RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 RBP3P10745 1247 aa5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 MYCLP1P12525 358 aaPredicted RBP5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 BPIP17213 487 aa5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 FBLP22087 321 aaKnown RBP5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 DDX6P26196 483 aaKnown RBP eCLIP5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 MGAT1P26572 445 aa5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 BMPR1AP36894 532 aa5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 IL12RB1P42701 662 aa5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 ID4P47928 161 aa5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 GUCY1B3Q02153 619 aa5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 TAP1Q03518 808 aa5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 METRNLQ641Q3 311 aa5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 HDGFL2Q7Z4V5 671 aaPredicted RBP5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 ADGRG3Q86Y34 549 aa5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 CLRN3Q8NCR9 226 aa5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 FBXO18Q8NFZ0 1043 aa5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 ASB10Q8WXI3 467 aa5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 ZNF764Q96H86 408 aaPredicted RBP5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 PHACTR3Q96KR7 559 aa5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 PRDM13Q9H4Q3 707 aa5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 DPP7Q9UHL4 492 aa5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 EPN1Q9Y6I3 576 aaPredicted RBP5.78□□□□□ -1.48
SMCHD1-208ENST00000583344 MARCH11A6NNE9 402 aa5.77□□□□□ -1.49
SMCHD1-208ENST00000583344 SPDEFO95238 335 aa5.77□□□□□ -1.49
SMCHD1-208ENST00000583344 GASTP01350 101 aa5.77□□□□□ -1.49
SMCHD1-208ENST00000583344 SPATA31D3P0C874 917 aa5.77□□□□□ -1.49
SMCHD1-208ENST00000583344 TYRP1P17643 537 aa5.77□□□□□ -1.49
SMCHD1-208ENST00000583344 CHN2P52757 468 aa5.77□□□□□ -1.49
SMCHD1-208ENST00000583344 CCT2P78371 535 aaKnown RBP5.77□□□□□ -1.49
SMCHD1-208ENST00000583344 CDK17Q00537 523 aa5.77□□□□□ -1.49
SMCHD1-208ENST00000583344 FOXI1Q12951 378 aa5.77□□□□□ -1.49
SMCHD1-208ENST00000583344 UGT8Q16880 541 aa5.77□□□□□ -1.49
SMCHD1-208ENST00000583344 CCDC142Q17RM4 750 aa5.77□□□□□ -1.49
SMCHD1-208ENST00000583344 SPATA31D4Q6ZUB0 917 aa5.77□□□□□ -1.49
SMCHD1-208ENST00000583344 LINC00476Q8WZB0 136 aa5.77□□□□□ -1.49
SMCHD1-208ENST00000583344 USP7Q93009 1102 aa5.77□□□□□ -1.49
SMCHD1-208ENST00000583344 CAVIN3Q969G5 261 aa5.77□□□□□ -1.49
SMCHD1-208ENST00000583344 MYO15BQ96JP2 1530 aa5.76□□□□□ -1.49
SMCHD1-208ENST00000583344 WNT10BO00744 389 aa5.76□□□□□ -1.49
SMCHD1-208ENST00000583344 NEMP1O14524 444 aa5.76□□□□□ -1.49
SMCHD1-208ENST00000583344 ADSLP30566 484 aaPredicted RBP5.76□□□□□ -1.49
SMCHD1-208ENST00000583344 CRHR1P34998 444 aa5.76□□□□□ -1.49
SMCHD1-208ENST00000583344 PLA2G5P39877 138 aa5.76□□□□□ -1.49
SMCHD1-208ENST00000583344 FLT3LGP49771 235 aa5.76□□□□□ -1.49
SMCHD1-208ENST00000583344 MRPS21P82921 87 aaKnown RBP5.76□□□□□ -1.49
SMCHD1-208ENST00000583344 RESTQ13127 1097 aa5.76□□□□□ -1.49
SMCHD1-208ENST00000583344 FSCN1Q16658 493 aaKnown RBP5.76□□□□□ -1.49
SMCHD1-208ENST00000583344 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.76□□□□□ -1.49
SMCHD1-208ENST00000583344 MST1LQ2TV78 715 aa5.76□□□□□ -1.49
SMCHD1-208ENST00000583344 STRIP1Q5VSL9 837 aa5.76□□□□□ -1.49
SMCHD1-208ENST00000583344 PDZD4Q76G19 769 aaPredicted RBP5.76□□□□□ -1.49
SMCHD1-208ENST00000583344 TRMT2AQ8IZ69 625 aaKnown RBP5.76□□□□□ -1.49
SMCHD1-208ENST00000583344 ZFP28Q8NHY6 868 aa5.76□□□□□ -1.49
SMCHD1-208ENST00000583344 FPGT-TNNI3KV9GXZ4 949 aa5.76□□□□□ -1.49
SMCHD1-208ENST00000583344 RPTORQ8N122 1335 aa5.75□□□□□ -1.49
SMCHD1-208ENST00000583344 PIPSLA2A3N6 862 aa5.75□□□□□ -1.49
SMCHD1-208ENST00000583344 CXorf49A8MYA2 514 aaPredicted RBP5.75□□□□□ -1.49
SMCHD1-208ENST00000583344 MASP2O00187 686 aa5.75□□□□□ -1.49
SMCHD1-208ENST00000583344 HKR1P10072 659 aa5.75□□□□□ -1.49
SMCHD1-208ENST00000583344 ENPP1P22413 925 aa5.75□□□□□ -1.49
SMCHD1-208ENST00000583344 PTPN7P35236 360 aa5.75□□□□□ -1.49
SMCHD1-208ENST00000583344 AVPR1BP47901 424 aa5.75□□□□□ -1.49
SMCHD1-208ENST00000583344 SEC24CP53992 1094 aa5.75□□□□□ -1.49
SMCHD1-208ENST00000583344 ATXN7L2Q5T6C5 722 aaPredicted RBP5.75□□□□□ -1.49
SMCHD1-208ENST00000583344 R3HDMLQ9H3Y0 253 aa5.75□□□□□ -1.49
SMCHD1-208ENST00000583344 MAPRE3Q9UPY8 281 aa5.75□□□□□ -1.49
SMCHD1-208ENST00000583344 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.74□□□□□ -1.49
SMCHD1-208ENST00000583344 DRGXA6NNA5 263 aa5.74□□□□□ -1.49
SMCHD1-208ENST00000583344 AKR1B10O60218 316 aa5.74□□□□□ -1.49
SMCHD1-208ENST00000583344 HLA-DOAP06340 250 aa5.74□□□□□ -1.49
SMCHD1-208ENST00000583344 PTH2RP49190 550 aa5.74□□□□□ -1.49
SMCHD1-208ENST00000583344 CLRN1P58418 232 aa5.74□□□□□ -1.49
SMCHD1-208ENST00000583344 RAP2BP61225 183 aa5.74□□□□□ -1.49
SMCHD1-208ENST00000583344 DHCR24Q15392 516 aa5.74□□□□□ -1.49
SMCHD1-208ENST00000583344 AGAP9Q5VTM2 703 aa5.74□□□□□ -1.49
SMCHD1-208ENST00000583344 CMIPQ8IY22 773 aa5.74□□□□□ -1.49
SMCHD1-208ENST00000583344 OR56A1Q8NGH5 318 aa5.74□□□□□ -1.49
SMCHD1-208ENST00000583344 TSPEARQ8WU66 669 aa5.74□□□□□ -1.49
SMCHD1-208ENST00000583344 TGFBRAP1Q8WUH2 860 aa5.74□□□□□ -1.49
SMCHD1-208ENST00000583344 RIN2Q8WYP3 895 aaPredicted RBP5.74□□□□□ -1.49
SMCHD1-208ENST00000583344 COQ10AQ96MF6 247 aa5.74□□□□□ -1.49
SMCHD1-208ENST00000583344 IFT22Q9H7X7 185 aa5.74□□□□□ -1.49
SMCHD1-208ENST00000583344 ELANEP08246 267 aa5.73□□□□□ -1.49
SMCHD1-208ENST00000583344 ITGAMP11215 1152 aa5.73□□□□□ -1.49
SMCHD1-208ENST00000583344 SESN3P58005 492 aa5.73□□□□□ -1.49
SMCHD1-208ENST00000583344 STRN3Q13033 797 aa5.73□□□□□ -1.49
SMCHD1-208ENST00000583344 FAM47AQ5JRC9 791 aa5.73□□□□□ -1.49
SMCHD1-208ENST00000583344 Q6ZVL8 140 aa5.73□□□□□ -1.49
SMCHD1-208ENST00000583344 ZNF572Q7Z3I7 529 aaPredicted RBP5.73□□□□□ -1.49
SMCHD1-208ENST00000583344 RD3Q7Z3Z2 195 aa5.73□□□□□ -1.49
SMCHD1-208ENST00000583344 RNF180Q86T96 592 aa5.73□□□□□ -1.49
SMCHD1-208ENST00000583344 SLC44A3Q8N4M1 653 aa5.73□□□□□ -1.49
SMCHD1-208ENST00000583344 UBR7Q8N806 425 aa5.73□□□□□ -1.49
SMCHD1-208ENST00000583344 PAWRQ96IZ0 340 aaKnown RBP5.73□□□□□ -1.49
SMCHD1-208ENST00000583344 ACAP3Q96P50 834 aa5.73□□□□□ -1.49
SMCHD1-208ENST00000583344 QRSL1Q9H0R6 528 aaKnown RBP5.73□□□□□ -1.49
SMCHD1-208ENST00000583344 PNPLA7Q6ZV29 1317 aa5.73□□□□□ -1.49
SMCHD1-208ENST00000583344 ATRNL1Q5VV63 1379 aa5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 PJA2O43164 708 aa5.72□□□□□ -1.49
SMCHD1-208ENST00000583344 PHF2O75151 1096 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms