RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 GAS7O60861 476 aa5.13□□□□□ -1.59
SMCHD1-206ENST00000581631 CDKL5O76039 1030 aa5.13□□□□□ -1.59
SMCHD1-206ENST00000581631 HLA-DOAP06340 250 aa5.13□□□□□ -1.59
SMCHD1-206ENST00000581631 ITGAMP11215 1152 aa5.13□□□□□ -1.59
SMCHD1-206ENST00000581631 ZNF169Q14929 603 aaPredicted RBP5.13□□□□□ -1.59
SMCHD1-206ENST00000581631 TERF2Q15554 542 aa5.13□□□□□ -1.59
SMCHD1-206ENST00000581631 B3GNTL1Q67FW5 361 aaPredicted RBP5.13□□□□□ -1.59
SMCHD1-206ENST00000581631 PASD1Q8IV76 773 aa5.13□□□□□ -1.59
SMCHD1-206ENST00000581631 SLC44A3Q8N4M1 653 aa5.13□□□□□ -1.59
SMCHD1-206ENST00000581631 SMC1BQ8NDV3 1235 aa5.13□□□□□ -1.59
SMCHD1-206ENST00000581631 PMFBP1Q8TBY8 1022 aa5.13□□□□□ -1.59
SMCHD1-206ENST00000581631 RSAD2Q8WXG1 361 aa5.13□□□□□ -1.59
SMCHD1-206ENST00000581631 TFAP2CQ92754 450 aa5.13□□□□□ -1.59
SMCHD1-206ENST00000581631 SPATA5L1Q9BVQ7 753 aa5.13□□□□□ -1.59
SMCHD1-206ENST00000581631 WNT8AQ9H1J5 351 aa5.13□□□□□ -1.59
SMCHD1-206ENST00000581631 OSBPL2Q9H1P3 480 aa5.13□□□□□ -1.59
SMCHD1-206ENST00000581631 IFT57Q9NWB7 429 aa5.13□□□□□ -1.59
SMCHD1-206ENST00000581631 GPRC5DQ9NZD1 345 aa5.13□□□□□ -1.59
SMCHD1-206ENST00000581631 FOXJ2Q9P0K8 574 aa5.13□□□□□ -1.59
SMCHD1-206ENST00000581631 DRGXA6NNA5 263 aa5.12□□□□□ -1.59
SMCHD1-206ENST00000581631 KPNA6O60684 536 aa5.12□□□□□ -1.59
SMCHD1-206ENST00000581631 FDXRP22570 491 aa5.12□□□□□ -1.59
SMCHD1-206ENST00000581631 FLT3LGP49771 235 aa5.12□□□□□ -1.59
SMCHD1-206ENST00000581631 CHN2P52757 468 aa5.12□□□□□ -1.59
SMCHD1-206ENST00000581631 DDB1Q16531 1140 aa5.12□□□□□ -1.59
SMCHD1-206ENST00000581631 PRAMEF14Q5SWL7 426 aa5.12□□□□□ -1.59
SMCHD1-206ENST00000581631 RHOT2Q8IXI1 618 aa5.12□□□□□ -1.59
SMCHD1-206ENST00000581631 SLC35B2Q8TB61 432 aa5.12□□□□□ -1.59
SMCHD1-206ENST00000581631 MDM1Q8TC05 714 aa5.12□□□□□ -1.59
SMCHD1-206ENST00000581631 CAGE1Q8TC20 777 aa5.12□□□□□ -1.59
SMCHD1-206ENST00000581631 SH3TC2Q8TF17 1288 aa5.12□□□□□ -1.59
SMCHD1-206ENST00000581631 KLHL11Q9NVR0 708 aa5.12□□□□□ -1.59
SMCHD1-206ENST00000581631 POGKQ9P215 609 aa5.12□□□□□ -1.59
SMCHD1-206ENST00000581631 WNT10BO00744 389 aa5.11□□□□□ -1.59
SMCHD1-206ENST00000581631 PJA2O43164 708 aa5.11□□□□□ -1.59
SMCHD1-206ENST00000581631 ASMTLO95671 621 aa5.11□□□□□ -1.59
SMCHD1-206ENST00000581631 GASTP01350 101 aa5.11□□□□□ -1.59
SMCHD1-206ENST00000581631 CTSSP25774 331 aa5.11□□□□□ -1.59
SMCHD1-206ENST00000581631 RARRES1P49788 294 aa5.11□□□□□ -1.59
SMCHD1-206ENST00000581631 TMEM132CQ8N3T6 1108 aa5.11□□□□□ -1.59
SMCHD1-206ENST00000581631 OR14C36Q8NHC7 312 aa5.11□□□□□ -1.59
SMCHD1-206ENST00000581631 Q96MF0 132 aa5.11□□□□□ -1.59
SMCHD1-206ENST00000581631 DUSP26Q9BV47 211 aa5.11□□□□□ -1.59
SMCHD1-206ENST00000581631 TMEM74BQ9NUR3 256 aa5.11□□□□□ -1.59
SMCHD1-206ENST00000581631 SPTLC3Q9NUV7 552 aa5.11□□□□□ -1.59
SMCHD1-206ENST00000581631 CDY2AQ9Y6F7 541 aa5.11□□□□□ -1.59
SMCHD1-206ENST00000581631 MYADML2A6NDP7 307 aa5.1□□□□□ -1.59
SMCHD1-206ENST00000581631 CGB1A6NKQ9 187 aa5.1□□□□□ -1.59
SMCHD1-206ENST00000581631 CXorf49A8MYA2 514 aaPredicted RBP5.1□□□□□ -1.59
SMCHD1-206ENST00000581631 PRAMEF4O60810 478 aa5.1□□□□□ -1.59
SMCHD1-206ENST00000581631 FOSP01100 380 aaPredicted RBP5.1□□□□□ -1.59
SMCHD1-206ENST00000581631 LSP1P33241 339 aa5.1□□□□□ -1.59
SMCHD1-206ENST00000581631 CRHR1P34998 444 aa5.1□□□□□ -1.59
SMCHD1-206ENST00000581631 KPNA1P52294 538 aaPredicted RBP5.1□□□□□ -1.59
SMCHD1-206ENST00000581631 ATRNL1Q5VV63 1379 aa5.1□□□□□ -1.59
SMCHD1-206ENST00000581631 Q6ZNX1 250 aa5.1□□□□□ -1.59
SMCHD1-206ENST00000581631 PNPLA7Q6ZV29 1317 aa5.1□□□□□ -1.59
SMCHD1-206ENST00000581631 BHLHA9Q7RTU4 235 aa5.1□□□□□ -1.59
SMCHD1-206ENST00000581631 C1QL2Q7Z5L3 287 aa5.1□□□□□ -1.59
SMCHD1-206ENST00000581631 OR56A1Q8NGH5 318 aa5.1□□□□□ -1.59
SMCHD1-206ENST00000581631 ZFP28Q8NHY6 868 aa5.1□□□□□ -1.59
SMCHD1-206ENST00000581631 PDLIM2Q96JY6 352 aa5.1□□□□□ -1.59
SMCHD1-206ENST00000581631 KAT6AQ92794 2004 aa5.09□□□□□ -1.59
SMCHD1-206ENST00000581631 CCDC78A2IDD5 438 aa5.09□□□□□ -1.59
SMCHD1-206ENST00000581631 LRRC3CA6NJW4 275 aa5.09□□□□□ -1.59
SMCHD1-206ENST00000581631 ADCY6O43306 1168 aa5.09□□□□□ -1.59
SMCHD1-206ENST00000581631 OCA2Q04671 838 aa5.09□□□□□ -1.59
SMCHD1-206ENST00000581631 SEPT7Q16181 437 aaKnown RBP5.09□□□□□ -1.59
SMCHD1-206ENST00000581631 FAM47AQ5JRC9 791 aa5.09□□□□□ -1.59
SMCHD1-206ENST00000581631 PITRM1Q5JRX3 1037 aa5.09□□□□□ -1.59
SMCHD1-206ENST00000581631 HDGFL2Q7Z4V5 671 aaPredicted RBP5.09□□□□□ -1.59
SMCHD1-206ENST00000581631 MAPKAPK5Q8IW41 473 aa5.09□□□□□ -1.59
SMCHD1-206ENST00000581631 RNF181Q9P0P0 153 aa5.09□□□□□ -1.59
SMCHD1-206ENST00000581631 DNAJC9-AS1A6NH13 148 aa5.08□□□□□ -1.6
SMCHD1-206ENST00000581631 LSSP48449 732 aa5.08□□□□□ -1.6
SMCHD1-206ENST00000581631 CACNA2D1P54289 1103 aa5.08□□□□□ -1.6
SMCHD1-206ENST00000581631 CLRN1P58418 232 aa5.08□□□□□ -1.6
SMCHD1-206ENST00000581631 PCBP1Q15365 356 aaKnown RBP eCLIP5.08□□□□□ -1.6
SMCHD1-206ENST00000581631 MST1LQ2TV78 715 aa5.08□□□□□ -1.6
SMCHD1-206ENST00000581631 ATXN7L2Q5T6C5 722 aaPredicted RBP5.08□□□□□ -1.6
SMCHD1-206ENST00000581631 SP5Q6BEB4 398 aaPredicted RBP5.08□□□□□ -1.6
SMCHD1-206ENST00000581631 MICALCLQ6ZW33 695 aa5.08□□□□□ -1.6
SMCHD1-206ENST00000581631 PDZD4Q76G19 769 aaPredicted RBP5.08□□□□□ -1.6
SMCHD1-206ENST00000581631 ZNF572Q7Z3I7 529 aaPredicted RBP5.08□□□□□ -1.6
SMCHD1-206ENST00000581631 LRRTM3Q86VH5 581 aa5.08□□□□□ -1.6
SMCHD1-206ENST00000581631 SYNPOQ8N3V7 929 aa5.08□□□□□ -1.6
SMCHD1-206ENST00000581631 ZNF480Q8WV37 535 aa5.08□□□□□ -1.6
SMCHD1-206ENST00000581631 C1QTNF7Q9BXJ2 289 aa5.08□□□□□ -1.6
SMCHD1-206ENST00000581631 ANO3Q9BYT9 981 aa5.08□□□□□ -1.6
SMCHD1-206ENST00000581631 ATP11BQ9Y2G3 1177 aa5.08□□□□□ -1.6
SMCHD1-206ENST00000581631 PROP1O75360 226 aa5.07□□□□□ -1.6
SMCHD1-206ENST00000581631 ADCYAP1R1P41586 468 aa5.07□□□□□ -1.6
SMCHD1-206ENST00000581631 PROK1P58294 105 aa5.07□□□□□ -1.6
SMCHD1-206ENST00000581631 NFE2L2Q16236 605 aa5.07□□□□□ -1.6
SMCHD1-206ENST00000581631 EPHA10Q5JZY3 1008 aa5.07□□□□□ -1.6
SMCHD1-206ENST00000581631 FRMD7Q6ZUT3 714 aa5.07□□□□□ -1.6
SMCHD1-206ENST00000581631 TRMT2AQ8IZ69 625 aaKnown RBP5.07□□□□□ -1.6
SMCHD1-206ENST00000581631 SH2D3CQ8N5H7 860 aa5.07□□□□□ -1.6
SMCHD1-206ENST00000581631 SCARB1Q8WTV0 552 aa5.07□□□□□ -1.6
SMCHD1-206ENST00000581631 NACC2Q96BF6 587 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms