RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 TBX20Q9UMR3 447 aa25.75■■□□□ 1.71
SNF8-217ENST00000576353 PCDHGC5Q9Y5F6 944 aa25.75■■□□□ 1.71
SNF8-217ENST00000576353 MYO7AQ13402 2215 aa25.74■■□□□ 1.71
SNF8-217ENST00000576353 CLDN3O15551 220 aa25.74■■□□□ 1.71
SNF8-217ENST00000576353 THP07101 528 aa25.74■■□□□ 1.71
SNF8-217ENST00000576353 SMC1AQ14683 1233 aaKnown RBP25.74■■□□□ 1.71
SNF8-217ENST00000576353 CTC1Q2NKJ3 1217 aa25.74■■□□□ 1.71
SNF8-217ENST00000576353 RBM23Q86U06 439 aaKnown RBP25.74■■□□□ 1.71
SNF8-217ENST00000576353 EFHBQ8N7U6 833 aa25.74■■□□□ 1.71
SNF8-217ENST00000576353 MRPL43Q8N983 215 aaKnown RBP25.74■■□□□ 1.71
SNF8-217ENST00000576353 BCL7CQ8WUZ0 217 aaPredicted RBP25.74■■□□□ 1.71
SNF8-217ENST00000576353 COLEC11Q9BWP8 271 aa25.74■■□□□ 1.71
SNF8-217ENST00000576353 ABLIM1O14639 778 aa25.73■■□□□ 1.71
SNF8-217ENST00000576353 GTF2F1P35269 517 aaKnown RBP eCLIP25.73■■□□□ 1.71
SNF8-217ENST00000576353 GTF2BQ00403 316 aa25.73■■□□□ 1.71
SNF8-217ENST00000576353 AMPD3Q01432 767 aa25.73■■□□□ 1.71
SNF8-217ENST00000576353 ADAM15Q13444 863 aa25.73■■□□□ 1.71
SNF8-217ENST00000576353 E2F4Q16254 413 aa25.73■■□□□ 1.71
SNF8-217ENST00000576353 DNAJC19Q96DA6 116 aa25.73■■□□□ 1.71
SNF8-217ENST00000576353 SPATA32Q96LK8 384 aa25.73■■□□□ 1.71
SNF8-217ENST00000576353 FIZ1Q96SL8 496 aa25.73■■□□□ 1.71
SNF8-217ENST00000576353 TNMDQ9H2S6 317 aa25.73■■□□□ 1.71
SNF8-217ENST00000576353 ST6GALNAC4Q9H4F1 302 aa25.73■■□□□ 1.71
SNF8-217ENST00000576353 ANKFY1Q9P2R3 1169 aa25.73■■□□□ 1.71
SNF8-217ENST00000576353 PRG3Q9Y2Y8 225 aaPredicted RBP25.73■■□□□ 1.71
SNF8-217ENST00000576353 MYH15Q9Y2K3 1946 aa25.73■■□□□ 1.71
SNF8-217ENST00000576353 PTGESO14684 152 aa25.72■■□□□ 1.71
SNF8-217ENST00000576353 CXCL14O95715 111 aa25.72■■□□□ 1.71
SNF8-217ENST00000576353 NMT1P30419 496 aaKnown RBP25.72■■□□□ 1.71
SNF8-217ENST00000576353 LIG4P49917 911 aa25.72■■□□□ 1.71
SNF8-217ENST00000576353 TUSC3Q13454 348 aa25.72■■□□□ 1.71
SNF8-217ENST00000576353 NOLC1Q14978 699 aaKnown RBP eCLIP25.72■■□□□ 1.71
SNF8-217ENST00000576353 LEXMQ3ZCV2 418 aa25.72■■□□□ 1.71
SNF8-217ENST00000576353 RESP18Q5W5W9 173 aa25.72■■□□□ 1.71
SNF8-217ENST00000576353 LEO1Q8WVC0 666 aaPredicted RBP25.72■■□□□ 1.71
SNF8-217ENST00000576353 DHX58Q96C10 678 aa25.72■■□□□ 1.71
SNF8-217ENST00000576353 ZBTB45Q96K62 511 aaPredicted RBP25.72■■□□□ 1.71
SNF8-217ENST00000576353 ACAP3Q96P50 834 aa25.72■■□□□ 1.71
SNF8-217ENST00000576353 PYM1Q9BRP8 204 aaKnown RBP25.72■■□□□ 1.71
SNF8-217ENST00000576353 ZBP1Q9H171 429 aa25.72■■□□□ 1.71
SNF8-217ENST00000576353 PLXNA4Q9HCM2 1894 aa25.71■■□□□ 1.71
SNF8-217ENST00000576353 UNC80Q8N2C7 3258 aa25.71■■□□□ 1.71
SNF8-217ENST00000576353 HIDE1A8MVS5 230 aa25.71■■□□□ 1.71
SNF8-217ENST00000576353 HNRNPDLO14979 420 aaKnown RBP25.71■■□□□ 1.71
SNF8-217ENST00000576353 PIGRP01833 764 aa25.71■■□□□ 1.71
SNF8-217ENST00000576353 CTSAP10619 480 aa25.71■■□□□ 1.71
SNF8-217ENST00000576353 IDEP14735 1019 aa25.71■■□□□ 1.71
SNF8-217ENST00000576353 MATR3P43243 847 aaKnown RBP eCLIP25.71■■□□□ 1.71
SNF8-217ENST00000576353 KCNQ1P51787 676 aa25.71■■□□□ 1.71
SNF8-217ENST00000576353 OSTNP61366 133 aa25.71■■□□□ 1.71
SNF8-217ENST00000576353 MCL1Q07820 350 aa25.71■■□□□ 1.71
SNF8-217ENST00000576353 DUSP6Q16828 381 aa25.71■■□□□ 1.71
SNF8-217ENST00000576353 ZNF720Q7Z2F6 126 aa25.71■■□□□ 1.71
SNF8-217ENST00000576353 SFR1Q86XK3 245 aa25.71■■□□□ 1.71
SNF8-217ENST00000576353 KBTBD4Q9NVX7 518 aa25.71■■□□□ 1.71
SNF8-217ENST00000576353 C2orf71A6NGG8 1288 aa25.7■■□□□ 1.7
SNF8-217ENST00000576353 PER2O15055 1255 aa25.7■■□□□ 1.7
SNF8-217ENST00000576353 POLR2DO15514 142 aaKnown RBP25.7■■□□□ 1.7
SNF8-217ENST00000576353 HARSP12081 509 aaKnown RBP25.7■■□□□ 1.7
SNF8-217ENST00000576353 BMP1P13497 986 aa25.7■■□□□ 1.7
SNF8-217ENST00000576353 CA8P35219 290 aa25.7■■□□□ 1.7
SNF8-217ENST00000576353 NUCB2P80303 420 aa25.7■■□□□ 1.7
SNF8-217ENST00000576353 PUS10Q3MIT2 529 aaKnown RBP25.7■■□□□ 1.7
SNF8-217ENST00000576353 HERC4Q5GLZ8 1057 aaPredicted RBP25.7■■□□□ 1.7
SNF8-217ENST00000576353 CEP120Q8N960 986 aa25.7■■□□□ 1.7
SNF8-217ENST00000576353 TMEM87AQ8NBN3 555 aa25.7■■□□□ 1.7
SNF8-217ENST00000576353 SCAND2PQ9GZW5 306 aaPredicted RBP25.7■■□□□ 1.7
SNF8-217ENST00000576353 MRPL44Q9H9J2 332 aaKnown RBP25.7■■□□□ 1.7
SNF8-217ENST00000576353 MAGEF1Q9HAY2 307 aa25.7■■□□□ 1.7
SNF8-217ENST00000576353 PANK4Q9NVE7 773 aa25.7■■□□□ 1.7
SNF8-217ENST00000576353 MARCH5Q9NX47 278 aa25.7■■□□□ 1.7
SNF8-217ENST00000576353 IRAK3Q9Y616 596 aa25.7■■□□□ 1.7
SNF8-217ENST00000576353 H3BQ06 376 aaPredicted RBP25.69■■□□□ 1.7
SNF8-217ENST00000576353 LTBRP36941 435 aa25.69■■□□□ 1.7
SNF8-217ENST00000576353 KYAT1Q16773 422 aa25.69■■□□□ 1.7
SNF8-217ENST00000576353 ZC2HC1CQ53FD0 456 aaPredicted RBP25.69■■□□□ 1.7
SNF8-217ENST00000576353 MAP4K3Q8IVH8 894 aa25.69■■□□□ 1.7
SNF8-217ENST00000576353 CCDC65Q8IXS2 484 aa25.69■■□□□ 1.7
SNF8-217ENST00000576353 HVCN1Q96D96 273 aa25.69■■□□□ 1.7
SNF8-217ENST00000576353 VN1R3Q9BXE9 311 aa25.69■■□□□ 1.7
SNF8-217ENST00000576353 OLFML3Q9NRN5 406 aa25.69■■□□□ 1.7
SNF8-217ENST00000576353 REV3LO60673 3130 aa25.68■■□□□ 1.7
SNF8-217ENST00000576353 FRMD3A2A2Y4 597 aa25.68■■□□□ 1.7
SNF8-217ENST00000576353 LINC01565O15544 149 aa25.68■■□□□ 1.7
SNF8-217ENST00000576353 SRGAP2BP0DMP2 458 aa25.68■■□□□ 1.7
SNF8-217ENST00000576353 NDUFV1P49821 464 aa25.68■■□□□ 1.7
SNF8-217ENST00000576353 HSP90AA2PQ14568 343 aaPredicted RBP25.68■■□□□ 1.7
SNF8-217ENST00000576353 XKR4Q5GH76 650 aa25.68■■□□□ 1.7
SNF8-217ENST00000576353 ADALQ6DHV7 355 aa25.68■■□□□ 1.7
SNF8-217ENST00000576353 ALKAL1Q6UXT8 129 aa25.68■■□□□ 1.7
SNF8-217ENST00000576353 STAMQ92783 540 aa25.68■■□□□ 1.7
SNF8-217ENST00000576353 CXCL16Q9H2A7 254 aa25.68■■□□□ 1.7
SNF8-217ENST00000576353 KCNH3Q9ULD8 1083 aa25.68■■□□□ 1.7
SNF8-217ENST00000576353 SSX2IPQ9Y2D8 614 aa25.68■■□□□ 1.7
SNF8-217ENST00000576353 A0A0C4DFX4 3053 aa25.68■■□□□ 1.7
SNF8-217ENST00000576353 MYH11P35749 1972 aa25.67■■□□□ 1.7
SNF8-217ENST00000576353 SMIM28A0A1B0GU29 152 aa25.67■■□□□ 1.7
SNF8-217ENST00000576353 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.67■■□□□ 1.7
SNF8-217ENST00000576353 CASTOR2A6NHX0 329 aa25.67■■□□□ 1.7
SNF8-217ENST00000576353 TADA2AO75478 443 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms