RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	HASPIN	Q8TF76	798 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	FGF14	Q92915	247 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	PPP2R3C	Q969Q6	453 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	ZBTB45	Q96K62	511 aa	Predicted RBP	4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	MFSD14A	Q96MC6	490 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	SCLT1	Q96NL6	688 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	APOL6	Q9BWW8	343 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	PLA2G2F	Q9BZM2	168 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	INO80B	Q9C086	356 aa	Predicted RBP	4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	IKZF4	Q9H2S9	585 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	SFXN1	Q9H9B4	322 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	GOLGA2P5	Q9HBQ8	144 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	WDR6	Q9NNW5	1121 aa	Known RBP	4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	TSHZ2	Q9NRE2	1034 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	DZANK1	Q9NVP4	752 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	HCFC1R1	Q9NWW0	138 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	PPP4R2	Q9NY27	417 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	SNTG2	Q9NY99	539 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	EPS15L1	Q9UBC2	864 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	FBXW11	Q9UKB1	542 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	FAN1	Q9Y2M0	1017 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	GIT1	Q9Y2X7	761 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	MTF2	Q9Y483	593 aa	Predicted RBP	4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	F5	P12259	2224 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	DNAH14	Q0VDD8	3507 aa		4.94	□□□□□ -1.62
PPP4R1-209	ENST00000578329	ZMYM2	Q9UBW7	1377 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	PRR23A	A6NEV1	266 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	CASTOR2	A6NHX0	329 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329		E9PMD0	336 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	GAS2	O43903	313 aa	Known RBP	4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	ZMYND10	O75800	440 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	CDKL5	O76039	1030 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	SEC24A	O95486	1093 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	ALDH2	P05091	517 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	SKI	P12755	728 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	AOC1	P19801	751 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	ATP2B1	P20020	1258 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	FGFR3	P22607	806 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	FCAR	P24071	287 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	KLRC2	P26717	231 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	AXL	P30530	894 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	NBL1	P41271	181 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	CCR2	P41597	374 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	BRCC3	P46736	316 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	OR1G1	P47890	313 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	GLUD2	P49448	558 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	FXR2	P51116	673 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	RNASEL	Q05823	741 aa	Known RBP	4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	MTMR3	Q13615	1198 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	MRPL58	Q14197	206 aa	Known RBP	4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	HSP90AA2P	Q14568	343 aa	Predicted RBP	4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	MXD4	Q14582	209 aa	Predicted RBP	4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	TPRN	Q4KMQ1	711 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	ARSH	Q5FYA8	562 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	GLRA4	Q5JXX5	417 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	ATAT1	Q5SQI0	421 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	ZBTB41	Q5SVQ8	909 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	ASTL	Q6HA08	431 aa	Predicted RBP	4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	SLC39A4	Q6P5W5	647 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	NOTUM	Q6P988	496 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	SLC27A1	Q6PCB7	646 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	PARM1	Q6UWI2	310 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	C1orf186	Q6ZWK4	172 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	CABP7	Q86V35	215 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	GLYCTK	Q8IVS8	523 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	GPR65	Q8IYL9	337 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	UBALD2	Q8IYN6	164 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	ITFG1	Q8TB96	612 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	TCP11	Q8WWU5	503 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	PIK3R5	Q8WYR1	880 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	C18orf25	Q96B23	403 aa	Predicted RBP	4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	PGBD4	Q96DM1	585 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	RSPRY1	Q96DX4	576 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	CCDC51	Q96ER9	411 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	DDX27	Q96GQ7	796 aa	Known RBP	4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	NECTIN4	Q96NY8	510 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	FIZ1	Q96SL8	496 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	PRKD2	Q9BZL6	878 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	CDT1	Q9H211	546 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	CRISPLD1	Q9H336	500 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	TUFT1	Q9NNX1	390 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	FNIP2	Q9P278	1114 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	ARHGAP28	Q9P2N2	729 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	ADAM28	Q9UKQ2	775 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	DUSP12	Q9UNI6	340 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	CLUH	O75153	1309 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	PATJ	Q8NI35	1801 aa		4.93	□□□□□ -1.62
PPP4R1-209	ENST00000578329	ANK1	P16157	1881 aa		4.92	□□□□□ -1.62
PPP4R1-209	ENST00000578329	SPTBN2	O15020	2390 aa		4.92	□□□□□ -1.62
PPP4R1-209	ENST00000578329	NPHP3-ACAD11	A0A0J9YXS1	232 aa		4.92	□□□□□ -1.62
PPP4R1-209	ENST00000578329	SMIM28	A0A1B0GU29	152 aa		4.92	□□□□□ -1.62
PPP4R1-209	ENST00000578329	FSD2	A1L4K1	749 aa		4.92	□□□□□ -1.62
PPP4R1-209	ENST00000578329	LRRIQ4	A6NIV6	560 aa		4.92	□□□□□ -1.62
PPP4R1-209	ENST00000578329	SFI1	A8K8P3	1242 aa		4.92	□□□□□ -1.62
PPP4R1-209	ENST00000578329	TMEM189-UBE2V1	I3L0A0	370 aa		4.92	□□□□□ -1.62
PPP4R1-209	ENST00000578329	ACKR2	O00590	384 aa		4.92	□□□□□ -1.62
PPP4R1-209	ENST00000578329	PPEF2	O14830	753 aa		4.92	□□□□□ -1.62
PPP4R1-209	ENST00000578329	PRKCB	P05771	671 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms