RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 CPSF3Q9UKF6 684 aaKnown RBP11.99□□□□□ -0.49
SKA2-206ENST00000581068 LUC7L2Q9Y383 392 aaKnown RBP11.99□□□□□ -0.49
SKA2-206ENST00000581068 CDY2AQ9Y6F7 541 aa11.99□□□□□ -0.49
SKA2-206ENST00000581068 TTC26A0AVF1 554 aa11.98□□□□□ -0.49
SKA2-206ENST00000581068 LRRIQ3A6PVS8 624 aaPredicted RBP11.98□□□□□ -0.49
SKA2-206ENST00000581068 ARVCFO00192 962 aa11.98□□□□□ -0.49
SKA2-206ENST00000581068 TULP1O00294 542 aaPredicted RBP11.98□□□□□ -0.49
SKA2-206ENST00000581068 FAM189A1O60320 539 aa11.98□□□□□ -0.49
SKA2-206ENST00000581068 MFAP3LO75121 409 aa11.98□□□□□ -0.49
SKA2-206ENST00000581068 CAND2O75155 1236 aa11.98□□□□□ -0.49
SKA2-206ENST00000581068 CLTAP09496 248 aa11.98□□□□□ -0.49
SKA2-206ENST00000581068 GCLMP48507 274 aa11.98□□□□□ -0.49
SKA2-206ENST00000581068 FXR1P51114 621 aaKnown RBP eCLIP11.98□□□□□ -0.49
SKA2-206ENST00000581068 ADKP55263 362 aaKnown RBP11.98□□□□□ -0.49
SKA2-206ENST00000581068 PPP3CAQ08209 521 aa11.98□□□□□ -0.49
SKA2-206ENST00000581068 TSR1Q2NL82 804 aaKnown RBP11.98□□□□□ -0.49
SKA2-206ENST00000581068 DCAF4L1Q3SXM0 396 aa11.98□□□□□ -0.49
SKA2-206ENST00000581068 ZBTB41Q5SVQ8 909 aa11.98□□□□□ -0.49
SKA2-206ENST00000581068 NOTUMQ6P988 496 aa11.98□□□□□ -0.49
SKA2-206ENST00000581068 CDR2LQ86X02 465 aaPredicted RBP11.98□□□□□ -0.49
SKA2-206ENST00000581068 THNSL1Q8IYQ7 743 aa11.98□□□□□ -0.49
SKA2-206ENST00000581068 TC2NQ8N9U0 490 aa11.98□□□□□ -0.49
SKA2-206ENST00000581068 EHBP1Q8NDI1 1231 aa11.98□□□□□ -0.49
SKA2-206ENST00000581068 PANX2Q96RD6 677 aa11.98□□□□□ -0.49
SKA2-206ENST00000581068 TMEM8AQ9HCN3 771 aa11.98□□□□□ -0.49
SKA2-206ENST00000581068 PLCB1Q9NQ66 1216 aa11.98□□□□□ -0.49
SKA2-206ENST00000581068 FAM207AQ9NSI2 230 aaPredicted RBP11.98□□□□□ -0.49
SKA2-206ENST00000581068 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.98□□□□□ -0.49
SKA2-206ENST00000581068 FRMPD3Q5JV73 1810 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 HAX1O00165 279 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 IL18RAPO95256 599 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 TFRCP02786 760 aaKnown RBP11.97□□□□□ -0.49
SKA2-206ENST00000581068 HSPA1AP0DMV8 641 aaKnown RBP11.97□□□□□ -0.49
SKA2-206ENST00000581068 HSPA1BP0DMV9 641 aaKnown RBP11.97□□□□□ -0.49
SKA2-206ENST00000581068 DLATP10515 647 aaKnown RBP11.97□□□□□ -0.49
SKA2-206ENST00000581068 TNNI1P19237 187 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 SLC9A1P19634 815 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 PON1P27169 355 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 HOXA11P31270 313 aaPredicted RBP11.97□□□□□ -0.49
SKA2-206ENST00000581068 KRT9P35527 623 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 THPOP40225 353 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 TNFSF9P41273 254 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 MXI1P50539 228 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 AP3M2P53677 418 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 CLDN10P78369 228 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 ZBED6P86452 979 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 GOLGA8FQ08AF8 430 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 MGAT3Q09327 533 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 GOLGA8DPQ0D2H9 430 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 TRIM71Q2Q1W2 868 aaKnown RBP11.97□□□□□ -0.49
SKA2-206ENST00000581068 CBWD6Q4V339 395 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 SEZ6Q53EL9 994 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 CBWD3Q5JTY5 395 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 FAM26DQ5JW98 314 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 CBWD5Q5RIA9 395 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 KRT39Q6A163 491 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 SLC27A1Q6PCB7 646 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 CACNA2D4Q7Z3S7 1137 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 CCDC112Q8NEF3 446 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 OR8K1Q8NGG5 319 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 TMEM40Q8WWA1 233 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 WNT8BQ93098 351 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 ARMC5Q96C12 935 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 ZNF333Q96JL9 665 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 CGRRF1Q99675 332 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 TTYH3Q9C0H2 523 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 SENP6Q9GZR1 1112 aaPredicted RBP11.97□□□□□ -0.49
SKA2-206ENST00000581068 TMEM117Q9H0C3 514 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 INTS2Q9H0H0 1204 aaKnown RBP11.97□□□□□ -0.49
SKA2-206ENST00000581068 KCNF1Q9H3M0 494 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 RPF1Q9H9Y2 349 aaKnown RBP11.97□□□□□ -0.49
SKA2-206ENST00000581068 PDE11AQ9HCR9 933 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 TRMT13Q9NUP7 481 aaKnown RBP11.97□□□□□ -0.49
SKA2-206ENST00000581068 AGPAT5Q9NUQ2 364 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 GCNT4Q9P109 453 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 CEP72Q9P209 647 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 SSUH2Q9Y2M2 353 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 NOC2LQ9Y3T9 749 aaKnown RBP11.97□□□□□ -0.49
SKA2-206ENST00000581068 DAAM1Q9Y4D1 1078 aa11.97□□□□□ -0.49
SKA2-206ENST00000581068 TRIP12Q14669 1992 aaPredicted RBP11.97□□□□□ -0.49
SKA2-206ENST00000581068 RNF225M0QZC1 329 aaPredicted RBP11.96□□□□□ -0.49
SKA2-206ENST00000581068 RPS6KA5O75582 802 aa11.96□□□□□ -0.49
SKA2-206ENST00000581068 SGPL1O95470 568 aa11.96□□□□□ -0.49
SKA2-206ENST00000581068 NPTXRO95502 500 aa11.96□□□□□ -0.49
SKA2-206ENST00000581068 CHRNA1P02708 482 aa11.96□□□□□ -0.49
SKA2-206ENST00000581068 CTSHP09668 335 aa11.96□□□□□ -0.49
SKA2-206ENST00000581068 STAG3L1P0CL83 205 aa11.96□□□□□ -0.49
SKA2-206ENST00000581068 GRM5P41594 1212 aa11.96□□□□□ -0.49
SKA2-206ENST00000581068 CDK7P50613 346 aa11.96□□□□□ -0.49
SKA2-206ENST00000581068 LRMPQ12912 555 aa11.96□□□□□ -0.49
SKA2-206ENST00000581068 EPC2Q52LR7 807 aa11.96□□□□□ -0.49
SKA2-206ENST00000581068 KLHDC7AQ5VTJ3 777 aa11.96□□□□□ -0.49
SKA2-206ENST00000581068 DHX38Q92620 1227 aaKnown RBP11.96□□□□□ -0.49
SKA2-206ENST00000581068 POP1Q99575 1024 aaKnown RBP11.96□□□□□ -0.49
SKA2-206ENST00000581068 CRISPLD2Q9H0B8 497 aa11.96□□□□□ -0.49
SKA2-206ENST00000581068 TRPV6Q9H1D0 765 aa11.96□□□□□ -0.49
SKA2-206ENST00000581068 NUCKS1Q9H1E3 243 aaKnown RBP11.96□□□□□ -0.49
SKA2-206ENST00000581068 GANQ9H2C0 597 aa11.96□□□□□ -0.49
SKA2-206ENST00000581068 TMX1Q9H3N1 280 aa11.96□□□□□ -0.49
SKA2-206ENST00000581068 TOPORSQ9NS56 1045 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms