RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 CBWD1Q9BRT8 395 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 KIFC3Q9BVG8 833 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 KCNK9Q9NPC2 374 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 A0A1W2PRG0 241 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 RPL13P26373 211 aaKnown RBP11.24□□□□□ -0.61
TOP3A-214ENST00000582981 SERPINB4P48594 390 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 HYIQ5T013 277 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 RASIP1Q5U651 963 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 EPM2AIP1Q7L775 607 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-214ENST00000582981 SH3BP5LQ7L8J4 393 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 DNAJC9Q8WXX5 260 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 AMNQ9BXJ7 453 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 GPR88Q9GZN0 384 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 GPRC5CQ9NQ84 441 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 SUCLA2Q9P2R7 463 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-214ENST00000582981 SCOCQ9UIL1 159 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 USH1CQ9Y6N9 552 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 EMSYQ7Z589 1322 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 RREB1Q92766 1687 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 NPTXRO95502 500 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 COMTP21964 271 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 PSMC2P35998 433 aaKnown RBP11.24□□□□□ -0.61
TOP3A-214ENST00000582981 RCN2Q14257 317 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 CCDC6Q16204 474 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 DBN1Q16643 649 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 VSIG1Q86XK7 387 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 SLF2Q8IX21 1173 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 PPM1KQ8N3J5 372 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 NEK9Q8TD19 979 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 DHX38Q92620 1227 aaKnown RBP11.24□□□□□ -0.61
TOP3A-214ENST00000582981 RBM17Q96I25 401 aaKnown RBP11.24□□□□□ -0.61
TOP3A-214ENST00000582981 ERP44Q9BS26 406 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 MMADHCQ9H3L0 296 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-214ENST00000582981 TDRD3Q9H7E2 651 aaKnown RBP11.24□□□□□ -0.61
TOP3A-214ENST00000582981 SUDS3Q9H7L9 328 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-214ENST00000582981 ARHGEF3Q9NR81 526 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 FBXO28Q9NVF7 368 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 RHBDL2Q9NX52 303 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 VAV3Q9UKW4 847 aa11.24□□□□□ -0.61
TOP3A-214ENST00000582981 hCG_1984214I3L0E3 225 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 SGPL1O95470 568 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 ARP10275 920 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 PYGMP11217 842 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 ATP6V1C1P21283 382 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 SMARCA1P28370 1054 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 POU5F1Q01860 360 aaKnown RBP11.23□□□□□ -0.61
TOP3A-214ENST00000582981 BNIP1Q12981 228 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 ORC2Q13416 577 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-214ENST00000582981 KIAA1755Q5JYT7 1200 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 ZDHHC24Q6UX98 284 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 ZC3H18Q86VM9 953 aaKnown RBP11.23□□□□□ -0.61
TOP3A-214ENST00000582981 NCAPG2Q86XI2 1143 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 CDAN1Q8IWY9 1227 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 ZNF713Q8N859 430 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-214ENST00000582981 PRELID2Q8N945 189 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 ACER1Q8TDN7 264 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 SPIRE2Q8WWL2 714 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 TLCD1Q96CP7 247 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 TOPORSQ9NS56 1045 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-214ENST00000582981 ADAMTSL1Q8N6G6 1762 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 CCDC188H7C350 402 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 K7ENM7 598 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 PPEF1O14829 653 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-214ENST00000582981 SPOPO43791 374 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 PIAS1O75925 651 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 SLITRK3O94933 977 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 GH1P01241 217 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 CALB2P22676 271 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 PRKCIP41743 596 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 CRKP46108 304 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 PTDSS1P48651 473 aaKnown RBP11.23□□□□□ -0.61
TOP3A-214ENST00000582981 SOX10P56693 466 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 PPP3CAQ08209 521 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 ZNF449Q6P9G9 518 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 HS2ST1Q7LGA3 356 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 CCNJLQ8IV13 435 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 SLFN12Q8IYM2 578 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 CENPTQ96BT3 561 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 RMDN2Q96LZ7 410 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 RNPEPL1Q9HAU8 725 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 AGPAT3Q9NRZ7 376 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 HOMER2Q9NSB8 354 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 SBF2Q86WG5 1849 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 RPTORQ8N122 1335 aa11.23□□□□□ -0.61
TOP3A-214ENST00000582981 CLRN2A0PK11 232 aa11.22□□□□□ -0.61
TOP3A-214ENST00000582981 CCDC169A6NNP5 214 aa11.22□□□□□ -0.61
TOP3A-214ENST00000582981 CLDN3O15551 220 aa11.22□□□□□ -0.61
TOP3A-214ENST00000582981 CYP26A1O43174 497 aa11.22□□□□□ -0.61
TOP3A-214ENST00000582981 ATP6V1G1O75348 118 aa11.22□□□□□ -0.61
TOP3A-214ENST00000582981 CYP3A4P08684 503 aa11.22□□□□□ -0.61
TOP3A-214ENST00000582981 MMP13P45452 471 aa11.22□□□□□ -0.61
TOP3A-214ENST00000582981 PEX5P50542 639 aa11.22□□□□□ -0.61
TOP3A-214ENST00000582981 C1QTNF12Q5T7M4 302 aa11.22□□□□□ -0.61
TOP3A-214ENST00000582981 LMBRD2Q68DH5 695 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-214ENST00000582981 CCDC137Q6PK04 289 aaKnown RBP11.22□□□□□ -0.61
TOP3A-214ENST00000582981 PPP4R3CPQ6ZMV5 832 aa11.22□□□□□ -0.61
TOP3A-214ENST00000582981 TAB3Q8N5C8 712 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-214ENST00000582981 GBP7Q8N8V2 638 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-214ENST00000582981 SUPT20HQ8NEM7 779 aa11.22□□□□□ -0.61
TOP3A-214ENST00000582981 ZFAND2BQ8WV99 257 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms