RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 GPR65Q8IYL9 337 aa18.37■□□□□ 0.53
CDK5RAP3-206ENST00000578018 DEPTORQ8TB45 409 aa18.37■□□□□ 0.53
CDK5RAP3-206ENST00000578018 PAAF1Q9BRP4 392 aa18.37■□□□□ 0.53
CDK5RAP3-206ENST00000578018 KIFC3Q9BVG8 833 aa18.37■□□□□ 0.53
CDK5RAP3-206ENST00000578018 RHOBTB2Q9BYZ6 727 aa18.37■□□□□ 0.53
CDK5RAP3-206ENST00000578018 BHMT2Q9H2M3 363 aa18.37■□□□□ 0.53
CDK5RAP3-206ENST00000578018 LRWD1Q9UFC0 647 aa18.37■□□□□ 0.53
CDK5RAP3-206ENST00000578018 USP20Q9Y2K6 914 aa18.37■□□□□ 0.53
CDK5RAP3-206ENST00000578018 VWA8A3KMH1 1905 aa18.37■□□□□ 0.53
CDK5RAP3-206ENST00000578018 RECQL4O94761 1208 aa18.36■□□□□ 0.53
CDK5RAP3-206ENST00000578018 AVPR2P30518 371 aa18.36■□□□□ 0.53
CDK5RAP3-206ENST00000578018 TCF15Q12870 199 aa18.36■□□□□ 0.53
CDK5RAP3-206ENST00000578018 TMEM132AQ24JP5 1023 aa18.36■□□□□ 0.53
CDK5RAP3-206ENST00000578018 USP41Q3LFD5 358 aa18.36■□□□□ 0.53
CDK5RAP3-206ENST00000578018 EEF1DP3Q658K8 133 aa18.36■□□□□ 0.53
CDK5RAP3-206ENST00000578018 ELMSAN1Q6PJG2 1045 aa18.36■□□□□ 0.53
CDK5RAP3-206ENST00000578018 IGSF22Q8N9C0 903 aa18.36■□□□□ 0.53
CDK5RAP3-206ENST00000578018 ACSF2Q96CM8 615 aaPredicted RBP18.36■□□□□ 0.53
CDK5RAP3-206ENST00000578018 ADPGKQ9BRR6 497 aa18.36■□□□□ 0.53
CDK5RAP3-206ENST00000578018 CXCL16Q9H2A7 254 aa18.36■□□□□ 0.53
CDK5RAP3-206ENST00000578018 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.36■□□□□ 0.53
CDK5RAP3-206ENST00000578018 SNTG2Q9NY99 539 aa18.36■□□□□ 0.53
CDK5RAP3-206ENST00000578018 DPP7Q9UHL4 492 aa18.36■□□□□ 0.53
CDK5RAP3-206ENST00000578018 PCDHB6Q9Y5E3 794 aa18.36■□□□□ 0.53
CDK5RAP3-206ENST00000578018 SF3B1O75533 1304 aaKnown RBP eCLIP18.35■□□□□ 0.53
CDK5RAP3-206ENST00000578018 CASTOR2A6NHX0 329 aa18.35■□□□□ 0.53
CDK5RAP3-206ENST00000578018 RFPL2O75678 378 aa18.35■□□□□ 0.53
CDK5RAP3-206ENST00000578018 PAPLNO95428 1278 aa18.35■□□□□ 0.53
CDK5RAP3-206ENST00000578018 C1RP00736 705 aa18.35■□□□□ 0.53
CDK5RAP3-206ENST00000578018 LIG1P18858 919 aa18.35■□□□□ 0.53
CDK5RAP3-206ENST00000578018 PTGDRQ13258 359 aa18.35■□□□□ 0.53
CDK5RAP3-206ENST00000578018 NAB2Q15742 525 aa18.35■□□□□ 0.53
CDK5RAP3-206ENST00000578018 CYP26C1Q6V0L0 522 aa18.35■□□□□ 0.53
CDK5RAP3-206ENST00000578018 SNX29Q8TEQ0 813 aa18.35■□□□□ 0.53
CDK5RAP3-206ENST00000578018 HDAC7Q8WUI4 952 aa18.35■□□□□ 0.53
CDK5RAP3-206ENST00000578018 RIN2Q8WYP3 895 aaPredicted RBP18.35■□□□□ 0.53
CDK5RAP3-206ENST00000578018 KIFAP3Q92845 792 aa18.35■□□□□ 0.53
CDK5RAP3-206ENST00000578018 POLD4Q9HCU8 107 aa18.35■□□□□ 0.53
CDK5RAP3-206ENST00000578018 DDX19AQ9NUU7 478 aaKnown RBP18.35■□□□□ 0.53
CDK5RAP3-206ENST00000578018 FNIP2Q9P278 1114 aa18.35■□□□□ 0.53
CDK5RAP3-206ENST00000578018 KIAA1024Q9UPX6 916 aa18.35■□□□□ 0.53
CDK5RAP3-206ENST00000578018 DOCK6Q96HP0 2047 aa18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 CLUHO75153 1309 aa18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 CCDC195A0A1B0GUA6 201 aa18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 TGM5O43548 720 aa18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 N4BP1O75113 896 aaKnown RBP18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 TADA2AO75478 443 aa18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 KIF4AO95239 1232 aa18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 SPATA31D3P0C874 917 aa18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 MYBP10242 640 aa18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 RPL17P18621 184 aaKnown RBP18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 EFNA5P52803 228 aa18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 CREMQ03060 361 aa18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 PDIA5Q14554 519 aa18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 DCAF4L1Q3SXM0 396 aa18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 RTP2Q5QGT7 225 aa18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 SPATA31D4Q6ZUB0 917 aa18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 PALB2Q86YC2 1186 aa18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 HASPINQ8TF76 798 aa18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 ZNF707Q96C28 371 aaPredicted RBP18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 IFT74Q96LB3 600 aa18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 PHOX2BQ99453 314 aa18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 RAB34Q9BZG1 259 aa18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 WDR6Q9NNW5 1121 aaKnown RBP18.34■□□□□ 0.53
CDK5RAP3-206ENST00000578018 THP07101 528 aa18.33■□□□□ 0.52
CDK5RAP3-206ENST00000578018 LILRA6Q6PI73 481 aa18.33■□□□□ 0.52
CDK5RAP3-206ENST00000578018 GLYCTKQ8IVS8 523 aa18.33■□□□□ 0.52
CDK5RAP3-206ENST00000578018 SMG7Q92540 1137 aaKnown RBP18.33■□□□□ 0.52
CDK5RAP3-206ENST00000578018 PLEKHA4Q9H4M7 779 aa18.33■□□□□ 0.52
CDK5RAP3-206ENST00000578018 STK24Q9Y6E0 443 aa18.33■□□□□ 0.52
CDK5RAP3-206ENST00000578018 PP2D1A8MPX8 630 aa18.32■□□□□ 0.52
CDK5RAP3-206ENST00000578018 LAD1O00515 517 aa18.32■□□□□ 0.52
CDK5RAP3-206ENST00000578018 PRPHP41219 470 aa18.32■□□□□ 0.52
CDK5RAP3-206ENST00000578018 RABEP1Q15276 862 aa18.32■□□□□ 0.52
CDK5RAP3-206ENST00000578018 IL17AQ16552 155 aa18.32■□□□□ 0.52
CDK5RAP3-206ENST00000578018 NT5DC1Q5TFE4 455 aa18.32■□□□□ 0.52
CDK5RAP3-206ENST00000578018 ATF7IP2Q5U623 682 aa18.32■□□□□ 0.52
CDK5RAP3-206ENST00000578018 PRSS55Q6UWB4 352 aaPredicted RBP18.32■□□□□ 0.52
CDK5RAP3-206ENST00000578018 DAW1Q8N136 415 aa18.32■□□□□ 0.52
CDK5RAP3-206ENST00000578018 TTPALQ9BTX7 342 aa18.32■□□□□ 0.52
CDK5RAP3-206ENST00000578018 KCNK12Q9HB15 430 aa18.32■□□□□ 0.52
CDK5RAP3-206ENST00000578018 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.32■□□□□ 0.52
CDK5RAP3-206ENST00000578018 ZDHHC7Q9NXF8 308 aa18.32■□□□□ 0.52
CDK5RAP3-206ENST00000578018 GDAQ9Y2T3 454 aa18.32■□□□□ 0.52
CDK5RAP3-206ENST00000578018 ZFHX2Q9C0A1 2572 aaPredicted RBP18.32■□□□□ 0.52
CDK5RAP3-206ENST00000578018 MYH11P35749 1972 aa18.31■□□□□ 0.52
CDK5RAP3-206ENST00000578018 USP34Q70CQ2 3546 aa18.31■□□□□ 0.52
CDK5RAP3-206ENST00000578018 PHLPP2Q6ZVD8 1323 aa18.31■□□□□ 0.52
CDK5RAP3-206ENST00000578018 E9PMD0 336 aa18.31■□□□□ 0.52
CDK5RAP3-206ENST00000578018 NUBP1P53384 320 aa18.31■□□□□ 0.52
CDK5RAP3-206ENST00000578018 TDGQ13569 410 aa18.31■□□□□ 0.52
CDK5RAP3-206ENST00000578018 FAM171A1Q5VUB5 890 aa18.31■□□□□ 0.52
CDK5RAP3-206ENST00000578018 TMEM105Q8N8V8 129 aa18.31■□□□□ 0.52
CDK5RAP3-206ENST00000578018 PIK3R5Q8WYR1 880 aa18.31■□□□□ 0.52
CDK5RAP3-206ENST00000578018 STAMQ92783 540 aa18.31■□□□□ 0.52
CDK5RAP3-206ENST00000578018 MMTAG2Q9BU76 263 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP3-206ENST00000578018 NT5C3AQ9H0P0 336 aa18.31■□□□□ 0.52
CDK5RAP3-206ENST00000578018 DAXXQ9UER7 740 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP3-206ENST00000578018 FBXW11Q9UKB1 542 aa18.31■□□□□ 0.52
CDK5RAP3-206ENST00000578018 DUSP12Q9UNI6 340 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms