RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 NOLC1Q14978 699 aaKnown RBP eCLIP16.72■□□□□ 0.27
SMG6-220ENST00000576218 PUS10Q3MIT2 529 aaKnown RBP16.72■□□□□ 0.27
SMG6-220ENST00000576218 LEXMQ3ZCV2 418 aa16.72■□□□□ 0.27
SMG6-220ENST00000576218 PTCRAQ6ISU1 281 aaPredicted RBP16.72■□□□□ 0.27
SMG6-220ENST00000576218 LLGL2Q6P1M3 1020 aa16.72■□□□□ 0.27
SMG6-220ENST00000576218 COLGALT2Q8IYK4 626 aa16.72■□□□□ 0.27
SMG6-220ENST00000576218 EFHBQ8N7U6 833 aa16.72■□□□□ 0.27
SMG6-220ENST00000576218 LRRC15Q8TF66 581 aa16.72■□□□□ 0.27
SMG6-220ENST00000576218 DDX12PQ92771 950 aa16.72■□□□□ 0.27
SMG6-220ENST00000576218 NTPCRQ9BSD7 190 aaKnown RBP16.72■□□□□ 0.27
SMG6-220ENST00000576218 CDT1Q9H211 546 aa16.72■□□□□ 0.27
SMG6-220ENST00000576218 FAM13BQ9NYF5 915 aa16.72■□□□□ 0.27
SMG6-220ENST00000576218 CASTOR2A6NHX0 329 aa16.71■□□□□ 0.27
SMG6-220ENST00000576218 INPPL1O15357 1258 aa16.71■□□□□ 0.27
SMG6-220ENST00000576218 LINC01565O15544 149 aa16.71■□□□□ 0.27
SMG6-220ENST00000576218 CLDN3O15551 220 aa16.71■□□□□ 0.27
SMG6-220ENST00000576218 B4GALT3O60512 393 aa16.71■□□□□ 0.27
SMG6-220ENST00000576218 TOM1L1O75674 476 aa16.71■□□□□ 0.27
SMG6-220ENST00000576218 URODP06132 367 aa16.71■□□□□ 0.27
SMG6-220ENST00000576218 MCF2P10911 925 aa16.71■□□□□ 0.27
SMG6-220ENST00000576218 TUSC3Q13454 348 aa16.71■□□□□ 0.27
SMG6-220ENST00000576218 KIAA1841Q6NSI8 718 aa16.71■□□□□ 0.27
SMG6-220ENST00000576218 TAS1R3Q7RTX0 852 aa16.71■□□□□ 0.27
SMG6-220ENST00000576218 DHX58Q96C10 678 aa16.71■□□□□ 0.27
SMG6-220ENST00000576218 LRRC27Q9C0I9 530 aa16.71■□□□□ 0.27
SMG6-220ENST00000576218 MIOSQ9NXC5 875 aa16.71■□□□□ 0.27
SMG6-220ENST00000576218 HIDE1A8MVS5 230 aa16.7■□□□□ 0.26
SMG6-220ENST00000576218 TADA2AO75478 443 aa16.7■□□□□ 0.26
SMG6-220ENST00000576218 GRM5P41594 1212 aa16.7■□□□□ 0.26
SMG6-220ENST00000576218 ZNF131P52739 623 aa16.7■□□□□ 0.26
SMG6-220ENST00000576218 KRT85P78386 507 aa16.7■□□□□ 0.26
SMG6-220ENST00000576218 DUSP6Q16828 381 aa16.7■□□□□ 0.26
SMG6-220ENST00000576218 GLRA4Q5JXX5 417 aa16.7■□□□□ 0.26
SMG6-220ENST00000576218 SFR1Q86XK3 245 aa16.7■□□□□ 0.26
SMG6-220ENST00000576218 BCL7CQ8WUZ0 217 aaPredicted RBP16.7■□□□□ 0.26
SMG6-220ENST00000576218 AUTS2Q8WXX7 1259 aa16.7■□□□□ 0.26
SMG6-220ENST00000576218 ACAP3Q96P50 834 aa16.7■□□□□ 0.26
SMG6-220ENST00000576218 EMILIN2Q9BXX0 1053 aa16.7■□□□□ 0.26
SMG6-220ENST00000576218 ZBP1Q9H171 429 aa16.7■□□□□ 0.26
SMG6-220ENST00000576218 MRPL44Q9H9J2 332 aaKnown RBP16.7■□□□□ 0.26
SMG6-220ENST00000576218 MRPL17Q9NRX2 175 aaKnown RBP16.7■□□□□ 0.26
SMG6-220ENST00000576218 CD207Q9UJ71 328 aa16.7■□□□□ 0.26
SMG6-220ENST00000576218 BARX2Q9UMQ3 279 aaPredicted RBP16.7■□□□□ 0.26
SMG6-220ENST00000576218 TBX20Q9UMR3 447 aa16.7■□□□□ 0.26
SMG6-220ENST00000576218 TDRD15B5MCY1 1934 aaKnown RBP16.7■□□□□ 0.26
SMG6-220ENST00000576218 ATG2AQ2TAZ0 1938 aa16.7■□□□□ 0.26
SMG6-220ENST00000576218 BRWD1Q9NSI6 2320 aa16.69■□□□□ 0.26
SMG6-220ENST00000576218 C2orf71A6NGG8 1288 aa16.69■□□□□ 0.26
SMG6-220ENST00000576218 TULP1O00294 542 aaPredicted RBP16.69■□□□□ 0.26
SMG6-220ENST00000576218 C2CD2LO14523 706 aa16.69■□□□□ 0.26
SMG6-220ENST00000576218 TBX10O75333 385 aa16.69■□□□□ 0.26
SMG6-220ENST00000576218 CTSAP10619 480 aa16.69■□□□□ 0.26
SMG6-220ENST00000576218 GAP43P17677 238 aa16.69■□□□□ 0.26
SMG6-220ENST00000576218 NMT1P30419 496 aaKnown RBP16.69■□□□□ 0.26
SMG6-220ENST00000576218 AMPD3Q01432 767 aa16.69■□□□□ 0.26
SMG6-220ENST00000576218 DSC1Q08554 894 aa16.69■□□□□ 0.26
SMG6-220ENST00000576218 ADAM15Q13444 863 aa16.69■□□□□ 0.26
SMG6-220ENST00000576218 HSP90AA2PQ14568 343 aaPredicted RBP16.69■□□□□ 0.26
SMG6-220ENST00000576218 ZPBP2Q6X784 338 aa16.69■□□□□ 0.26
SMG6-220ENST00000576218 CEP120Q8N960 986 aa16.69■□□□□ 0.26
SMG6-220ENST00000576218 MRPL43Q8N983 215 aaKnown RBP16.69■□□□□ 0.26
SMG6-220ENST00000576218 IQUBQ8NA54 791 aa16.69■□□□□ 0.26
SMG6-220ENST00000576218 HASPINQ8TF76 798 aa16.69■□□□□ 0.26
SMG6-220ENST00000576218 RABGGTAQ92696 567 aa16.69■□□□□ 0.26
SMG6-220ENST00000576218 SPATA32Q96LK8 384 aa16.69■□□□□ 0.26
SMG6-220ENST00000576218 SSX2IPQ9Y2D8 614 aa16.69■□□□□ 0.26
SMG6-220ENST00000576218 A0A0C4DFX4 3053 aa16.69■□□□□ 0.26
SMG6-220ENST00000576218 REV3LO60673 3130 aa16.68■□□□□ 0.26
SMG6-220ENST00000576218 MYMKA6NI61 221 aa16.68■□□□□ 0.26
SMG6-220ENST00000576218 BRD1O95696 1058 aa16.68■□□□□ 0.26
SMG6-220ENST00000576218 SOD2P04179 222 aa16.68■□□□□ 0.26
SMG6-220ENST00000576218 BMP1P13497 986 aa16.68■□□□□ 0.26
SMG6-220ENST00000576218 CTC1Q2NKJ3 1217 aa16.68■□□□□ 0.26
SMG6-220ENST00000576218 TPRNQ4KMQ1 711 aa16.68■□□□□ 0.26
SMG6-220ENST00000576218 HERC4Q5GLZ8 1057 aaPredicted RBP16.68■□□□□ 0.26
SMG6-220ENST00000576218 CCDC65Q8IXS2 484 aa16.68■□□□□ 0.26
SMG6-220ENST00000576218 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.68■□□□□ 0.26
SMG6-220ENST00000576218 CASP10Q92851 521 aa16.68■□□□□ 0.26
SMG6-220ENST00000576218 ZBTB45Q96K62 511 aaPredicted RBP16.68■□□□□ 0.26
SMG6-220ENST00000576218 HERC2P3Q9BVR0 1158 aa16.68■□□□□ 0.26
SMG6-220ENST00000576218 CUEDC2Q9H467 287 aa16.68■□□□□ 0.26
SMG6-220ENST00000576218 SLC38A7Q9NVC3 462 aa16.68■□□□□ 0.26
SMG6-220ENST00000576218 MARCH5Q9NX47 278 aa16.68■□□□□ 0.26
SMG6-220ENST00000576218 TBC1D7Q9P0N9 293 aa16.68■□□□□ 0.26
SMG6-220ENST00000576218 SEL1LQ9UBV2 794 aa16.68■□□□□ 0.26
SMG6-220ENST00000576218 ADAM28Q9UKQ2 775 aa16.68■□□□□ 0.26
SMG6-220ENST00000576218 SF3B1O75533 1304 aaKnown RBP eCLIP16.68■□□□□ 0.26
SMG6-220ENST00000576218 A0A087X0B3 334 aa16.67■□□□□ 0.26
SMG6-220ENST00000576218 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.67■□□□□ 0.26
SMG6-220ENST00000576218 PTGESO14684 152 aa16.67■□□□□ 0.26
SMG6-220ENST00000576218 GCNT3O95395 438 aa16.67■□□□□ 0.26
SMG6-220ENST00000576218 IL9P15248 144 aa16.67■□□□□ 0.26
SMG6-220ENST00000576218 KLRC2P26717 231 aa16.67■□□□□ 0.26
SMG6-220ENST00000576218 SSTR3P32745 418 aaPredicted RBP16.67■□□□□ 0.26
SMG6-220ENST00000576218 GLUD2P49448 558 aa16.67■□□□□ 0.26
SMG6-220ENST00000576218 DLX2Q07687 328 aaPredicted RBP16.67■□□□□ 0.26
SMG6-220ENST00000576218 SMAD4Q13485 552 aaKnown RBP16.67■□□□□ 0.26
SMG6-220ENST00000576218 COL19A1Q14993 1142 aa16.67■□□□□ 0.26
SMG6-220ENST00000576218 FUT10Q6P4F1 479 aa16.67■□□□□ 0.26
SMG6-220ENST00000576218 SHC4Q6S5L8 630 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms