RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 SPATA32Q96LK8 384 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 UHRF1Q96T88 793 aaPredicted RBP7.18□□□□□ -1.26
TRAF4-213ENST00000578917 CDCA3Q99618 268 aaPredicted RBP7.18□□□□□ -1.26
TRAF4-213ENST00000578917 TMEM175Q9BSA9 504 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 EMILIN2Q9BXX0 1053 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 MRPL44Q9H9J2 332 aaKnown RBP7.18□□□□□ -1.26
TRAF4-213ENST00000578917 MRPL17Q9NRX2 175 aaKnown RBP7.18□□□□□ -1.26
TRAF4-213ENST00000578917 TBC1D7Q9P0N9 293 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 ARHGAP28Q9P2N2 729 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 TBX20Q9UMR3 447 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 GOLGA6L4A6NEF3 574 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 CASTOR2A6NHX0 329 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 HIDE1A8MVS5 230 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 POLR2DO15514 142 aaKnown RBP7.17□□□□□ -1.26
TRAF4-213ENST00000578917 LINC01565O15544 149 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 URODP06132 367 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 BMP1P13497 986 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 GAP43P17677 238 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 KLRC2P26717 231 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 NMT1P30419 496 aaKnown RBP7.17□□□□□ -1.26
TRAF4-213ENST00000578917 SSTR3P32745 418 aaPredicted RBP7.17□□□□□ -1.26
TRAF4-213ENST00000578917 KRT85P78386 507 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 GRIK3Q13003 919 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 ADAM15Q13444 863 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 TUSC3Q13454 348 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 LEXMQ3ZCV2 418 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 ELMSAN1Q6PJG2 1045 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 ZPBP2Q6X784 338 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 ADGRD2Q7Z7M1 963 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 CEP57Q86XR8 500 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 CCDC65Q8IXS2 484 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 COLGALT2Q8IYK4 626 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 CEP57L1Q8IYX8 460 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 NOC3LQ8WTT2 800 aaKnown RBP7.17□□□□□ -1.26
TRAF4-213ENST00000578917 AUTS2Q8WXX7 1259 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 STAMQ92783 540 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 FAM212AQ96EL1 285 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 ZBTB45Q96K62 511 aaPredicted RBP7.17□□□□□ -1.26
TRAF4-213ENST00000578917 PYM1Q9BRP8 204 aaKnown RBP7.17□□□□□ -1.26
TRAF4-213ENST00000578917 MSTO1Q9BUK6 570 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 COL25A1Q9BXS0 654 aaPredicted RBP7.17□□□□□ -1.26
TRAF4-213ENST00000578917 CDT1Q9H211 546 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 SLC38A7Q9NVC3 462 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 PANK4Q9NVE7 773 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 MIOSQ9NXC5 875 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 CD207Q9UJ71 328 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 RCOR1Q9UKL0 485 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 PCDHA7Q9UN72 937 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 EXOC7Q9UPT5 735 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 SSX2IPQ9Y2D8 614 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 PCDHB13Q9Y5F0 798 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 MICAL3Q7RTP6 2002 aa7.17□□□□□ -1.26
TRAF4-213ENST00000578917 MYO7AQ13402 2215 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 SMIM28A0A1B0GU29 152 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 C2orf71A6NGG8 1288 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 MYMKA6NI61 221 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 TRAPPC3O43617 180 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 B3GAT3O94766 335 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 GCNT3O95395 438 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 CLTAP09496 248 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 CTSAP10619 480 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 GRM5P41594 1212 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 NCKAP1LP55160 1127 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 HSP90AA2PQ14568 343 aaPredicted RBP7.16□□□□□ -1.26
TRAF4-213ENST00000578917 NOLC1Q14978 699 aaKnown RBP eCLIP7.16□□□□□ -1.26
TRAF4-213ENST00000578917 KYAT1Q16773 422 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 USP41Q3LFD5 358 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 SEZ6Q53EL9 994 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 ZC2HC1CQ53FD0 456 aaPredicted RBP7.16□□□□□ -1.26
TRAF4-213ENST00000578917 GLRA4Q5JXX5 417 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 ADALQ6DHV7 355 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 SLFN12LQ6IEE8 588 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 CES5AQ6NT32 575 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 DCLRE1AQ6PJP8 1040 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 STXBP4Q6ZWJ1 553 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 TAS1R3Q7RTX0 852 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 PPFIBP1Q86W92 1011 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 TMEM173Q86WV6 379 aaPredicted RBP7.16□□□□□ -1.26
TRAF4-213ENST00000578917 SFR1Q86XK3 245 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 HASPINQ8TF76 798 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 RIN2Q8WYP3 895 aaPredicted RBP7.16□□□□□ -1.26
TRAF4-213ENST00000578917 DDX27Q96GQ7 796 aaKnown RBP7.16□□□□□ -1.26
TRAF4-213ENST00000578917 ACCSQ96QU6 501 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 APOL5Q9BWW9 433 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 SCAND2PQ9GZW5 306 aaPredicted RBP7.16□□□□□ -1.26
TRAF4-213ENST00000578917 CUEDC2Q9H467 287 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 SEL1LQ9UBV2 794 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 ADAM28Q9UKQ2 775 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 KCNH3Q9ULD8 1083 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 BARX2Q9UMQ3 279 aaPredicted RBP7.16□□□□□ -1.26
TRAF4-213ENST00000578917 NUB1Q9Y5A7 615 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 MORC2Q9Y6X9 1032 aaPredicted RBP7.16□□□□□ -1.26
TRAF4-213ENST00000578917 NCOR1O75376 2440 aa7.16□□□□□ -1.26
TRAF4-213ENST00000578917 A0A087X0B3 334 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 GRXCR2A6NFK2 248 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 TNFRSF10AO00220 468 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 PTGESO14684 152 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 FSCN2O14926 492 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 INPPL1O15357 1258 aa7.15□□□□□ -1.26
TRAF4-213ENST00000578917 B4GALT3O60512 393 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms