RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 PPM1KQ8N3J5 372 aa15.52■□□□□ 0.08
SCARF1-209ENST00000576012 ZNF653Q96CK0 615 aa15.52■□□□□ 0.08
SCARF1-209ENST00000576012 RUNDC3BQ96NL0 473 aa15.52■□□□□ 0.08
SCARF1-209ENST00000576012 TRIM4Q9C037 500 aa15.52■□□□□ 0.08
SCARF1-209ENST00000576012 TXLNGQ9NUQ3 528 aa15.52■□□□□ 0.08
SCARF1-209ENST00000576012 TRAF3IP3Q9Y228 551 aa15.52■□□□□ 0.08
SCARF1-209ENST00000576012 BCL9O00512 1426 aa15.52■□□□□ 0.07
SCARF1-209ENST00000576012 GOLGA8SH3BPF8 625 aa15.52■□□□□ 0.07
SCARF1-209ENST00000576012 GOLGA8MH3BSY2 632 aa15.52■□□□□ 0.07
SCARF1-209ENST00000576012 PDXKO00764 312 aa15.52■□□□□ 0.07
SCARF1-209ENST00000576012 CYP26A1O43174 497 aa15.52■□□□□ 0.07
SCARF1-209ENST00000576012 MTDHQ86UE4 582 aaKnown RBP15.52■□□□□ 0.07
SCARF1-209ENST00000576012 ZSWIM2Q8NEG5 633 aa15.52■□□□□ 0.07
SCARF1-209ENST00000576012 METTL14Q9HCE5 456 aaKnown RBP15.52■□□□□ 0.07
SCARF1-209ENST00000576012 FRMD4BQ9Y2L6 1034 aa15.52■□□□□ 0.07
SCARF1-209ENST00000576012 SPATA31A1Q5TZJ5 1347 aa15.52■□□□□ 0.07
SCARF1-209ENST00000576012 A0A0G2JND7 137 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 GOLGA8IPA6NC78 632 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 GOLGA8JA6NMD2 632 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 PYGLP06737 847 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 RCN1Q15293 331 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 DSTYKQ6XUX3 929 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 PPP4R3CPQ6ZMV5 832 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 OLIG1Q8TAK6 271 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 PCDHB18PQ96TA0 734 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 ANO3Q9BYT9 981 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 CYP39A1Q9NYL5 469 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 ZNF652Q9Y2D9 606 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 PNMA6FA0A0J9YX94 578 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 KRT36O76013 467 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 CA4P22748 312 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 NPEPPSP55786 919 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 IL9RQ01113 521 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 TSNAXIP1Q2TAA8 658 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 MDH1BQ5I0G3 518 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 KAZNQ674X7 775 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 LRRC8CQ8TDW0 803 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 HERPUD2Q9BSE4 406 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 GPR88Q9GZN0 384 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 CCDC134Q9H6E4 229 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 NINJ2Q9NZG7 142 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 APEX2Q9UBZ4 518 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 USTQ9Y2C2 406 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 R3HDM2Q9Y2K5 976 aaKnown RBP15.51■□□□□ 0.07
SCARF1-209ENST00000576012 PITPNM2Q9BZ72 1349 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 DDX39AO00148 427 aaKnown RBP15.51■□□□□ 0.07
SCARF1-209ENST00000576012 TTC4O95801 387 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 GPC5P78333 572 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 MTFR1Q15390 333 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 ZNF564Q8TBZ8 553 aaPredicted RBP15.51■□□□□ 0.07
SCARF1-209ENST00000576012 MTMR4Q9NYA4 1195 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 RABGAP1Q9Y3P9 1069 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 PCDHA3Q9Y5H8 950 aa15.51■□□□□ 0.07
SCARF1-209ENST00000576012 EML1O00423 815 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 GNPATO15228 680 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 BANF1O75531 89 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 SPATA31C1P0DKV0 1188 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 STRN3Q13033 797 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 USP4Q13107 963 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 BTNL9Q6UXG8 535 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 SLC47A2Q86VL8 602 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 CCDC127Q96BQ5 260 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 NMRK1Q9NWW6 199 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 PRKAG3Q9UGI9 489 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 SHANK3Q9BYB0 1731 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 O00370 1275 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 TTLL1O95922 423 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 ATF2P15336 505 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 GNAZP19086 355 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 PPP2R5EQ16537 467 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 CERKLQ49MI3 558 aaPredicted RBP15.5■□□□□ 0.07
SCARF1-209ENST00000576012 C16orf86Q6ZW13 317 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 HAUS1Q96CS2 278 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 CYTH2Q99418 400 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 P2RX7Q99572 595 aaKnown RBP15.5■□□□□ 0.07
SCARF1-209ENST00000576012 VPS37BQ9H9H4 285 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 NENFQ9UMX5 172 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 EMSYQ7Z589 1322 aa15.5■□□□□ 0.07
SCARF1-209ENST00000576012 EXOC1LA0A1B0GW35 172 aa15.49■□□□□ 0.07
SCARF1-209ENST00000576012 NVLO15381 856 aaKnown RBP15.49■□□□□ 0.07
SCARF1-209ENST00000576012 ETS2P15036 469 aa15.49■□□□□ 0.07
SCARF1-209ENST00000576012 SP100P23497 879 aaPredicted RBP15.49■□□□□ 0.07
SCARF1-209ENST00000576012 POLGP54098 1239 aaPredicted RBP15.49■□□□□ 0.07
SCARF1-209ENST00000576012 HS2ST1Q7LGA3 356 aa15.49■□□□□ 0.07
SCARF1-209ENST00000576012 SERPINB12Q96P63 405 aa15.49■□□□□ 0.07
SCARF1-209ENST00000576012 PCYOX1Q9UHG3 505 aa15.49■□□□□ 0.07
SCARF1-209ENST00000576012 PLCH1Q4KWH8 1693 aa15.49■□□□□ 0.07
SCARF1-209ENST00000576012 DOCK2Q92608 1830 aa15.49■□□□□ 0.07
SCARF1-209ENST00000576012 FAM86B1E9PN63 330 aa15.49■□□□□ 0.07
SCARF1-209ENST00000576012 MAPK13O15264 365 aa15.49■□□□□ 0.07
SCARF1-209ENST00000576012 FAM86B2P0C5J1 330 aa15.49■□□□□ 0.07
SCARF1-209ENST00000576012 RRM1P23921 792 aa15.49■□□□□ 0.07
SCARF1-209ENST00000576012 RPA3P35244 121 aaPredicted RBP15.49■□□□□ 0.07
SCARF1-209ENST00000576012 SERPINB4P48594 390 aa15.49■□□□□ 0.07
SCARF1-209ENST00000576012 PKN2Q16513 984 aaKnown RBP15.49■□□□□ 0.07
SCARF1-209ENST00000576012 QRICH1Q2TAL8 776 aa15.49■□□□□ 0.07
SCARF1-209ENST00000576012 ODR4Q5SWX8 454 aa15.49■□□□□ 0.07
SCARF1-209ENST00000576012 MAGEB18Q96M61 343 aa15.49■□□□□ 0.07
SCARF1-209ENST00000576012 ZBTB21Q9ULJ3 1066 aa15.49■□□□□ 0.07
SCARF1-209ENST00000576012 KLHL33A6NCF5 533 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms