RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 POMGNT1Q8WZA1 660 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 TGS1Q96RS0 853 aaKnown RBP13.51□□□□□ -0.25
RARA-208ENST00000577646 GAS2L1Q99501 681 aaPredicted RBP13.51□□□□□ -0.25
RARA-208ENST00000577646 MSTO1Q9BUK6 570 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 COL25A1Q9BXS0 654 aaPredicted RBP13.51□□□□□ -0.25
RARA-208ENST00000577646 NKX2-4Q9H2Z4 354 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 CLSTN2Q9H4D0 955 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 RNF19AQ9NV58 838 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 KIAA1468Q9P260 1216 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 PARP2Q9UGN5 583 aa13.51□□□□□ -0.25
RARA-208ENST00000577646 AGO2Q9UKV8 859 aaKnown RBP13.51□□□□□ -0.25
RARA-208ENST00000577646 CHD9Q3L8U1 2897 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 LINC01553A4QN01 128 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 ARL5CA6NH57 179 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 TBKBP1A7MCY6 615 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 C5orf67F2Z3F1 127 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 CA3P07451 260 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 PRR29P0C7W0 189 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 KCNE1P15382 129 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 LAG3P18627 525 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 PPM1AP35813 382 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 NFIL3Q16649 462 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 CLLU1OSQ5K130 101 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 PPP2R2DQ66LE6 453 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 ALKAL1Q6UXT8 129 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 CDR2LQ86X02 465 aaPredicted RBP13.5□□□□□ -0.25
RARA-208ENST00000577646 NT5DC4Q86YG4 428 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 SLC9A9Q8IVB4 645 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.5□□□□□ -0.25
RARA-208ENST00000577646 MAFAQ8NHW3 353 aaPredicted RBP13.5□□□□□ -0.25
RARA-208ENST00000577646 HELQQ8TDG4 1101 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 P2RX5Q93086 422 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 ZBTB45Q96K62 511 aaPredicted RBP13.5□□□□□ -0.25
RARA-208ENST00000577646 RPS6KC1Q96S38 1066 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 TMEM175Q9BSA9 504 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 NXF3Q9H4D5 531 aaKnown RBP13.5□□□□□ -0.25
RARA-208ENST00000577646 TYW1Q9NV66 732 aaKnown RBP13.5□□□□□ -0.25
RARA-208ENST00000577646 SLC38A7Q9NVC3 462 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 ANKFY1Q9P2R3 1169 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 YBX2Q9Y2T7 364 aaKnown RBP13.5□□□□□ -0.25
RARA-208ENST00000577646 DERAQ9Y315 318 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 PCDHB12Q9Y5F1 795 aa13.5□□□□□ -0.25
RARA-208ENST00000577646 ANKRD63C9JTQ0 380 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 XPOTO43592 962 aaKnown RBP13.49□□□□□ -0.25
RARA-208ENST00000577646 RECQL4O94761 1208 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 IL18RAPO95256 599 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 THP07101 528 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 FGFR1P11362 822 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 PAX3P23760 479 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 RPL13P26373 211 aaKnown RBP13.49□□□□□ -0.25
RARA-208ENST00000577646 HOXD13P35453 343 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 BMPR1AP36894 532 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 TAP1Q03518 808 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 RNASELQ05823 741 aaKnown RBP13.49□□□□□ -0.25
RARA-208ENST00000577646 KCNA1Q09470 495 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 GRIK3Q13003 919 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 SURF1Q15526 300 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 CT47A1Q5JQC4 288 aaPredicted RBP13.49□□□□□ -0.25
RARA-208ENST00000577646 SLC39A4Q6P5W5 647 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 ZBTB33Q86T24 672 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 THNSL1Q8IYQ7 743 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 KIAA0895Q8NCT3 520 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 FAM193BQ96PV7 902 aaPredicted RBP13.49□□□□□ -0.25
RARA-208ENST00000577646 NUP62CLQ9H1M0 184 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 RNF39Q9H2S5 420 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 ASB7Q9H672 318 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 RPF1Q9H9Y2 349 aaKnown RBP13.49□□□□□ -0.25
RARA-208ENST00000577646 SNTG2Q9NY99 539 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 CPSF3Q9UKF6 684 aaKnown RBP13.49□□□□□ -0.25
RARA-208ENST00000577646 TRAF3IP3Q9Y228 551 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 PTPRSQ13332 1948 aa13.49□□□□□ -0.25
RARA-208ENST00000577646 TGFB1I1O43294 461 aa13.48□□□□□ -0.25
RARA-208ENST00000577646 CALUO43852 315 aaPredicted RBP13.48□□□□□ -0.25
RARA-208ENST00000577646 EXTL3O43909 919 aa13.48□□□□□ -0.25
RARA-208ENST00000577646 FAM189A1O60320 539 aa13.48□□□□□ -0.25
RARA-208ENST00000577646 ALDH2P05091 517 aa13.48□□□□□ -0.25
RARA-208ENST00000577646 ADSSP30520 456 aa13.48□□□□□ -0.25
RARA-208ENST00000577646 ALDH7A1P49419 539 aaKnown RBP13.48□□□□□ -0.25
RARA-208ENST00000577646 UBE3AQ05086 875 aa13.48□□□□□ -0.25
RARA-208ENST00000577646 MORC3Q14149 939 aa13.48□□□□□ -0.25
RARA-208ENST00000577646 SKOR2Q2VWA4 1001 aaPredicted RBP13.48□□□□□ -0.25
RARA-208ENST00000577646 EDRF1Q3B7T1 1238 aa13.48□□□□□ -0.25
RARA-208ENST00000577646 ARMCX5Q6P1M9 558 aa13.48□□□□□ -0.25
RARA-208ENST00000577646 TMCO2Q7Z6W1 182 aaPredicted RBP13.48□□□□□ -0.25
RARA-208ENST00000577646 TMEM192Q8IY95 271 aa13.48□□□□□ -0.25
RARA-208ENST00000577646 LPPQ93052 612 aa13.48□□□□□ -0.25
RARA-208ENST00000577646 HPS3Q969F9 1004 aa13.48□□□□□ -0.25
RARA-208ENST00000577646 SYAP1Q96A49 352 aaPredicted RBP13.48□□□□□ -0.25
RARA-208ENST00000577646 DDX27Q96GQ7 796 aaKnown RBP13.48□□□□□ -0.25
RARA-208ENST00000577646 DHTKD1Q96HY7 919 aaPredicted RBP13.48□□□□□ -0.25
RARA-208ENST00000577646 FBXL18Q96ME1 805 aa13.48□□□□□ -0.25
RARA-208ENST00000577646 UROC1Q96N76 676 aa13.48□□□□□ -0.25
RARA-208ENST00000577646 ZNF558Q96NG5 402 aa13.48□□□□□ -0.25
RARA-208ENST00000577646 GAD1Q99259 594 aa13.48□□□□□ -0.25
RARA-208ENST00000577646 C11orf84Q9BUA3 381 aaPredicted RBP13.48□□□□□ -0.25
RARA-208ENST00000577646 FGFBP2Q9BYJ0 223 aa13.48□□□□□ -0.25
RARA-208ENST00000577646 LMAN2LQ9H0V9 348 aa13.48□□□□□ -0.25
RARA-208ENST00000577646 KCTD10Q9H3F6 313 aa13.48□□□□□ -0.25
RARA-208ENST00000577646 PRDM12Q9H4Q4 367 aa13.48□□□□□ -0.25
RARA-208ENST00000577646 CWH43Q9H720 699 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms