RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 ANKRD62A6NC57 917 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 DDNO94850 711 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TCF4P15884 667 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 VPS41P49754 854 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 PLTPP55058 493 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 OSTNP61366 133 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ORC1Q13415 861 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 C10orf76Q5T2E6 689 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 GJC2Q5T442 439 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ANKS1BQ7Z6G8 1248 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 FAM71AQ8IYT1 594 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 LRRC71Q8N4P6 559 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 PBKQ96KB5 322 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ISCUQ9H1K1 167 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 APOBEC3GQ9HC16 384 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 RAB20Q9NX57 234 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 PSD3Q9NYI0 1048 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 PAPPA2Q9BXP8 1791 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 MYO1FO00160 1098 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CLDN3O15551 220 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 HOXA7P31268 230 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 KRT76Q01546 638 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 POU5F1Q01860 360 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ZNF844Q08AG5 666 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 VGLL4Q14135 290 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TDRD10Q5VZ19 366 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 RASGEF1CQ8N431 466 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 PRELID2Q8N945 189 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 NEK9Q8TD19 979 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 COPS5Q92905 334 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 KLRG1Q96E93 195 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 HEMGNQ9BXL5 484 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CAPS2Q9BXY5 557 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CALCOCO1Q9P1Z2 691 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CNOT8Q9UFF9 292 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 DOCK1Q14185 1865 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ARID2Q68CP9 1835 aa11.5□□□□□ -0.57
CDK5RAP3-225ENST00000582482 GRIN3BO60391 1043 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TNNI1P19237 187 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CTNNA1P35221 906 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SLCO1A2P46721 670 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 JAK3P52333 1124 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 POLGP54098 1239 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 BIRC3Q13489 604 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 EMC2Q15006 297 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 KRT39Q6A163 491 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ABHD15Q6UXT9 468 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 NIPA1Q7RTP0 329 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ANKRD35Q8N283 1001 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ZNF564Q8TBZ8 553 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 MDM1Q8TC05 714 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 NSUN6Q8TEA1 469 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 DDX1Q92499 740 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 PCYT2Q99447 389 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 FBXO40Q9UH90 709 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 RRP15Q9Y3B9 282 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 H0YGN5 161 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 FZD9O00144 591 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SPOPO43791 374 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ARIH2O95376 493 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 VNN1O95497 513 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ITGBL1O95965 494 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 FGFR4P22455 802 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 GLRA2P23416 452 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 RRM1P23921 792 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SMTNP53814 917 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 GPC5P78333 572 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 DR1Q01658 176 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CRELD2Q6UXH1 353 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SCARA5Q6ZMJ2 495 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 GADL1Q6ZQY3 521 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CATSPERGQ6ZRH7 1159 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 NCAPG2Q86XI2 1143 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 MSL3Q8N5Y2 521 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 FBXO25Q8TCJ0 367 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 BCAS4Q8TDM0 211 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SHC3Q92529 594 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CYFIP2Q96F07 1278 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 NFS1Q9Y697 457 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 MCM3APO60318 1980 aa11.49□□□□□ -0.57
CDK5RAP3-225ENST00000582482 A0A0A6YYK5 440 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 LYPLA2O95372 231 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TNFRSF8P28908 595 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 LIG4P49917 911 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 IFI16Q16666 785 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ATP13A4Q4VNC1 1196 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 GLE1Q53GS7 698 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 WDR78Q5VTH9 848 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 FBXL13Q8NEE6 735 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 OTUD5Q96G74 571 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ZSWIM1Q9BR11 485 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TEX13BQ9BXU2 312 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ELP3Q9H9T3 547 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 USTQ9Y2C2 406 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 R3HDM2Q9Y2K5 976 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TLDC2A0PJX2 215 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SRGAP2CP0DJJ0 459 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 RARAP10276 462 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CD58P19256 250 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 MUTP22033 750 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms