RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 MNX1P50219 401 aaPredicted RBP14.59□□□□□ -0.07
SRSF1-202ENST00000578430 TRIM14Q14142 442 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 PSMD6Q15008 389 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 DCAF17Q5H9S7 520 aaPredicted RBP14.59□□□□□ -0.07
SRSF1-202ENST00000578430 TCERG1LQ5VWI1 586 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 EEF1DP3Q658K8 133 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 SLC27A1Q6PCB7 646 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 CRELD2Q6UXH1 353 aaPredicted RBP14.59□□□□□ -0.07
SRSF1-202ENST00000578430 SLC39A5Q6ZMH5 540 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 ANKRD33Q7Z3H0 272 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 CBWD2Q8IUF1 395 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 BRSK2Q8IWQ3 736 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 PARD3BQ8TEW8 1205 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 TMEM40Q8WWA1 233 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 WNT8BQ93098 351 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 TOX2Q96NM4 488 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 NUP58Q9BVL2 599 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 TRPV6Q9H1D0 765 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 CHST12Q9NRB3 414 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 RBAKQ9NYW8 714 aaPredicted RBP14.59□□□□□ -0.07
SRSF1-202ENST00000578430 USP20Q9Y2K6 914 aa14.59□□□□□ -0.07
SRSF1-202ENST00000578430 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.59□□□□□ -0.077e-17■■□□□ 12.1
SRSF1-202ENST00000578430 ADRB2P07550 413 aa14.58□□□□□ -0.08
SRSF1-202ENST00000578430 CKBP12277 381 aa14.58□□□□□ -0.08
SRSF1-202ENST00000578430 AP3M2P53677 418 aa14.58□□□□□ -0.08
SRSF1-202ENST00000578430 GSDMDP57764 484 aa14.58□□□□□ -0.08
SRSF1-202ENST00000578430 CLDN10P78369 228 aa14.58□□□□□ -0.08
SRSF1-202ENST00000578430 CETN1Q12798 172 aa14.58□□□□□ -0.08
SRSF1-202ENST00000578430 FBXO47Q5MNV8 452 aa14.58□□□□□ -0.08
SRSF1-202ENST00000578430 TMC6Q7Z403 805 aa14.58□□□□□ -0.08
SRSF1-202ENST00000578430 ZBTB33Q86T24 672 aa14.58□□□□□ -0.08
SRSF1-202ENST00000578430 FNBP1Q96RU3 617 aa14.58□□□□□ -0.08
SRSF1-202ENST00000578430 CPSF3Q9UKF6 684 aaKnown RBP14.58□□□□□ -0.08
SRSF1-202ENST00000578430 NOC2LQ9Y3T9 749 aaKnown RBP14.58□□□□□ -0.08
SRSF1-202ENST00000578430 DCDC2CA8MYV0 355 aa14.57□□□□□ -0.08
SRSF1-202ENST00000578430 IL18RAPO95256 599 aa14.57□□□□□ -0.08
SRSF1-202ENST00000578430 PARNO95453 639 aaKnown RBP14.57□□□□□ -0.08
SRSF1-202ENST00000578430 TPM1P09493 284 aa14.57□□□□□ -0.08
SRSF1-202ENST00000578430 CTSHP09668 335 aa14.57□□□□□ -0.08
SRSF1-202ENST00000578430 HARSP12081 509 aaKnown RBP14.57□□□□□ -0.08
SRSF1-202ENST00000578430 FGFR4P22455 802 aa14.57□□□□□ -0.08
SRSF1-202ENST00000578430 GRM5P41594 1212 aa14.57□□□□□ -0.08
SRSF1-202ENST00000578430 FMO5P49326 533 aa14.57□□□□□ -0.08
SRSF1-202ENST00000578430 ACOT2P49753 483 aa14.57□□□□□ -0.08
SRSF1-202ENST00000578430 FIGNQ5HY92 759 aa14.57□□□□□ -0.08
SRSF1-202ENST00000578430 ZNF618Q5T7W0 954 aa14.57□□□□□ -0.08
SRSF1-202ENST00000578430 GBP6Q6ZN66 633 aa14.57□□□□□ -0.08
SRSF1-202ENST00000578430 FAM228AQ86W67 206 aa14.57□□□□□ -0.08
SRSF1-202ENST00000578430 CD302Q8IX05 232 aa14.57□□□□□ -0.08
SRSF1-202ENST00000578430 ZSWIM2Q8NEG5 633 aa14.57□□□□□ -0.08
SRSF1-202ENST00000578430 CPB2Q96IY4 423 aa14.57□□□□□ -0.08
SRSF1-202ENST00000578430 PIN4Q9Y237 131 aaKnown RBP14.57□□□□□ -0.08
SRSF1-202ENST00000578430 DAAM1Q9Y4D1 1078 aa14.57□□□□□ -0.08
SRSF1-202ENST00000578430 PTMAP06454 111 aaKnown RBP14.56□□□□□ -0.08
SRSF1-202ENST00000578430 SELPP16109 830 aa14.56□□□□□ -0.08
SRSF1-202ENST00000578430 TBX2Q13207 712 aaPredicted RBP14.56□□□□□ -0.08
SRSF1-202ENST00000578430 SYCP1Q15431 976 aa14.56□□□□□ -0.08
SRSF1-202ENST00000578430 PPFIBP1Q86W92 1011 aa14.56□□□□□ -0.08
SRSF1-202ENST00000578430 SPC24Q8NBT2 197 aa14.56□□□□□ -0.08
SRSF1-202ENST00000578430 CGRRF1Q99675 332 aa14.56□□□□□ -0.08
SRSF1-202ENST00000578430 CCDC94Q9BW85 323 aaPredicted RBP14.56□□□□□ -0.08
SRSF1-202ENST00000578430 EDEM3Q9BZQ6 932 aa14.56□□□□□ -0.08
SRSF1-202ENST00000578430 C11orf49Q9H6J7 331 aa14.56□□□□□ -0.08
SRSF1-202ENST00000578430 RPF1Q9H9Y2 349 aaKnown RBP14.56□□□□□ -0.08
SRSF1-202ENST00000578430 PLEKHA5Q9HAU0 1116 aa14.56□□□□□ -0.08
SRSF1-202ENST00000578430 TMEM8AQ9HCN3 771 aa14.56□□□□□ -0.08
SRSF1-202ENST00000578430 ERVK-5Q9HDB9 667 aa14.56□□□□□ -0.08
SRSF1-202ENST00000578430 ST3GAL5Q9UNP4 418 aa14.56□□□□□ -0.08
SRSF1-202ENST00000578430 SIK3Q9Y2K2 1263 aa14.56□□□□□ -0.08
SRSF1-202ENST00000578430 LRRIQ3A6PVS8 624 aaPredicted RBP14.55□□□□□ -0.08
SRSF1-202ENST00000578430 TRIM49P0CI25 452 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 TRIM49CP0CI26 452 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 STAG3L1P0CL83 205 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 MXI1P50539 228 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 MYL7Q01449 175 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 PAK2Q13177 524 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 LPIN1Q14693 890 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 EXOC3L4Q17RC7 722 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 C1orf220Q5T0J3 134 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 KRT39Q6A163 491 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 LRRC8DQ7L1W4 858 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 NECAB2Q7Z6G3 386 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 WDR49Q8IV35 697 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 THNSL1Q8IYQ7 743 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 HACE1Q8IYU2 909 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 PLEKHO2Q8TD55 490 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 CCDC127Q96BQ5 260 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 PCMTD1Q96MG8 357 aaPredicted RBP14.55□□□□□ -0.08
SRSF1-202ENST00000578430 ACAP3Q96P50 834 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 TSPAN18Q96SJ8 248 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 TRAIPQ9BWF2 469 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 TRIM6Q9C030 488 aaPredicted RBP14.55□□□□□ -0.08
SRSF1-202ENST00000578430 ASB7Q9H672 318 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 PLCB1Q9NQ66 1216 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 DNAH12Q6ZR08 3092 aa14.55□□□□□ -0.08
SRSF1-202ENST00000578430 PQBP1O60828 265 aaKnown RBP14.54□□□□□ -0.08
SRSF1-202ENST00000578430 NPTXRO95502 500 aa14.54□□□□□ -0.08
SRSF1-202ENST00000578430 DLATP10515 647 aaKnown RBP14.54□□□□□ -0.08
SRSF1-202ENST00000578430 GHRP10912 638 aa14.54□□□□□ -0.08
SRSF1-202ENST00000578430 SKIP12755 728 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms