RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 ERVFC1P60507 584 aa15.84■□□□□ 0.13
MKS1-207ENST00000578789 MCL1Q07820 350 aa15.84■□□□□ 0.13
MKS1-207ENST00000578789 HYAL1Q12794 435 aa15.84■□□□□ 0.13
MKS1-207ENST00000578789 NOLC1Q14978 699 aaKnown RBP eCLIP15.84■□□□□ 0.13
MKS1-207ENST00000578789 CNNM4Q6P4Q7 775 aa15.84■□□□□ 0.13
MKS1-207ENST00000578789 DDX53Q86TM3 631 aaKnown RBP15.84■□□□□ 0.13
MKS1-207ENST00000578789 MAP4K3Q8IVH8 894 aa15.84■□□□□ 0.13
MKS1-207ENST00000578789 HLA-CQ95604 372 aa15.84■□□□□ 0.13
MKS1-207ENST00000578789 HVCN1Q96D96 273 aa15.84■□□□□ 0.13
MKS1-207ENST00000578789 PABPC5Q96DU9 382 aaKnown RBP15.84■□□□□ 0.13
MKS1-207ENST00000578789 PYM1Q9BRP8 204 aaKnown RBP15.84■□□□□ 0.13
MKS1-207ENST00000578789 CCDC94Q9BW85 323 aaPredicted RBP15.84■□□□□ 0.13
MKS1-207ENST00000578789 STRA6Q9BX79 667 aa15.84■□□□□ 0.13
MKS1-207ENST00000578789 SCAND2PQ9GZW5 306 aaPredicted RBP15.84■□□□□ 0.13
MKS1-207ENST00000578789 ZBP1Q9H171 429 aa15.84■□□□□ 0.13
MKS1-207ENST00000578789 NGRNQ9NPE2 291 aaKnown RBP15.84■□□□□ 0.13
MKS1-207ENST00000578789 OLFML3Q9NRN5 406 aa15.84■□□□□ 0.13
MKS1-207ENST00000578789 MARCH5Q9NX47 278 aa15.84■□□□□ 0.13
MKS1-207ENST00000578789 STK39Q9UEW8 545 aa15.84■□□□□ 0.13
MKS1-207ENST00000578789 GDAQ9Y2T3 454 aa15.84■□□□□ 0.13
MKS1-207ENST00000578789 PCDHGC5Q9Y5F6 944 aa15.84■□□□□ 0.13
MKS1-207ENST00000578789 PRUNE2Q8WUY3 3088 aa15.83■□□□□ 0.13
MKS1-207ENST00000578789 NRP1O14786 923 aa15.83■□□□□ 0.12
MKS1-207ENST00000578789 NAB2Q15742 525 aa15.83■□□□□ 0.12
MKS1-207ENST00000578789 CTC1Q2NKJ3 1217 aa15.83■□□□□ 0.12
MKS1-207ENST00000578789 XKR4Q5GH76 650 aa15.83■□□□□ 0.12
MKS1-207ENST00000578789 ADALQ6DHV7 355 aa15.83■□□□□ 0.12
MKS1-207ENST00000578789 ZNF720Q7Z2F6 126 aa15.83■□□□□ 0.12
MKS1-207ENST00000578789 ZBTB33Q86T24 672 aa15.83■□□□□ 0.12
MKS1-207ENST00000578789 ZBTB45Q96K62 511 aaPredicted RBP15.83■□□□□ 0.12
MKS1-207ENST00000578789 TCF25Q9BQ70 676 aa15.83■□□□□ 0.12
MKS1-207ENST00000578789 VN1R3Q9BXE9 311 aa15.83■□□□□ 0.12
MKS1-207ENST00000578789 TRIM9Q9C026 710 aa15.83■□□□□ 0.12
MKS1-207ENST00000578789 CXCL16Q9H2A7 254 aa15.83■□□□□ 0.12
MKS1-207ENST00000578789 UBE2ZQ9H832 354 aaPredicted RBP15.83■□□□□ 0.12
MKS1-207ENST00000578789 ANKFY1Q9P2R3 1169 aa15.83■□□□□ 0.12
MKS1-207ENST00000578789 KCNH3Q9ULD8 1083 aa15.83■□□□□ 0.12
MKS1-207ENST00000578789 FAN1Q9Y2M0 1017 aa15.83■□□□□ 0.12
MKS1-207ENST00000578789 HNRNPDLO14979 420 aaKnown RBP15.82■□□□□ 0.12
MKS1-207ENST00000578789 POLR2DO15514 142 aaKnown RBP15.82■□□□□ 0.12
MKS1-207ENST00000578789 CLDN3O15551 220 aa15.82■□□□□ 0.12
MKS1-207ENST00000578789 EFEMP2O95967 443 aa15.82■□□□□ 0.12
MKS1-207ENST00000578789 ALDH2P05091 517 aa15.82■□□□□ 0.12
MKS1-207ENST00000578789 CMA1P23946 247 aa15.82■□□□□ 0.12
MKS1-207ENST00000578789 LIG4P49917 911 aa15.82■□□□□ 0.12
MKS1-207ENST00000578789 MRPS5P82675 430 aaKnown RBP15.82■□□□□ 0.12
MKS1-207ENST00000578789 AMPD3Q01432 767 aa15.82■□□□□ 0.12
MKS1-207ENST00000578789 TUSC3Q13454 348 aa15.82■□□□□ 0.12
MKS1-207ENST00000578789 DUSP6Q16828 381 aa15.82■□□□□ 0.12
MKS1-207ENST00000578789 AAK1Q2M2I8 961 aa15.82■□□□□ 0.12
MKS1-207ENST00000578789 PLPP4Q5VZY2 271 aa15.82■□□□□ 0.12
MKS1-207ENST00000578789 ALKAL1Q6UXT8 129 aa15.82■□□□□ 0.12
MKS1-207ENST00000578789 RNF168Q8IYW5 571 aaPredicted RBP15.82■□□□□ 0.12
MKS1-207ENST00000578789 BICD1Q96G01 975 aa15.82■□□□□ 0.12
MKS1-207ENST00000578789 SNX27Q96L92 541 aa15.82■□□□□ 0.12
MKS1-207ENST00000578789 ASB2Q96Q27 587 aa15.82■□□□□ 0.12
MKS1-207ENST00000578789 PPP1R10Q96QC0 940 aaKnown RBP15.82■□□□□ 0.12
MKS1-207ENST00000578789 CDCA3Q99618 268 aaPredicted RBP15.82■□□□□ 0.12
MKS1-207ENST00000578789 TCHPQ9BT92 498 aa15.82■□□□□ 0.12
MKS1-207ENST00000578789 HAPLN2Q9GZV7 340 aa15.82■□□□□ 0.12
MKS1-207ENST00000578789 ENTPD7Q9NQZ7 604 aa15.82■□□□□ 0.12
MKS1-207ENST00000578789 TOPORSQ9NS56 1045 aaPredicted RBP15.82■□□□□ 0.12
MKS1-207ENST00000578789 HPSEQ9Y251 543 aa15.82■□□□□ 0.12
MKS1-207ENST00000578789 PRG3Q9Y2Y8 225 aaPredicted RBP15.82■□□□□ 0.12
MKS1-207ENST00000578789 FAM237AA0A1B0GTK4 181 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 FSD2A1L4K1 749 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 NR1I2O75469 434 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 THP07101 528 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 CTSAP10619 480 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 IDEP14735 1019 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 PFKFB1P16118 471 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 GTF2F1P35269 517 aaKnown RBP eCLIP15.81■□□□□ 0.12
MKS1-207ENST00000578789 OR1G1P47890 313 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 YARSP54577 528 aaKnown RBP15.81■□□□□ 0.12
MKS1-207ENST00000578789 TFF2Q03403 129 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 SMC1AQ14683 1233 aaKnown RBP15.81■□□□□ 0.12
MKS1-207ENST00000578789 ZC2HC1CQ53FD0 456 aaPredicted RBP15.81■□□□□ 0.12
MKS1-207ENST00000578789 HERC4Q5GLZ8 1057 aaPredicted RBP15.81■□□□□ 0.12
MKS1-207ENST00000578789 TJAP1Q5JTD0 557 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 SLC39A4Q6P5W5 647 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 TMC7Q7Z402 723 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 CCDC65Q8IXS2 484 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 VPS52Q8N1B4 723 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 EFHBQ8N7U6 833 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 MICAL1Q8TDZ2 1067 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 STAMQ92783 540 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 C7orf25Q9BPX7 421 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 HERC2P3Q9BVR0 1158 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 PANK4Q9NVE7 773 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 IRAK3Q9Y616 596 aa15.81■□□□□ 0.12
MKS1-207ENST00000578789 A0A1W2PQ27 194 aa15.8■□□□□ 0.12
MKS1-207ENST00000578789 A0A1W2PQ64 194 aa15.8■□□□□ 0.12
MKS1-207ENST00000578789 A0A1W2PQD8 194 aa15.8■□□□□ 0.12
MKS1-207ENST00000578789 C2orf71A6NGG8 1288 aa15.8■□□□□ 0.12
MKS1-207ENST00000578789 HIDE1A8MVS5 230 aa15.8■□□□□ 0.12
MKS1-207ENST00000578789 MEFVO15553 781 aaPredicted RBP15.8■□□□□ 0.12
MKS1-207ENST00000578789 FAM189A1O60320 539 aa15.8■□□□□ 0.12
MKS1-207ENST00000578789 HARSP12081 509 aaKnown RBP15.8■□□□□ 0.12
MKS1-207ENST00000578789 NRIP1P48552 1158 aa15.8■□□□□ 0.12
MKS1-207ENST00000578789 OSTNP61366 133 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms