RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 CACNA1IQ9P0X4 2223 aa7□□□□□ -1.29
TVP23B-210ENST00000582288 CHD8Q9HCK8 2581 aa7□□□□□ -1.29
TVP23B-210ENST00000582288 MYH15Q9Y2K3 1946 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 MTCL1Q9Y4B5 1905 aaKnown RBP6.99□□□□□ -1.29
TVP23B-210ENST00000582288 SMCO2A6NFE2 343 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 SH2B2O14492 632 aaPredicted RBP6.99□□□□□ -1.29
TVP23B-210ENST00000582288 XYLBO75191 536 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 MAFO75444 373 aaPredicted RBP6.99□□□□□ -1.29
TVP23B-210ENST00000582288 PAPSS2O95340 614 aaPredicted RBP6.99□□□□□ -1.29
TVP23B-210ENST00000582288 HOXA6P31267 233 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 AFF1P51825 1210 aaKnown RBP6.99□□□□□ -1.29
TVP23B-210ENST00000582288 JAK3P52333 1124 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 PRKCEQ02156 737 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 DRP2Q13474 957 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 SIM2Q14190 667 aaPredicted RBP6.99□□□□□ -1.29
TVP23B-210ENST00000582288 UVSSAQ2YD98 709 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 XKR3Q5GH77 459 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 N4BP2L1Q5TBK1 243 aaPredicted RBP6.99□□□□□ -1.29
TVP23B-210ENST00000582288 LIN9Q5TKA1 542 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 IL31Q6EBC2 164 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 C1orf228Q6PIY5 440 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 TSSK4Q6SA08 328 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 NFXL1Q6ZNB6 911 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 TPRG1Q6ZUI0 275 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 CATSPER4Q7RTX7 472 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 SRGAP1Q7Z6B7 1085 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 GRASPQ7Z6J2 395 aaPredicted RBP6.99□□□□□ -1.29
TVP23B-210ENST00000582288 SGMS1Q86VZ5 419 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 PALB2Q86YC2 1186 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 EXOC8Q8IYI6 725 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 CMTR1Q8N1G2 835 aaKnown RBP6.99□□□□□ -1.29
TVP23B-210ENST00000582288 CCDC51Q96ER9 411 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 LOXL4Q96JB6 756 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 IL25Q9H293 177 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 IFT122Q9HBG6 1241 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 AVENQ9NQS1 362 aaPredicted RBP6.99□□□□□ -1.29
TVP23B-210ENST00000582288 DISC1Q9NRI5 854 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 RBM28Q9NW13 759 aaKnown RBP6.99□□□□□ -1.29
TVP23B-210ENST00000582288 GDE1Q9NZC3 331 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 FBXW11Q9UKB1 542 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 PPME1Q9Y570 386 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 SLC12A7Q9Y666 1083 aa6.99□□□□□ -1.29
TVP23B-210ENST00000582288 MYH9P35579 1960 aaKnown RBP6.99□□□□□ -1.29
TVP23B-210ENST00000582288 GPR179Q6PRD1 2367 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 ESYT2A0FGR8 921 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 ARL5CA6NH57 179 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 SHISA7A6NL88 538 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 SOBPA7XYQ1 873 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 PRC1O43663 620 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 CSDE1O75534 798 aaKnown RBP6.98□□□□□ -1.29
TVP23B-210ENST00000582288 MICAL2O94851 1124 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 POMCP01189 267 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 SPATA31D3P0C874 917 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 CD72P21854 359 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 HOXA11P31270 313 aaPredicted RBP6.98□□□□□ -1.29
TVP23B-210ENST00000582288 OR1G1P47890 313 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 NUCB1Q02818 461 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 PTH1RQ03431 593 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 LONRF3Q496Y0 759 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 UBXN11Q5T124 520 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 PDXDC1Q6P996 788 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 SPATA31D4Q6ZUB0 917 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 TRMT1LQ7Z2T5 733 aaKnown RBP6.98□□□□□ -1.29
TVP23B-210ENST00000582288 RHPN2Q8IUC4 686 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 MAP4K1Q92918 833 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 ELSPBP1Q96BH3 223 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 MSANTD3Q96H12 275 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 PGBD1Q96JS3 809 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 ZNF668Q96K58 619 aaPredicted RBP6.98□□□□□ -1.29
TVP23B-210ENST00000582288 EPAS1Q99814 870 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 SUCLA2Q9P2R7 463 aaPredicted RBP6.98□□□□□ -1.29
TVP23B-210ENST00000582288 DAXXQ9UER7 740 aaPredicted RBP6.98□□□□□ -1.29
TVP23B-210ENST00000582288 RALYQ9UKM9 306 aaKnown RBP6.98□□□□□ -1.29
TVP23B-210ENST00000582288 CNTNAP5Q8WYK1 1306 aa6.98□□□□□ -1.29
TVP23B-210ENST00000582288 hCG_1642624A0A1W2PR95 340 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 ASAP2O43150 1006 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 STBD1O95210 358 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 ZNF806P0C7X5 589 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 ITGA4P13612 1032 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 AXLP30530 894 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 ATRXP46100 2492 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 CXCL12P48061 93 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 FUT2Q10981 343 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 PRR16Q569H4 304 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 PPM1LQ5SGD2 360 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 FUT10Q6P4F1 479 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 UNQ6494/PRO21346Q6UXR6 183 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 SYNE3Q6ZMZ3 975 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.97□□□□□ -1.29
TVP23B-210ENST00000582288 LONP2Q86WA8 852 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 NPAS3Q8IXF0 933 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 HACE1Q8IYU2 909 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 SPEM1Q8N4L4 309 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 CCDC82Q8N4S0 544 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 SMG8Q8ND04 991 aaKnown RBP6.97□□□□□ -1.29
TVP23B-210ENST00000582288 CCDC12Q8WUD4 166 aaPredicted RBP6.97□□□□□ -1.29
TVP23B-210ENST00000582288 PIK3R5Q8WYR1 880 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 SLC5A5Q92911 643 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 IRF7Q92985 503 aa6.97□□□□□ -1.29
TVP23B-210ENST00000582288 COL26A1Q96A83 441 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms