RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 CCDC148Q8NFR7 591 aa16.38■□□□□ 0.21
IFT20-211ENST00000580991 ITFG1Q8TB96 612 aa16.38■□□□□ 0.21
IFT20-211ENST00000580991 NAP1L2Q9ULW6 460 aaPredicted RBP16.38■□□□□ 0.21
IFT20-211ENST00000580991 HES2Q9Y543 173 aa16.38■□□□□ 0.21
IFT20-211ENST00000580991 PPME1Q9Y570 386 aa16.38■□□□□ 0.21
IFT20-211ENST00000580991 CCL16O15467 120 aa16.37■□□□□ 0.21
IFT20-211ENST00000580991 ASAP2O43150 1006 aa16.37■□□□□ 0.21
IFT20-211ENST00000580991 PRPF3O43395 683 aaKnown RBP16.37■□□□□ 0.21
IFT20-211ENST00000580991 TADA2AO75478 443 aa16.37■□□□□ 0.21
IFT20-211ENST00000580991 NPEPPSP55786 919 aa16.37■□□□□ 0.21
IFT20-211ENST00000580991 DMWDQ09019 674 aa16.37■□□□□ 0.21
IFT20-211ENST00000580991 RTP2Q5QGT7 225 aa16.37■□□□□ 0.21
IFT20-211ENST00000580991 MAMSTRQ6ZN01 415 aa16.37■□□□□ 0.21
IFT20-211ENST00000580991 NPAS3Q8IXF0 933 aa16.37■□□□□ 0.21
IFT20-211ENST00000580991 DDX1Q92499 740 aaKnown RBP16.37■□□□□ 0.21
IFT20-211ENST00000580991 TMEM143Q96AN5 459 aa16.37■□□□□ 0.21
IFT20-211ENST00000580991 CLSTN3Q9BQT9 956 aa16.37■□□□□ 0.21
IFT20-211ENST00000580991 TRIM6Q9C030 488 aaPredicted RBP16.37■□□□□ 0.21
IFT20-211ENST00000580991 DHX33Q9H6R0 707 aaKnown RBP16.37■□□□□ 0.21
IFT20-211ENST00000580991 ANO2Q9NQ90 1003 aa16.37■□□□□ 0.21
IFT20-211ENST00000580991 HEBP1Q9NRV9 189 aa16.37■□□□□ 0.21
IFT20-211ENST00000580991 ANGPTL2Q9UKU9 493 aa16.37■□□□□ 0.21
IFT20-211ENST00000580991 KCNH3Q9ULD8 1083 aa16.37■□□□□ 0.21
IFT20-211ENST00000580991 SF3B1O75533 1304 aaKnown RBP eCLIP16.37■□□□□ 0.21
IFT20-211ENST00000580991 TSPAN1O60635 241 aa16.36■□□□□ 0.21
IFT20-211ENST00000580991 DKC1O60832 514 aaKnown RBP eCLIP16.36■□□□□ 0.21
IFT20-211ENST00000580991 ECI2O75521 394 aa16.36■□□□□ 0.21
IFT20-211ENST00000580991 POU2F2P09086 479 aa16.36■□□□□ 0.21
IFT20-211ENST00000580991 TDGF1P13385 188 aa16.36■□□□□ 0.21
IFT20-211ENST00000580991 RFC5P40937 340 aa16.36■□□□□ 0.21
IFT20-211ENST00000580991 QARSP47897 775 aaKnown RBP16.36■□□□□ 0.21
IFT20-211ENST00000580991 PABPC1LQ4VXU2 614 aaKnown RBP16.36■□□□□ 0.21
IFT20-211ENST00000580991 GSTCDQ8NEC7 633 aa16.36■□□□□ 0.21
IFT20-211ENST00000580991 TBCKQ8TEA7 893 aa16.36■□□□□ 0.21
IFT20-211ENST00000580991 TCP11Q8WWU5 503 aa16.36■□□□□ 0.21
IFT20-211ENST00000580991 PIK3R5Q8WYR1 880 aa16.36■□□□□ 0.21
IFT20-211ENST00000580991 CEP170P1Q96L14 293 aa16.36■□□□□ 0.21
IFT20-211ENST00000580991 ESYT1Q9BSJ8 1104 aa16.36■□□□□ 0.21
IFT20-211ENST00000580991 IER2Q9BTL4 223 aa16.36■□□□□ 0.21
IFT20-211ENST00000580991 TTPALQ9BTX7 342 aa16.36■□□□□ 0.21
IFT20-211ENST00000580991 APOL6Q9BWW8 343 aa16.36■□□□□ 0.21
IFT20-211ENST00000580991 CSRNP2Q9H175 543 aa16.36■□□□□ 0.21
IFT20-211ENST00000580991 SEMA4GQ9NTN9 838 aa16.36■□□□□ 0.21
IFT20-211ENST00000580991 FRYQ5TBA9 3013 aa16.36■□□□□ 0.21
IFT20-211ENST00000580991 NOTCH4Q99466 2003 aa16.36■□□□□ 0.21
IFT20-211ENST00000580991 CYP3A7-CYP3A51PA0A087WV96 503 aa16.35■□□□□ 0.21
IFT20-211ENST00000580991 FOXD2O60548 495 aaPredicted RBP16.35■□□□□ 0.21
IFT20-211ENST00000580991 CYP3A7P24462 503 aa16.35■□□□□ 0.21
IFT20-211ENST00000580991 AKAP17AQ02040 695 aaKnown RBP16.35■□□□□ 0.21
IFT20-211ENST00000580991 GRIK3Q13003 919 aa16.35■□□□□ 0.21
IFT20-211ENST00000580991 HSP90AA2PQ14568 343 aaPredicted RBP16.35■□□□□ 0.21
IFT20-211ENST00000580991 PSMD5Q16401 504 aa16.35■□□□□ 0.21
IFT20-211ENST00000580991 CSRP2Q16527 193 aa16.35■□□□□ 0.21
IFT20-211ENST00000580991 UVSSAQ2YD98 709 aa16.35■□□□□ 0.21
IFT20-211ENST00000580991 PRR23CQ6ZRP0 262 aa16.35■□□□□ 0.21
IFT20-211ENST00000580991 PRR23BQ6ZRT6 265 aa16.35■□□□□ 0.21
IFT20-211ENST00000580991 FERMT3Q86UX7 667 aa16.35■□□□□ 0.21
IFT20-211ENST00000580991 ZNF579Q8NAF0 562 aaKnown RBP16.35■□□□□ 0.21
IFT20-211ENST00000580991 SLC7A14Q8TBB6 771 aa16.35■□□□□ 0.21
IFT20-211ENST00000580991 RABGGTAQ92696 567 aa16.35■□□□□ 0.21
IFT20-211ENST00000580991 DNASE1L2Q92874 299 aa16.35■□□□□ 0.21
IFT20-211ENST00000580991 CPB2Q96IY4 423 aa16.35■□□□□ 0.21
IFT20-211ENST00000580991 C22orf23Q9BZE7 217 aa16.35■□□□□ 0.21
IFT20-211ENST00000580991 CHRDQ9H2X0 955 aa16.35■□□□□ 0.21
IFT20-211ENST00000580991 GDE1Q9NZC3 331 aa16.35■□□□□ 0.21
IFT20-211ENST00000580991 SHISA7A6NL88 538 aa16.34■□□□□ 0.21
IFT20-211ENST00000580991 MAN2B1O00754 1011 aa16.34■□□□□ 0.21
IFT20-211ENST00000580991 CCR3P51677 355 aa16.34■□□□□ 0.21
IFT20-211ENST00000580991 AXDND1Q5T1B0 1012 aaPredicted RBP16.34■□□□□ 0.21
IFT20-211ENST00000580991 FAM171A1Q5VUB5 890 aa16.34■□□□□ 0.21
IFT20-211ENST00000580991 PDXDC1Q6P996 788 aa16.34■□□□□ 0.21
IFT20-211ENST00000580991 RTL10Q7L3V2 364 aa16.34■□□□□ 0.21
IFT20-211ENST00000580991 CEP57Q86XR8 500 aa16.34■□□□□ 0.21
IFT20-211ENST00000580991 LNX1Q8TBB1 728 aaPredicted RBP16.34■□□□□ 0.21
IFT20-211ENST00000580991 ETNPPLQ8TBG4 499 aa16.34■□□□□ 0.21
IFT20-211ENST00000580991 ING5Q8WYH8 240 aa16.34■□□□□ 0.21
IFT20-211ENST00000580991 NXF3Q9H4D5 531 aaKnown RBP16.34■□□□□ 0.21
IFT20-211ENST00000580991 HCFC1R1Q9NWW0 138 aa16.34■□□□□ 0.21
IFT20-211ENST00000580991 NDRG2Q9UN36 371 aaKnown RBP16.34■□□□□ 0.21
IFT20-211ENST00000580991 MRPS23Q9Y3D9 190 aaKnown RBP16.34■□□□□ 0.21
IFT20-211ENST00000580991 ZMYM2Q9UBW7 1377 aa16.34■□□□□ 0.21
IFT20-211ENST00000580991 TDP2O95551 362 aa16.33■□□□□ 0.2
IFT20-211ENST00000580991 KCNA4P22459 653 aa16.33■□□□□ 0.2
IFT20-211ENST00000580991 AKAP5P24588 427 aa16.33■□□□□ 0.2
IFT20-211ENST00000580991 PTENP60484 403 aa16.33■□□□□ 0.2
IFT20-211ENST00000580991 FGD1P98174 961 aa16.33■□□□□ 0.2
IFT20-211ENST00000580991 SIM2Q14190 667 aaPredicted RBP16.33■□□□□ 0.2
IFT20-211ENST00000580991 MXD4Q14582 209 aaPredicted RBP16.33■□□□□ 0.2
IFT20-211ENST00000580991 EMC2Q15006 297 aa16.33■□□□□ 0.2
IFT20-211ENST00000580991 ZNF687Q8N1G0 1237 aa16.33■□□□□ 0.2
IFT20-211ENST00000580991 ELSPBP1Q96BH3 223 aa16.33■□□□□ 0.2
IFT20-211ENST00000580991 PLA2G2FQ9BZM2 168 aa16.33■□□□□ 0.2
IFT20-211ENST00000580991 BMP2KQ9NSY1 1161 aaPredicted RBP16.33■□□□□ 0.2
IFT20-211ENST00000580991 VPS54Q9P1Q0 977 aa16.33■□□□□ 0.2
IFT20-211ENST00000580991 DNMT3BQ9UBC3 853 aaKnown RBP16.33■□□□□ 0.2
IFT20-211ENST00000580991 RALYQ9UKM9 306 aaKnown RBP16.33■□□□□ 0.2
IFT20-211ENST00000580991 SDK1Q7Z5N4 2213 aa16.33■□□□□ 0.2
IFT20-211ENST00000580991 ZZEF1O43149 2961 aa16.32■□□□□ 0.2
IFT20-211ENST00000580991 INO80B-WBP1J3KQ70 363 aa16.32■□□□□ 0.2
IFT20-211ENST00000580991 EML1O00423 815 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms