RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 COPS5Q92905 334 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 CDK5RAP3Q96JB5 506 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 TBATAQ96M53 351 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 FGD4Q96M96 766 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 KLHL25Q9H0H3 589 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 GPRC5CQ9NQ84 441 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 ANLNQ9NQW6 1124 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 TRMT13Q9NUP7 481 aaKnown RBP3.75□□□□□ -1.81
KPNB1-208ENST00000580019 MKS1Q9NXB0 559 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 AKT3Q9Y243 479 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 DGKBQ9Y6T7 804 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 EIF4G3O43432 1585 aaKnown RBP3.75□□□□□ -1.81
KPNB1-208ENST00000580019 CLASP1Q7Z460 1538 aa3.75□□□□□ -1.81
KPNB1-208ENST00000580019 hCG_1642624A0A1W2PR95 340 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 B3GALT2O43825 422 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 DLX3O60479 287 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 ZFPL1O95159 310 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 CRTAMO95727 393 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 SRGNP10124 158 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 HSD3B1P14060 373 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 ZKSCAN1P17029 563 aaPredicted RBP3.74□□□□□ -1.81
KPNB1-208ENST00000580019 RHCEP18577 417 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 HOXC12P31275 282 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 ADCYAP1R1P41586 468 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 LSSP48449 732 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 RHDQ02161 417 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 MAP4K2Q12851 820 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 ELF2Q15723 593 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 DACT2Q5SW24 774 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 IFIT1BQ5T764 474 aaKnown RBP3.74□□□□□ -1.81
KPNB1-208ENST00000580019 PPP4R3AQ6IN85 833 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 IQCEQ6IPM2 695 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 MZT2AQ6P582 158 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 CNPY4Q8N129 248 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 ANKRD35Q8N283 1001 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 NKAPQ8N5F7 415 aaKnown RBP3.74□□□□□ -1.81
KPNB1-208ENST00000580019 POF1BQ8WVV4 589 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 RCC1LQ96I51 464 aaKnown RBP3.74□□□□□ -1.81
KPNB1-208ENST00000580019 MRGPRX3Q96LB0 322 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 MPHOSPH9Q99550 1183 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 MLST8Q9BVC4 326 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 NAA15Q9BXJ9 866 aaKnown RBP3.74□□□□□ -1.81
KPNB1-208ENST00000580019 SLC12A5Q9H2X9 1139 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 SMOC1Q9H4F8 434 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 FAM204AQ9H8W3 233 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 RSAD1Q9HA92 442 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 CABP5Q9NP86 173 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 SAMD15Q9P1V8 674 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 APEX2Q9UBZ4 518 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 DDX20Q9UHI6 824 aaKnown RBP3.74□□□□□ -1.81
KPNB1-208ENST00000580019 ASAP1Q9ULH1 1129 aa3.74□□□□□ -1.81
KPNB1-208ENST00000580019 KLHL33A6NCF5 533 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 CBX4O00257 560 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 AP1G1O43747 822 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 MYO1BO43795 1136 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 MAFKO60675 156 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 OFD1O75665 1012 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 CPP00450 1065 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 PDE6AP16499 860 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 CALRP27797 417 aaKnown RBP3.73□□□□□ -1.81
KPNB1-208ENST00000580019 BCL6P41182 706 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 KCNJ6P48051 423 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 SCNN1GP51170 649 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 ALDH5A1P51649 535 aaPredicted RBP3.73□□□□□ -1.81
KPNB1-208ENST00000580019 KPNA1P52294 538 aaPredicted RBP3.73□□□□□ -1.81
KPNB1-208ENST00000580019 USP14P54578 494 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 EIF5P55010 431 aaKnown RBP3.73□□□□□ -1.81
KPNB1-208ENST00000580019 GALEQ14376 348 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 TBR1Q16650 682 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 LONRF1Q17RB8 773 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 CCDC93Q567U6 631 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 RRP12Q5JTH9 1297 aaKnown RBP3.73□□□□□ -1.81
KPNB1-208ENST00000580019 SP5Q6BEB4 398 aaPredicted RBP3.73□□□□□ -1.81
KPNB1-208ENST00000580019 XRRA1Q6P2D8 792 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 LVRNQ6Q4G3 990 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 TRIM59Q8IWR1 403 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 TRIM48Q8IWZ4 208 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 SUGP1Q8IWZ8 645 aaKnown RBP3.73□□□□□ -1.81
KPNB1-208ENST00000580019 GPR135Q8IZ08 494 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 PROKR1Q8TCW9 393 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 BTN2A2Q8WVV5 523 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 PGBD4Q96DM1 585 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 CCDC138Q96M89 665 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 RSPH9Q9H1X1 276 aaPredicted RBP3.73□□□□□ -1.81
KPNB1-208ENST00000580019 PRDM13Q9H4Q3 707 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 ARFGAP3Q9NP61 516 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 EMC7Q9NPA0 242 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 EVLQ9UI08 416 aaPredicted RBP3.73□□□□□ -1.81
KPNB1-208ENST00000580019 NOL7Q9UMY1 257 aaKnown RBP3.73□□□□□ -1.81
KPNB1-208ENST00000580019 LRCH1Q9Y2L9 728 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 EMC9Q9Y3B6 208 aa3.73□□□□□ -1.81
KPNB1-208ENST00000580019 BLACEA4D250 179 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 TRIM75PA6NK02 468 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 ZNF891A8MT65 544 aaPredicted RBP3.72□□□□□ -1.81
KPNB1-208ENST00000580019 FZD9O00144 591 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 XPOTO43592 962 aaKnown RBP3.72□□□□□ -1.81
KPNB1-208ENST00000580019 ABHD16AO95870 558 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 ZBED1O96006 694 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 C1RP00736 705 aa3.72□□□□□ -1.81
KPNB1-208ENST00000580019 HRGP04196 525 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms