RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 RPS9P46781 194 aaKnown RBP14.19□□□□□ -0.14
SS18-219ENST00000581570 PTENP60484 403 aa14.19□□□□□ -0.14
SS18-219ENST00000581570 NTRK3Q16288 839 aa14.19□□□□□ -0.14
SS18-219ENST00000581570 RTP2Q5QGT7 225 aa14.19□□□□□ -0.14
SS18-219ENST00000581570 TPRG1Q6ZUI0 275 aa14.19□□□□□ -0.14
SS18-219ENST00000581570 GSTCDQ8NEC7 633 aa14.19□□□□□ -0.14
SS18-219ENST00000581570 BRF1Q92994 677 aa14.19□□□□□ -0.14
SS18-219ENST00000581570 CHAMP1Q96JM3 812 aa14.19□□□□□ -0.14
SS18-219ENST00000581570 CLSTN3Q9BQT9 956 aa14.19□□□□□ -0.14
SS18-219ENST00000581570 FAM126AQ9BYI3 521 aaPredicted RBP14.19□□□□□ -0.14
SS18-219ENST00000581570 SLKQ9H2G2 1235 aaPredicted RBP14.19□□□□□ -0.14
SS18-219ENST00000581570 NXF3Q9H4D5 531 aaKnown RBP14.19□□□□□ -0.14
SS18-219ENST00000581570 PARD6AQ9NPB6 346 aa14.19□□□□□ -0.14
SS18-219ENST00000581570 SH3GLB2Q9NR46 395 aa14.19□□□□□ -0.14
SS18-219ENST00000581570 SF3B1O75533 1304 aaKnown RBP eCLIP14.18□□□□□ -0.144e-6■■■■■ 96
SS18-219ENST00000581570 INO80B-WBP1J3KQ70 363 aa14.18□□□□□ -0.14
SS18-219ENST00000581570 GRIK3Q13003 919 aa14.18□□□□□ -0.14
SS18-219ENST00000581570 PPP2R5CQ13362 524 aa14.18□□□□□ -0.14
SS18-219ENST00000581570 HSP90AA2PQ14568 343 aaPredicted RBP14.18□□□□□ -0.14
SS18-219ENST00000581570 EMC2Q15006 297 aa14.18□□□□□ -0.14
SS18-219ENST00000581570 MOXD1Q6UVY6 613 aa14.18□□□□□ -0.14
SS18-219ENST00000581570 ZNF852Q6ZMS4 543 aa14.18□□□□□ -0.14
SS18-219ENST00000581570 OTUD6AQ7L8S5 288 aa14.18□□□□□ -0.14
SS18-219ENST00000581570 TTPALQ9BTX7 342 aa14.18□□□□□ -0.14
SS18-219ENST00000581570 PRMT8Q9NR22 394 aaPredicted RBP14.18□□□□□ -0.14
SS18-219ENST00000581570 KLK14Q9P0G3 267 aa14.18□□□□□ -0.14
SS18-219ENST00000581570 WRAP73Q9P2S5 460 aaPredicted RBP14.18□□□□□ -0.14
SS18-219ENST00000581570 PARP2Q9UGN5 583 aa14.18□□□□□ -0.14
SS18-219ENST00000581570 DDX25Q9UHL0 483 aaKnown RBP14.18□□□□□ -0.14
SS18-219ENST00000581570 RAB23Q9ULC3 237 aa14.18□□□□□ -0.14
SS18-219ENST00000581570 PCDHA4Q9UN74 947 aa14.18□□□□□ -0.14
SS18-219ENST00000581570 MRPS17Q9Y2R5 130 aaKnown RBP14.18□□□□□ -0.14
SS18-219ENST00000581570 COL4A3Q01955 1670 aa14.17□□□□□ -0.14
SS18-219ENST00000581570 IFNAR1P17181 557 aa14.17□□□□□ -0.14
SS18-219ENST00000581570 YWHABP31946 246 aaKnown RBP14.17□□□□□ -0.14
SS18-219ENST00000581570 ADCY1Q08828 1119 aa14.17□□□□□ -0.14
SS18-219ENST00000581570 SPEM2Q0P670 501 aa14.17□□□□□ -0.14
SS18-219ENST00000581570 MTAPQ13126 283 aa14.17□□□□□ -0.14
SS18-219ENST00000581570 FZD5Q13467 585 aa14.17□□□□□ -0.14
SS18-219ENST00000581570 MXD4Q14582 209 aaPredicted RBP14.17□□□□□ -0.14
SS18-219ENST00000581570 PSMD5Q16401 504 aa14.17□□□□□ -0.14
SS18-219ENST00000581570 XKR9Q5GH70 373 aa14.17□□□□□ -0.14
SS18-219ENST00000581570 PPM1JQ5JR12 505 aa14.17□□□□□ -0.14
SS18-219ENST00000581570 FAM171A1Q5VUB5 890 aa14.17□□□□□ -0.14
SS18-219ENST00000581570 CEP57Q86XR8 500 aa14.17□□□□□ -0.14
SS18-219ENST00000581570 NPAS3Q8IXF0 933 aa14.17□□□□□ -0.14
SS18-219ENST00000581570 C4orf19Q8IY42 314 aa14.17□□□□□ -0.14
SS18-219ENST00000581570 LNX1Q8TBB1 728 aaPredicted RBP14.17□□□□□ -0.14
SS18-219ENST00000581570 HASPINQ8TF76 798 aa14.17□□□□□ -0.14
SS18-219ENST00000581570 PIK3R5Q8WYR1 880 aa14.17□□□□□ -0.14
SS18-219ENST00000581570 MTRQ99707 1265 aa14.17□□□□□ -0.14
SS18-219ENST00000581570 CACNG4Q9UBN1 327 aa14.17□□□□□ -0.14
SS18-219ENST00000581570 VAV3Q9UKW4 847 aa14.17□□□□□ -0.14
SS18-219ENST00000581570 KCNH3Q9ULD8 1083 aa14.17□□□□□ -0.14
SS18-219ENST00000581570 NID2Q14112 1375 aa14.17□□□□□ -0.14
SS18-219ENST00000581570 TPRP12270 2363 aaKnown RBP14.16□□□□□ -0.14
SS18-219ENST00000581570 EPG5Q9HCE0 2579 aa14.16□□□□□ -0.14
SS18-219ENST00000581570 ECI2O75521 394 aa14.16□□□□□ -0.14
SS18-219ENST00000581570 NPTXRO95502 500 aa14.16□□□□□ -0.14
SS18-219ENST00000581570 ARF4P18085 180 aaPredicted RBP14.16□□□□□ -0.14
SS18-219ENST00000581570 NRLP54845 237 aa14.16□□□□□ -0.14
SS18-219ENST00000581570 TFDP1Q14186 410 aa14.16□□□□□ -0.14
SS18-219ENST00000581570 EPHA7Q15375 998 aa14.16□□□□□ -0.14
SS18-219ENST00000581570 LPAL2Q16609 132 aa14.16□□□□□ -0.14
SS18-219ENST00000581570 AMHR2Q16671 573 aa14.16□□□□□ -0.14
SS18-219ENST00000581570 UVSSAQ2YD98 709 aa14.16□□□□□ -0.14
SS18-219ENST00000581570 PABPC1LQ4VXU2 614 aaKnown RBP14.16□□□□□ -0.14
SS18-219ENST00000581570 AXDND1Q5T1B0 1012 aaPredicted RBP14.16□□□□□ -0.14
SS18-219ENST00000581570 IFNLR1Q8IU57 520 aaPredicted RBP14.16□□□□□ -0.14
SS18-219ENST00000581570 BLIDQ8IZY5 108 aa14.16□□□□□ -0.14
SS18-219ENST00000581570 CELF5Q8N6W0 485 aaKnown RBP14.16□□□□□ -0.14
SS18-219ENST00000581570 SLC7A14Q8TBB6 771 aa14.16□□□□□ -0.14
SS18-219ENST00000581570 NETO1Q8TDF5 533 aa14.16□□□□□ -0.14
SS18-219ENST00000581570 ING5Q8WYH8 240 aa14.16□□□□□ -0.14
SS18-219ENST00000581570 MCRS1Q96EZ8 462 aa14.16□□□□□ -0.14
SS18-219ENST00000581570 FAM20AQ96MK3 541 aa14.16□□□□□ -0.14
SS18-219ENST00000581570 PAAF1Q9BRP4 392 aa14.16□□□□□ -0.14
SS18-219ENST00000581570 PLA2G2FQ9BZM2 168 aa14.16□□□□□ -0.14
SS18-219ENST00000581570 HEBP1Q9NRV9 189 aa14.16□□□□□ -0.14
SS18-219ENST00000581570 HCFC1R1Q9NWW0 138 aa14.16□□□□□ -0.14
SS18-219ENST00000581570 DNMT3BQ9UBC3 853 aaKnown RBP14.16□□□□□ -0.14
SS18-219ENST00000581570 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.16□□□□□ -0.14
SS18-219ENST00000581570 KMT2BQ9UMN6 2715 aaPredicted RBP14.16□□□□□ -0.14
SS18-219ENST00000581570 MTCL1Q9Y4B5 1905 aaKnown RBP14.15□□□□□ -0.14
SS18-219ENST00000581570 CASTOR2A6NHX0 329 aa14.15□□□□□ -0.14
SS18-219ENST00000581570 SLC30A4O14863 429 aa14.15□□□□□ -0.14
SS18-219ENST00000581570 ZBTB39O15060 712 aa14.15□□□□□ -0.14
SS18-219ENST00000581570 ADAM12O43184 909 aa14.15□□□□□ -0.14
SS18-219ENST00000581570 SLC37A4O43826 429 aa14.15□□□□□ -0.14
SS18-219ENST00000581570 POU2F2P09086 479 aa14.15□□□□□ -0.14
SS18-219ENST00000581570 MBTD1Q05BQ5 628 aa14.15□□□□□ -0.14
SS18-219ENST00000581570 POU5F1BQ06416 359 aa14.15□□□□□ -0.14
SS18-219ENST00000581570 TUSC3Q13454 348 aa14.15□□□□□ -0.14
SS18-219ENST00000581570 LAIR1Q6GTX8 287 aa14.15□□□□□ -0.14
SS18-219ENST00000581570 PDXDC1Q6P996 788 aa14.15□□□□□ -0.14
SS18-219ENST00000581570 SLC27A1Q6PCB7 646 aa14.15□□□□□ -0.14
SS18-219ENST00000581570 CDR2LQ86X02 465 aaPredicted RBP14.15□□□□□ -0.14
SS18-219ENST00000581570 LXNQ9BS40 222 aa14.15□□□□□ -0.14
SS18-219ENST00000581570 RGL1Q9NZL6 768 aa14.15□□□□□ -0.14
SS18-219ENST00000581570 MRPS23Q9Y3D9 190 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms