RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 SYBUQ9NX95 663 aa6.7□□□□□ -1.34
SMCHD1-202ENST00000577300 POGKQ9P215 609 aa6.7□□□□□ -1.34
SMCHD1-202ENST00000577300 ZNHIT2Q9UHR6 403 aa6.7□□□□□ -1.34
SMCHD1-202ENST00000577300 POLR2AP24928 1970 aaKnown RBP6.69□□□□□ -1.34
SMCHD1-202ENST00000577300 HLA-DOAP06340 250 aa6.69□□□□□ -1.34
SMCHD1-202ENST00000577300 AVPR1BP47901 424 aa6.69□□□□□ -1.34
SMCHD1-202ENST00000577300 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.69□□□□□ -1.34
SMCHD1-202ENST00000577300 MST1LQ2TV78 715 aa6.69□□□□□ -1.34
SMCHD1-202ENST00000577300 TAF7LQ5H9L4 462 aa6.69□□□□□ -1.34
SMCHD1-202ENST00000577300 FAM47AQ5JRC9 791 aa6.69□□□□□ -1.34
SMCHD1-202ENST00000577300 OLFML1Q6UWY5 402 aa6.69□□□□□ -1.34
SMCHD1-202ENST00000577300 DDX46Q7L014 1031 aaKnown RBP6.69□□□□□ -1.34
SMCHD1-202ENST00000577300 THNSL2Q86YJ6 484 aa6.69□□□□□ -1.34
SMCHD1-202ENST00000577300 CPEB3Q8NE35 698 aaKnown RBP6.69□□□□□ -1.34
SMCHD1-202ENST00000577300 SUPT20HQ8NEM7 779 aa6.69□□□□□ -1.34
SMCHD1-202ENST00000577300 RIOX1Q9H6W3 641 aa6.69□□□□□ -1.34
SMCHD1-202ENST00000577300 APOBEC2Q9Y235 224 aaKnown RBP6.69□□□□□ -1.34
SMCHD1-202ENST00000577300 MARCH11A6NNE9 402 aa6.68□□□□□ -1.34
SMCHD1-202ENST00000577300 ZAR1LA6NP61 321 aa6.68□□□□□ -1.34
SMCHD1-202ENST00000577300 ID4P47928 161 aa6.68□□□□□ -1.34
SMCHD1-202ENST00000577300 GUCY1B3Q02153 619 aa6.68□□□□□ -1.34
SMCHD1-202ENST00000577300 GJC2Q5T442 439 aaPredicted RBP6.68□□□□□ -1.34
SMCHD1-202ENST00000577300 HDGFL2Q7Z4V5 671 aaPredicted RBP6.68□□□□□ -1.34
SMCHD1-202ENST00000577300 NOP9Q86U38 636 aaKnown RBP6.68□□□□□ -1.34
SMCHD1-202ENST00000577300 LCORLQ8N3X6 602 aa6.68□□□□□ -1.34
SMCHD1-202ENST00000577300 RNF169Q8NCN4 708 aa6.68□□□□□ -1.34
SMCHD1-202ENST00000577300 LINC00476Q8WZB0 136 aa6.68□□□□□ -1.34
SMCHD1-202ENST00000577300 ADAM2Q99965 735 aa6.68□□□□□ -1.34
SMCHD1-202ENST00000577300 SYNPO2LQ9H987 977 aa6.68□□□□□ -1.34
SMCHD1-202ENST00000577300 DPP7Q9UHL4 492 aa6.68□□□□□ -1.34
SMCHD1-202ENST00000577300 PIPSLA2A3N6 862 aa6.67□□□□□ -1.34
SMCHD1-202ENST00000577300 DDX6P26196 483 aaKnown RBP eCLIP6.67□□□□□ -1.34
SMCHD1-202ENST00000577300 CANXP27824 592 aaKnown RBP6.67□□□□□ -1.34
SMCHD1-202ENST00000577300 GYS2P54840 703 aa6.67□□□□□ -1.34
SMCHD1-202ENST00000577300 CLRN1P58418 232 aa6.67□□□□□ -1.34
SMCHD1-202ENST00000577300 BLOC1S1P78537 153 aa6.67□□□□□ -1.34
SMCHD1-202ENST00000577300 MRPS9P82933 396 aaKnown RBP6.67□□□□□ -1.34
SMCHD1-202ENST00000577300 ARMC6Q6NXE6 501 aa6.67□□□□□ -1.34
SMCHD1-202ENST00000577300 ZNF572Q7Z3I7 529 aaPredicted RBP6.67□□□□□ -1.34
SMCHD1-202ENST00000577300 GPR156Q8NFN8 814 aa6.67□□□□□ -1.34
SMCHD1-202ENST00000577300 OR7D4Q8NG98 312 aa6.67□□□□□ -1.34
SMCHD1-202ENST00000577300 BCO1Q9HAY6 547 aa6.67□□□□□ -1.34
SMCHD1-202ENST00000577300 TBX22Q9Y458 520 aa6.67□□□□□ -1.34
SMCHD1-202ENST00000577300 FPGT-TNNI3KV9GXZ4 949 aa6.67□□□□□ -1.34
SMCHD1-202ENST00000577300 DRGXA6NNA5 263 aa6.66□□□□□ -1.34
SMCHD1-202ENST00000577300 CXorf49A8MYA2 514 aaPredicted RBP6.66□□□□□ -1.34
SMCHD1-202ENST00000577300 ADCY6O43306 1168 aa6.66□□□□□ -1.34
SMCHD1-202ENST00000577300 SNRPA1P09661 255 aaKnown RBP6.66□□□□□ -1.34
SMCHD1-202ENST00000577300 HKR1P10072 659 aa6.66□□□□□ -1.34
SMCHD1-202ENST00000577300 KRTAP1-1Q07627 177 aa6.66□□□□□ -1.34
SMCHD1-202ENST00000577300 ATXN7L2Q5T6C5 722 aaPredicted RBP6.66□□□□□ -1.34
SMCHD1-202ENST00000577300 ABHD17BQ5VST6 288 aa6.66□□□□□ -1.34
SMCHD1-202ENST00000577300 AGAP9Q5VTM2 703 aa6.66□□□□□ -1.34
SMCHD1-202ENST00000577300 TRMT2AQ8IZ69 625 aaKnown RBP6.66□□□□□ -1.34
SMCHD1-202ENST00000577300 SLC35B2Q8TB61 432 aa6.66□□□□□ -1.34
SMCHD1-202ENST00000577300 RIN2Q8WYP3 895 aaPredicted RBP6.66□□□□□ -1.34
SMCHD1-202ENST00000577300 VOPP1Q96AW1 172 aa6.66□□□□□ -1.34
SMCHD1-202ENST00000577300 NEU1Q99519 415 aa6.66□□□□□ -1.34
SMCHD1-202ENST00000577300 EDARQ9UNE0 448 aa6.66□□□□□ -1.34
SMCHD1-202ENST00000577300 USP15Q9Y4E8 981 aaPredicted RBP6.66□□□□□ -1.34
SMCHD1-202ENST00000577300 EPN1Q9Y6I3 576 aaPredicted RBP6.66□□□□□ -1.34
SMCHD1-202ENST00000577300 AKR1B10O60218 316 aa6.65□□□□□ -1.34
SMCHD1-202ENST00000577300 PTPN7P35236 360 aa6.65□□□□□ -1.34
SMCHD1-202ENST00000577300 CDK17Q00537 523 aa6.65□□□□□ -1.34
SMCHD1-202ENST00000577300 STRIP1Q5VSL9 837 aa6.65□□□□□ -1.34
SMCHD1-202ENST00000577300 RHOT2Q8IXI1 618 aa6.65□□□□□ -1.34
SMCHD1-202ENST00000577300 CMTR2Q8IYT2 770 aaKnown RBP6.65□□□□□ -1.34
SMCHD1-202ENST00000577300 TSPEARQ8WU66 669 aa6.65□□□□□ -1.34
SMCHD1-202ENST00000577300 AUTS2Q8WXX7 1259 aa6.65□□□□□ -1.34
SMCHD1-202ENST00000577300 ORAI2Q96SN7 254 aa6.65□□□□□ -1.34
SMCHD1-202ENST00000577300 SCOCQ9UIL1 159 aa6.65□□□□□ -1.34
SMCHD1-202ENST00000577300 ATP11BQ9Y2G3 1177 aa6.65□□□□□ -1.34
SMCHD1-202ENST00000577300 ATRNL1Q5VV63 1379 aa6.65□□□□□ -1.35
SMCHD1-202ENST00000577300 UNC119BA6NIH7 251 aa6.64□□□□□ -1.35
SMCHD1-202ENST00000577300 CFIP05156 583 aa6.64□□□□□ -1.35
SMCHD1-202ENST00000577300 EGR2P11161 476 aaPredicted RBP6.64□□□□□ -1.35
SMCHD1-202ENST00000577300 MTHFD2P13995 350 aa6.64□□□□□ -1.35
SMCHD1-202ENST00000577300 ALOX15P16050 662 aaPredicted RBP6.64□□□□□ -1.35
SMCHD1-202ENST00000577300 TYRP1P17643 537 aa6.64□□□□□ -1.35
SMCHD1-202ENST00000577300 ADSLP30566 484 aaPredicted RBP6.64□□□□□ -1.35
SMCHD1-202ENST00000577300 CHN2P52757 468 aa6.64□□□□□ -1.35
SMCHD1-202ENST00000577300 SEC24CP53992 1094 aa6.64□□□□□ -1.35
SMCHD1-202ENST00000577300 MXRA7P84157 204 aa6.64□□□□□ -1.35
SMCHD1-202ENST00000577300 STRN3Q13033 797 aa6.64□□□□□ -1.35
SMCHD1-202ENST00000577300 SP140Q13342 867 aa6.64□□□□□ -1.35
SMCHD1-202ENST00000577300 TP53BP2Q13625 1128 aa6.64□□□□□ -1.35
SMCHD1-202ENST00000577300 ADRM1Q16186 407 aa6.64□□□□□ -1.35
SMCHD1-202ENST00000577300 FAM180AQ6UWF9 173 aa6.64□□□□□ -1.35
SMCHD1-202ENST00000577300 Q6ZVL8 140 aa6.64□□□□□ -1.35
SMCHD1-202ENST00000577300 REPS2Q8NFH8 660 aa6.64□□□□□ -1.35
SMCHD1-202ENST00000577300 LMBR1Q8WVP7 490 aa6.64□□□□□ -1.35
SMCHD1-202ENST00000577300 FATE1Q969F0 183 aa6.64□□□□□ -1.35
SMCHD1-202ENST00000577300 ZNF764Q96H86 408 aaPredicted RBP6.64□□□□□ -1.35
SMCHD1-202ENST00000577300 KIAA0355O15063 1070 aa6.63□□□□□ -1.35
SMCHD1-202ENST00000577300 BRINP1O60477 761 aa6.63□□□□□ -1.35
SMCHD1-202ENST00000577300 SPDEFO95238 335 aa6.63□□□□□ -1.35
SMCHD1-202ENST00000577300 ECHS1P30084 290 aa6.63□□□□□ -1.35
SMCHD1-202ENST00000577300 CLK3P49761 638 aaKnown RBP6.63□□□□□ -1.35
SMCHD1-202ENST00000577300 RESTQ13127 1097 aa6.63□□□□□ -1.35
SMCHD1-202ENST00000577300 CCDC142Q17RM4 750 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms