RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 SYCP3Q8IZU3 236 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 FIBCD1Q8N539 461 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 HELQQ8TDG4 1101 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 CDT1Q9H211 546 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 NXF3Q9H4D5 531 aaKnown RBP13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 RSAD1Q9HA92 442 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 SLC28A3Q9HAS3 691 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 GIT1Q9Y2X7 761 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 PCDHA5Q9Y5H7 936 aa13.18□□□□□ -0.3
SNRPD1-204ENST00000582475 HNRNPDLO14979 420 aaKnown RBP13.17□□□□□ -0.3
SNRPD1-204ENST00000582475 EIF3DO15371 548 aaKnown RBP eCLIP13.17□□□□□ -0.31e-9■□□□□ 9.1
SNRPD1-204ENST00000582475 RHOBTB3O94955 611 aa13.17□□□□□ -0.3
SNRPD1-204ENST00000582475 HARSP12081 509 aaKnown RBP13.17□□□□□ -0.3
SNRPD1-204ENST00000582475 MCL1Q07820 350 aa13.17□□□□□ -0.3
SNRPD1-204ENST00000582475 SLFN12LQ6IEE8 588 aa13.17□□□□□ -0.3
SNRPD1-204ENST00000582475 SLC39A4Q6P5W5 647 aa13.17□□□□□ -0.3
SNRPD1-204ENST00000582475 GLB1LQ6UWU2 654 aa13.17□□□□□ -0.3
SNRPD1-204ENST00000582475 THNSL1Q8IYQ7 743 aa13.17□□□□□ -0.3
SNRPD1-204ENST00000582475 SCFD1Q8WVM8 642 aa13.17□□□□□ -0.3
SNRPD1-204ENST00000582475 ERCC4Q92889 916 aaPredicted RBP13.17□□□□□ -0.3
SNRPD1-204ENST00000582475 SMARCE1Q969G3 411 aa13.17□□□□□ -0.3
SNRPD1-204ENST00000582475 HAPLN2Q9GZV7 340 aa13.17□□□□□ -0.3
SNRPD1-204ENST00000582475 RC3H2Q9HBD1 1191 aaKnown RBP13.17□□□□□ -0.3
SNRPD1-204ENST00000582475 PTPRSQ13332 1948 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 LINC01553A4QN01 128 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 ARHGEF15O94989 841 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 HOXD13P35453 343 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 GRM5P41594 1212 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 FXR1P51114 621 aaKnown RBP eCLIP13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 OSTNP61366 133 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 TAP1Q03518 808 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 NOLC1Q14978 699 aaKnown RBP eCLIP13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 NOMO2Q5JPE7 1267 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 PPP2R2DQ66LE6 453 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 LRRC55Q6ZSA7 311 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 NELFCDQ8IXH7 590 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 CEP120Q8N960 986 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 KIAA0895Q8NCT3 520 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 SPATA20Q8TB22 786 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 ACAP3Q96P50 834 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 GSDMAQ96QA5 445 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 GAD1Q99259 594 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 CCDC94Q9BW85 323 aaPredicted RBP13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 IKZF4Q9H2S9 585 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 TYW1Q9NV66 732 aaKnown RBP13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 RMND1Q9NWS8 449 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 MIOSQ9NXC5 875 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 KLK14Q9P0G3 267 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 KANSL3Q9P2N6 904 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 ANKFY1Q9P2R3 1169 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 LHX6Q9UPM6 363 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 INPP5FQ9Y2H2 1132 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 GDAQ9Y2T3 454 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 STYXL1Q9Y6J8 313 aa13.16□□□□□ -0.3
SNRPD1-204ENST00000582475 A0A0B4J269 797 aa13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 ARL5CA6NH57 179 aa13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 TISP43B9A030 160 aa13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 ADSSP30520 456 aa13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 MCM4P33991 863 aa13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 AFF1P51825 1210 aaKnown RBP13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 CAMK4Q16566 473 aa13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 KYAT1Q16773 422 aa13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 KNOP1Q1ED39 458 aaKnown RBP13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 BMT2Q1RMZ1 405 aa13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 SEZ6Q53EL9 994 aa13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 SPOUT1Q5T280 376 aaKnown RBP13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 TMEM192Q8IY95 271 aa13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 URGCPQ8TCY9 931 aa13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 RSPH1Q8WYR4 309 aa13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 POMGNT1Q8WZA1 660 aa13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 TGS1Q96RS0 853 aaKnown RBP13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 MSTO1Q9BUK6 570 aa13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 GBP3Q9H0R5 595 aa13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 SEMA6BQ9H3T3 888 aa13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 ZNF576Q9H609 170 aa13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 CWH43Q9H720 699 aa13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 MRPL42Q9Y6G3 142 aaKnown RBP13.15□□□□□ -0.3
SNRPD1-204ENST00000582475 UBE4BO95155 1302 aa13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 TMEM265A0A087WTH1 108 aa13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 OGTO15294 1046 aa13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 RECQL4O94761 1208 aa13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 KIF20AO95235 890 aa13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 POMCP01189 267 aa13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 CLTAP09496 248 aa13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 GARTP22102 1010 aa13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 MLH1P40692 756 aa13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 YARSP54577 528 aaKnown RBP13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 ERVK-21P61565 698 aa13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 SNRPFP62306 86 aaKnown RBP13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 ZNF697Q5TEC3 545 aa13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 ISM2Q6H9L7 571 aa13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 GPT2Q8TD30 523 aa13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 ZFP42Q96MM3 310 aa13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 SAMD11Q96NU1 681 aa13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 FAM193BQ96PV7 902 aaPredicted RBP13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 MRPL9Q9BYD2 267 aaKnown RBP13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 TTYH1Q9H313 450 aaPredicted RBP13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 PCIF1Q9H4Z3 704 aa13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 CERS4Q9HA82 394 aa13.14□□□□□ -0.31
SNRPD1-204ENST00000582475 MAN1B1Q9UKM7 699 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms