RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 GRIK3Q13003 919 aa20.46■□□□□ 0.87
PPP4R1-215ENST00000580182 COL19A1Q14993 1142 aa20.46■□□□□ 0.87
PPP4R1-215ENST00000580182 SEZ6Q53EL9 994 aa20.46■□□□□ 0.87
PPP4R1-215ENST00000580182 ZC2HC1CQ53FD0 456 aaPredicted RBP20.46■□□□□ 0.87
PPP4R1-215ENST00000580182 RESP18Q5W5W9 173 aa20.46■□□□□ 0.87
PPP4R1-215ENST00000580182 MPZL3Q6UWV2 235 aa20.46■□□□□ 0.87
PPP4R1-215ENST00000580182 TMC7Q7Z402 723 aa20.46■□□□□ 0.87
PPP4R1-215ENST00000580182 LEO1Q8WVC0 666 aaPredicted RBP20.46■□□□□ 0.87
PPP4R1-215ENST00000580182 PABPC5Q96DU9 382 aaKnown RBP20.46■□□□□ 0.87
PPP4R1-215ENST00000580182 MARCH5Q9NX47 278 aa20.46■□□□□ 0.87
PPP4R1-215ENST00000580182 ZMYM2Q9UBW7 1377 aa20.46■□□□□ 0.87
PPP4R1-215ENST00000580182 VCANP13611 3396 aa20.45■□□□□ 0.86
PPP4R1-215ENST00000580182 H0YCG3 227 aa20.45■□□□□ 0.86
PPP4R1-215ENST00000580182 TOM1L1O75674 476 aa20.45■□□□□ 0.86
PPP4R1-215ENST00000580182 MCF2P10911 925 aa20.45■□□□□ 0.86
PPP4R1-215ENST00000580182 LTBRP36941 435 aa20.45■□□□□ 0.86
PPP4R1-215ENST00000580182 GRM5P41594 1212 aa20.45■□□□□ 0.86
PPP4R1-215ENST00000580182 KRT85P78386 507 aa20.45■□□□□ 0.86
PPP4R1-215ENST00000580182 DLX2Q07687 328 aaPredicted RBP20.45■□□□□ 0.86
PPP4R1-215ENST00000580182 CTC1Q2NKJ3 1217 aa20.45■□□□□ 0.86
PPP4R1-215ENST00000580182 GLRA4Q5JXX5 417 aa20.45■□□□□ 0.86
PPP4R1-215ENST00000580182 DDX53Q86TM3 631 aaKnown RBP20.45■□□□□ 0.86
PPP4R1-215ENST00000580182 VPS52Q8N1B4 723 aa20.45■□□□□ 0.86
PPP4R1-215ENST00000580182 AUTS2Q8WXX7 1259 aa20.45■□□□□ 0.86
PPP4R1-215ENST00000580182 KCNN1Q92952 543 aa20.45■□□□□ 0.86
PPP4R1-215ENST00000580182 BICD1Q96G01 975 aa20.45■□□□□ 0.86
PPP4R1-215ENST00000580182 SPATA32Q96LK8 384 aa20.45■□□□□ 0.86
PPP4R1-215ENST00000580182 PAAF1Q9BRP4 392 aa20.45■□□□□ 0.86
PPP4R1-215ENST00000580182 ZBP1Q9H171 429 aa20.45■□□□□ 0.86
PPP4R1-215ENST00000580182 TLE6Q9H808 572 aa20.45■□□□□ 0.86
PPP4R1-215ENST00000580182 TBC1D7Q9P0N9 293 aa20.45■□□□□ 0.86
PPP4R1-215ENST00000580182 H3BQ06 376 aaPredicted RBP20.44■□□□□ 0.86
PPP4R1-215ENST00000580182 POLR2DO15514 142 aaKnown RBP20.44■□□□□ 0.86
PPP4R1-215ENST00000580182 MEFVO15553 781 aaPredicted RBP20.44■□□□□ 0.86
PPP4R1-215ENST00000580182 IDEP14735 1019 aa20.44■□□□□ 0.86
PPP4R1-215ENST00000580182 RBM10P98175 930 aaKnown RBP20.44■□□□□ 0.86
PPP4R1-215ENST00000580182 GTF2BQ00403 316 aa20.44■□□□□ 0.86
PPP4R1-215ENST00000580182 ADAM15Q13444 863 aa20.44■□□□□ 0.86
PPP4R1-215ENST00000580182 NAB2Q15742 525 aa20.44■□□□□ 0.86
PPP4R1-215ENST00000580182 TJAP1Q5JTD0 557 aa20.44■□□□□ 0.86
PPP4R1-215ENST00000580182 PDE12Q6L8Q7 609 aaKnown RBP20.44■□□□□ 0.86
PPP4R1-215ENST00000580182 ZPBP2Q6X784 338 aa20.44■□□□□ 0.86
PPP4R1-215ENST00000580182 APBB1IPQ7Z5R6 666 aaPredicted RBP20.44■□□□□ 0.86
PPP4R1-215ENST00000580182 IKZF4Q9H2S9 585 aa20.44■□□□□ 0.86
PPP4R1-215ENST00000580182 NGRNQ9NPE2 291 aaKnown RBP20.44■□□□□ 0.86
PPP4R1-215ENST00000580182 FAM13BQ9NYF5 915 aa20.44■□□□□ 0.86
PPP4R1-215ENST00000580182 BRWD1Q9NSI6 2320 aa20.43■□□□□ 0.86
PPP4R1-215ENST00000580182 CASTOR2A6NHX0 329 aa20.43■□□□□ 0.86
PPP4R1-215ENST00000580182 THP07101 528 aa20.43■□□□□ 0.86
PPP4R1-215ENST00000580182 CA8P35219 290 aa20.43■□□□□ 0.86
PPP4R1-215ENST00000580182 MATR3P43243 847 aaKnown RBP eCLIP20.43■□□□□ 0.869e-6■■■■□ 21.7
PPP4R1-215ENST00000580182 LIG4P49917 911 aa20.43■□□□□ 0.86
PPP4R1-215ENST00000580182 NOLC1Q14978 699 aaKnown RBP eCLIP20.43■□□□□ 0.86
PPP4R1-215ENST00000580182 SLC39A4Q6P5W5 647 aa20.43■□□□□ 0.86
PPP4R1-215ENST00000580182 TAS1R1Q7RTX1 841 aa20.43■□□□□ 0.86
PPP4R1-215ENST00000580182 ZNF720Q7Z2F6 126 aa20.43■□□□□ 0.86
PPP4R1-215ENST00000580182 IQUBQ8NA54 791 aa20.43■□□□□ 0.86
PPP4R1-215ENST00000580182 PPP2R3CQ969Q6 453 aa20.43■□□□□ 0.86
PPP4R1-215ENST00000580182 CCDC94Q9BW85 323 aaPredicted RBP20.43■□□□□ 0.86
PPP4R1-215ENST00000580182 FGFBP2Q9BYJ0 223 aa20.43■□□□□ 0.86
PPP4R1-215ENST00000580182 TNMDQ9H2S6 317 aa20.43■□□□□ 0.86
PPP4R1-215ENST00000580182 KBTBD4Q9NVX7 518 aa20.43■□□□□ 0.86
PPP4R1-215ENST00000580182 FRMD3A2A2Y4 597 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 CARNS1A5YM72 827 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 C2orf71A6NGG8 1288 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 TISP43B9A030 160 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 HNRNPDLO14979 420 aaKnown RBP20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 CLDN3O15551 220 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 TBX10O75333 385 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 CXCL14O95715 111 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 GLP2RO95838 553 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 PIGRP01833 764 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 BMP1P13497 986 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 CASP1P29466 404 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 MCL1Q07820 350 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 TUSC3Q13454 348 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 SMC1AQ14683 1233 aaKnown RBP20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 DUSP6Q16828 381 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 TPRNQ4KMQ1 711 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 HERC4Q5GLZ8 1057 aaPredicted RBP20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 ALKAL1Q6UXT8 129 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 MAP4K3Q8IVH8 894 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 EFHBQ8N7U6 833 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 MRPL43Q8N983 215 aaKnown RBP20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 VN1R2Q8NFZ6 395 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 ACAP3Q96P50 834 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 COL25A1Q9BXS0 654 aaPredicted RBP20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 CUEDC2Q9H467 287 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 ST6GALNAC4Q9H4F1 302 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 MRPL44Q9H9J2 332 aaKnown RBP20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 GDPD2Q9HCC8 539 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 PANK4Q9NVE7 773 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 ATP6V1DQ9Y5K8 247 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 TCHHQ07283 1943 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 TRIP11Q15643 1979 aa20.42■□□□□ 0.86
PPP4R1-215ENST00000580182 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.41■□□□□ 0.86
PPP4R1-215ENST00000580182 A0A1B0GVL5 298 aa20.41■□□□□ 0.86
PPP4R1-215ENST00000580182 ANKRD63C9JTQ0 380 aa20.41■□□□□ 0.86
PPP4R1-215ENST00000580182 NCK2O43639 380 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms