RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 GTF2BQ00403 316 aa24.31■■□□□ 1.48
SMARCD2-206ENST00000577990 AMPD3Q01432 767 aa24.31■■□□□ 1.48
SMARCD2-206ENST00000577990 KRT17Q04695 432 aa24.31■■□□□ 1.48
SMARCD2-206ENST00000577990 TCEAL5Q5H9L2 206 aa24.31■■□□□ 1.48
SMARCD2-206ENST00000577990 ZBTB33Q86T24 672 aa24.31■■□□□ 1.48
SMARCD2-206ENST00000577990 GSTCDQ8NEC7 633 aa24.31■■□□□ 1.48
SMARCD2-206ENST00000577990 BICD1Q96G01 975 aa24.31■■□□□ 1.48
SMARCD2-206ENST00000577990 ST6GALNAC4Q9H4F1 302 aa24.31■■□□□ 1.48
SMARCD2-206ENST00000577990 ANKFY1Q9P2R3 1169 aa24.31■■□□□ 1.48
SMARCD2-206ENST00000577990 PUF60Q9UHX1 559 aaKnown RBP24.31■■□□□ 1.48
SMARCD2-206ENST00000577990 KCNH3Q9ULD8 1083 aa24.31■■□□□ 1.48
SMARCD2-206ENST00000577990 GDAQ9Y2T3 454 aa24.31■■□□□ 1.48
SMARCD2-206ENST00000577990 KCNA5P22460 613 aa24.3■■□□□ 1.48
SMARCD2-206ENST00000577990 GRM5P41594 1212 aa24.3■■□□□ 1.48
SMARCD2-206ENST00000577990 GRIK3Q13003 919 aa24.3■■□□□ 1.48
SMARCD2-206ENST00000577990 TMEM169Q96HH4 297 aa24.3■■□□□ 1.48
SMARCD2-206ENST00000577990 ZBTB45Q96K62 511 aaPredicted RBP24.3■■□□□ 1.48
SMARCD2-206ENST00000577990 TLR9Q9NR96 1032 aa24.3■■□□□ 1.48
SMARCD2-206ENST00000577990 HARSP12081 509 aaKnown RBP24.29■■□□□ 1.48
SMARCD2-206ENST00000577990 PFKFB1P16118 471 aa24.29■■□□□ 1.48
SMARCD2-206ENST00000577990 IRS1P35568 1242 aa24.29■■□□□ 1.48
SMARCD2-206ENST00000577990 ANP32AP39687 249 aaKnown RBP24.29■■□□□ 1.48
SMARCD2-206ENST00000577990 DSC1Q08554 894 aa24.29■■□□□ 1.48
SMARCD2-206ENST00000577990 NOLC1Q14978 699 aaKnown RBP eCLIP24.29■■□□□ 1.48
SMARCD2-206ENST00000577990 HERC4Q5GLZ8 1057 aaPredicted RBP24.29■■□□□ 1.48
SMARCD2-206ENST00000577990 TMEM173Q86WV6 379 aaPredicted RBP24.29■■□□□ 1.48
SMARCD2-206ENST00000577990 MAP4K3Q8IVH8 894 aa24.29■■□□□ 1.48
SMARCD2-206ENST00000577990 COLGALT2Q8IYK4 626 aa24.29■■□□□ 1.48
SMARCD2-206ENST00000577990 CEP120Q8N960 986 aa24.29■■□□□ 1.48
SMARCD2-206ENST00000577990 IGSF21Q96ID5 467 aa24.29■■□□□ 1.48
SMARCD2-206ENST00000577990 CCDC94Q9BW85 323 aaPredicted RBP24.29■■□□□ 1.48
SMARCD2-206ENST00000577990 TRIM9Q9C026 710 aa24.29■■□□□ 1.48
SMARCD2-206ENST00000577990 MRPL44Q9H9J2 332 aaKnown RBP24.29■■□□□ 1.48
SMARCD2-206ENST00000577990 PANK4Q9NVE7 773 aa24.29■■□□□ 1.48
SMARCD2-206ENST00000577990 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.28■■□□□ 1.48
SMARCD2-206ENST00000577990 HNRNPDLO14979 420 aaKnown RBP24.28■■□□□ 1.48
SMARCD2-206ENST00000577990 PIGRP01833 764 aa24.28■■□□□ 1.48
SMARCD2-206ENST00000577990 ALDH2P05091 517 aa24.28■■□□□ 1.48
SMARCD2-206ENST00000577990 LIG4P49917 911 aa24.28■■□□□ 1.48
SMARCD2-206ENST00000577990 ZC2HC1CQ53FD0 456 aaPredicted RBP24.28■■□□□ 1.48
SMARCD2-206ENST00000577990 ZNF720Q7Z2F6 126 aa24.28■■□□□ 1.48
SMARCD2-206ENST00000577990 CCDC65Q8IXS2 484 aa24.28■■□□□ 1.48
SMARCD2-206ENST00000577990 HVCN1Q96D96 273 aa24.28■■□□□ 1.48
SMARCD2-206ENST00000577990 GDPD2Q9HCC8 539 aa24.28■■□□□ 1.48
SMARCD2-206ENST00000577990 OLFML3Q9NRN5 406 aa24.28■■□□□ 1.48
SMARCD2-206ENST00000577990 TBC1D7Q9P0N9 293 aa24.28■■□□□ 1.48
SMARCD2-206ENST00000577990 FAN1Q9Y2M0 1017 aa24.28■■□□□ 1.48
SMARCD2-206ENST00000577990 C5orf42Q9H799 3197 aa24.28■■□□□ 1.48
SMARCD2-206ENST00000577990 A0A1B0GVL5 298 aa24.27■■□□□ 1.48
SMARCD2-206ENST00000577990 PTGESO14684 152 aa24.27■■□□□ 1.48
SMARCD2-206ENST00000577990 CLDN3O15551 220 aa24.27■■□□□ 1.48
SMARCD2-206ENST00000577990 MATR3P43243 847 aaKnown RBP eCLIP24.27■■□□□ 1.48
SMARCD2-206ENST00000577990 YARSP54577 528 aaKnown RBP24.27■■□□□ 1.48
SMARCD2-206ENST00000577990 OSTNP61366 133 aa24.27■■□□□ 1.48
SMARCD2-206ENST00000577990 ASIC1P78348 528 aa24.27■■□□□ 1.48
SMARCD2-206ENST00000577990 MCL1Q07820 350 aa24.27■■□□□ 1.48
SMARCD2-206ENST00000577990 PDE12Q6L8Q7 609 aaKnown RBP24.27■■□□□ 1.48
SMARCD2-206ENST00000577990 CNNM4Q6P4Q7 775 aa24.27■■□□□ 1.48
SMARCD2-206ENST00000577990 EP400NLQ6ZTU2 488 aa24.27■■□□□ 1.48
SMARCD2-206ENST00000577990 CEP57L1Q8IYX8 460 aa24.27■■□□□ 1.48
SMARCD2-206ENST00000577990 MICAL1Q8TDZ2 1067 aa24.27■■□□□ 1.48
SMARCD2-206ENST00000577990 BCL7CQ8WUZ0 217 aaPredicted RBP24.27■■□□□ 1.48
SMARCD2-206ENST00000577990 CIZ1Q9ULV3 898 aaPredicted RBP24.27■■□□□ 1.48
SMARCD2-206ENST00000577990 HPSEQ9Y251 543 aa24.27■■□□□ 1.48
SMARCD2-206ENST00000577990 A0A1W2PQ27 194 aa24.26■■□□□ 1.47
SMARCD2-206ENST00000577990 A0A1W2PQ64 194 aa24.26■■□□□ 1.47
SMARCD2-206ENST00000577990 A0A1W2PQD8 194 aa24.26■■□□□ 1.47
SMARCD2-206ENST00000577990 NRP1O14786 923 aa24.26■■□□□ 1.47
SMARCD2-206ENST00000577990 FSCN2O14926 492 aa24.26■■□□□ 1.47
SMARCD2-206ENST00000577990 PPP1R37O75864 691 aa24.26■■□□□ 1.47
SMARCD2-206ENST00000577990 OR1G1P47890 313 aa24.26■■□□□ 1.47
SMARCD2-206ENST00000577990 ERVFC1P60507 584 aa24.26■■□□□ 1.47
SMARCD2-206ENST00000577990 COASYQ13057 564 aa24.26■■□□□ 1.47
SMARCD2-206ENST00000577990 PPP2R3CQ969Q6 453 aa24.26■■□□□ 1.47
SMARCD2-206ENST00000577990 C7orf25Q9BPX7 421 aa24.26■■□□□ 1.47
SMARCD2-206ENST00000577990 STRA6Q9BX79 667 aa24.26■■□□□ 1.47
SMARCD2-206ENST00000577990 CXCL16Q9H2A7 254 aa24.26■■□□□ 1.47
SMARCD2-206ENST00000577990 ENTPD7Q9NQZ7 604 aa24.26■■□□□ 1.47
SMARCD2-206ENST00000577990 TOPORSQ9NS56 1045 aaPredicted RBP24.26■■□□□ 1.47
SMARCD2-206ENST00000577990 SERTAD1Q9UHV2 236 aa24.26■■□□□ 1.47
SMARCD2-206ENST00000577990 PRG3Q9Y2Y8 225 aaPredicted RBP24.26■■□□□ 1.47
SMARCD2-206ENST00000577990 PCDHGC5Q9Y5F6 944 aa24.26■■□□□ 1.47
SMARCD2-206ENST00000577990 FAM237AA0A1B0GTK4 181 aa24.25■■□□□ 1.47
SMARCD2-206ENST00000577990 H3BQ06 376 aaPredicted RBP24.25■■□□□ 1.47
SMARCD2-206ENST00000577990 ACTN4O43707 911 aaKnown RBP24.25■■□□□ 1.47
SMARCD2-206ENST00000577990 NR1I2O75469 434 aa24.25■■□□□ 1.47
SMARCD2-206ENST00000577990 GCNT3O95395 438 aa24.25■■□□□ 1.47
SMARCD2-206ENST00000577990 THP07101 528 aa24.25■■□□□ 1.47
SMARCD2-206ENST00000577990 SLFN14P0C7P3 912 aa24.25■■□□□ 1.47
SMARCD2-206ENST00000577990 DDX53Q86TM3 631 aaKnown RBP24.25■■□□□ 1.47
SMARCD2-206ENST00000577990 ACAP3Q96P50 834 aa24.25■■□□□ 1.47
SMARCD2-206ENST00000577990 TCF25Q9BQ70 676 aa24.25■■□□□ 1.47
SMARCD2-206ENST00000577990 HAPLN2Q9GZV7 340 aa24.25■■□□□ 1.47
SMARCD2-206ENST00000577990 MARCH5Q9NX47 278 aa24.25■■□□□ 1.47
SMARCD2-206ENST00000577990 USP25Q9UHP3 1055 aa24.25■■□□□ 1.47
SMARCD2-206ENST00000577990 TRIP11Q15643 1979 aa24.25■■□□□ 1.47
SMARCD2-206ENST00000577990 CITO14578 2027 aa24.25■■□□□ 1.47
SMARCD2-206ENST00000577990 TUSC3Q13454 348 aa24.24■■□□□ 1.47
SMARCD2-206ENST00000577990 ALCAMQ13740 583 aa24.24■■□□□ 1.47
SMARCD2-206ENST00000577990 LEXMQ3ZCV2 418 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms