656 aaPredicted RBP10.13□□□□□ -0.79
UBBP4-201ENST00000583708 CNTN3Q9P232 1028 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 PARP2Q9UGN5 583 aa10.13□□□□□ -0.79
UBBP4-201ENST00000583708 TNRC18O15417 2968 aaPredicted RBP10.13□□□□□ -0.79
UBBP4-201ENST00000583708 SMTNL1A8MU46 457 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 RECQL4O94761 1208 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 ALDH2P05091 517 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 EPB41P11171 864 aaKnown RBP10.12□□□□□ -0.79
UBBP4-201ENST00000583708 KRT13P13646 458 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 GTF2H1P32780 548 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 PPM1AP35813 382 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 MARSP56192 900 aaKnown RBP10.12□□□□□ -0.79
UBBP4-201ENST00000583708 CLDN10P78369 228 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 DEFB103AP81534 67 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 TYRO3Q06418 890 aa10.12□□□□□ -0.79
UBBP4-201ENST00000583708 BTG3Q14201 252 aaPredicted RBP10.12□□□□□ -0.79
UBBP4-201ENST00000583708 PSMD6Q15008 389 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms