RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 PRMT7Q9NVM4 692 aaPredicted RBP13.9□□□□□ -0.18
SMARCD2-207ENST00000578234 PARP2Q9UGN5 583 aa13.9□□□□□ -0.18
SMARCD2-207ENST00000578234 ADAM28Q9UKQ2 775 aa13.9□□□□□ -0.18
SMARCD2-207ENST00000578234 DUSP12Q9UNI6 340 aa13.9□□□□□ -0.18
SMARCD2-207ENST00000578234 PLXNA3P51805 1871 aa13.9□□□□□ -0.18
SMARCD2-207ENST00000578234 TGM5O43548 720 aa13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 N4BP1O75113 896 aaKnown RBP13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 RFPL2O75678 378 aa13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 LIG1P18858 919 aa13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 ATP2B1P20020 1258 aa13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 MCM7P33993 719 aa13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 MCM2P49736 904 aa13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 CREMQ03060 361 aa13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 SAFBQ15424 915 aaKnown RBP eCLIP13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 CDCA2Q69YH5 1023 aaPredicted RBP13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 MAEAQ7L5Y9 396 aa13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 ASCL5Q7RTU5 278 aa13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 SMG7Q92540 1137 aaKnown RBP13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 RABGGTAQ92696 567 aa13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 NKD2Q969F2 451 aaPredicted RBP13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 NXPE3Q969Y0 559 aa13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 ZNF707Q96C28 371 aaPredicted RBP13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 B3GALT6Q96L58 329 aa13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 NT5C3AQ9H0P0 336 aa13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 ZDHHC7Q9NXF8 308 aa13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 KLK14Q9P0G3 267 aa13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 EPS15L1Q9UBC2 864 aa13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 DAXXQ9UER7 740 aaPredicted RBP13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 CA14Q9ULX7 337 aa13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 CLUHO75153 1309 aa13.89□□□□□ -0.19
SMARCD2-207ENST00000578234 VPS13AQ96RL7 3174 aa13.88□□□□□ -0.19
SMARCD2-207ENST00000578234 PI15O43692 258 aa13.88□□□□□ -0.19
SMARCD2-207ENST00000578234 MED24O75448 989 aa13.88□□□□□ -0.19
SMARCD2-207ENST00000578234 TADA2AO75478 443 aa13.88□□□□□ -0.19
SMARCD2-207ENST00000578234 NPR3P17342 541 aa13.88□□□□□ -0.19
SMARCD2-207ENST00000578234 AOC1P19801 751 aa13.88□□□□□ -0.19
SMARCD2-207ENST00000578234 RPA1P27694 616 aa13.88□□□□□ -0.19
SMARCD2-207ENST00000578234 ORC2Q13416 577 aaPredicted RBP13.88□□□□□ -0.19
SMARCD2-207ENST00000578234 HSP90AA2PQ14568 343 aaPredicted RBP13.88□□□□□ -0.19
SMARCD2-207ENST00000578234 SPECC1Q5M775 1068 aa13.88□□□□□ -0.19
SMARCD2-207ENST00000578234 ZBTB8OSQ8IWT0 167 aa13.88□□□□□ -0.19
SMARCD2-207ENST00000578234 RSAD2Q8WXG1 361 aa13.88□□□□□ -0.19
SMARCD2-207ENST00000578234 RIN2Q8WYP3 895 aaPredicted RBP13.88□□□□□ -0.19
SMARCD2-207ENST00000578234 C2orf40Q9H1Z8 148 aa13.88□□□□□ -0.19
SMARCD2-207ENST00000578234 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.88□□□□□ -0.19
SMARCD2-207ENST00000578234 WNT16Q9UBV4 365 aa13.88□□□□□ -0.19
SMARCD2-207ENST00000578234 SF3B1O75533 1304 aaKnown RBP eCLIP13.88□□□□□ -0.19
SMARCD2-207ENST00000578234 RIF1Q5UIP0 2472 aaKnown RBP13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 MYO15AQ9UKN7 3530 aa13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 N4BP3O15049 544 aa13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 NARSO43776 548 aaKnown RBP13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 CYP11B2P19099 503 aa13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 MUTP22033 750 aa13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 NBL1P41271 181 aa13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 NAMPTP43490 491 aa13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 GUCY1B3Q02153 619 aa13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 TUSC3Q13454 348 aa13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 PRPF4BQ13523 1007 aaKnown RBP13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 MAPK6Q16659 721 aa13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 CWF19L1Q69YN2 538 aaKnown RBP13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 PADI6Q6TGC4 694 aa13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 SLC44A3Q8N4M1 653 aa13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 FAM184AQ8NB25 1140 aa13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 ERMNQ8TAM6 284 aa13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 SNX27Q96L92 541 aa13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 HINFPQ9BQA5 517 aa13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 RTP3Q9BQQ7 232 aa13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 PAAF1Q9BRP4 392 aa13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 LLPHQ9BRT6 129 aaKnown RBP13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 PRKD2Q9BZL6 878 aa13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 PDZD7Q9H5P4 517 aa13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 DOCK8Q8NF50 2099 aa13.87□□□□□ -0.19
SMARCD2-207ENST00000578234 TTLL13PA6NNM8 815 aa13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 ACKR2O00590 384 aa13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 PTGESO14684 152 aa13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 ZMYND10O75800 440 aa13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 THP07101 528 aa13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 OR52Z1P0C646 297 aa13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 RPL17P18621 184 aaKnown RBP13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 PPP2R5AQ15172 486 aa13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 RTP2Q5QGT7 225 aa13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 POTEGQ6S5H5 508 aa13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 GET4Q7L5D6 327 aaPredicted RBP13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 CEP57Q86XR8 500 aa13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 ADSSL1Q8N142 457 aa13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 PIK3R5Q8WYR1 880 aa13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 BSNDQ8WZ55 320 aa13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 MYADMQ96S97 322 aa13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 ADPGKQ9BRR6 497 aa13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 CCDC113Q9H0I3 377 aa13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 FOXP1Q9H334 677 aaPredicted RBP13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 FOXD4L1Q9NU39 408 aa13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 SNTG2Q9NY99 539 aa13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 POLIQ9UNA4 740 aa13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 FAM186AA6NE01 2351 aa13.86□□□□□ -0.19
SMARCD2-207ENST00000578234 DOCK6Q96HP0 2047 aa13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 ARHGEF35A5YM69 484 aa13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 PRR23AA6NEV1 266 aa13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 PRKCBP05771 671 aa13.85□□□□□ -0.19
SMARCD2-207ENST00000578234 SRFP11831 508 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms