RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	BICD1	Q96G01	975 aa		27.73	■■■□□ 2.03
SRRM2-223	ENST00000575701	FIZ1	Q96SL8	496 aa		27.73	■■■□□ 2.03
SRRM2-223	ENST00000575701	MAGEF1	Q9HAY2	307 aa		27.73	■■■□□ 2.03
SRRM2-223	ENST00000575701	GDA	Q9Y2T3	454 aa		27.73	■■■□□ 2.03
SRRM2-223	ENST00000575701	UNC80	Q8N2C7	3258 aa		27.73	■■■□□ 2.03
SRRM2-223	ENST00000575701	PIGR	P01833	764 aa		27.72	■■■□□ 2.03
SRRM2-223	ENST00000575701	GTF2B	Q00403	316 aa		27.72	■■■□□ 2.03
SRRM2-223	ENST00000575701	AMPD3	Q01432	767 aa		27.72	■■■□□ 2.03
SRRM2-223	ENST00000575701	NOLC1	Q14978	699 aa	Known RBP eCLIP	27.72	■■■□□ 2.03
SRRM2-223	ENST00000575701	CTC1	Q2NKJ3	1217 aa		27.72	■■■□□ 2.03
SRRM2-223	ENST00000575701	PLPP4	Q5VZY2	271 aa		27.72	■■■□□ 2.03
SRRM2-223	ENST00000575701	RESP18	Q5W5W9	173 aa		27.72	■■■□□ 2.03
SRRM2-223	ENST00000575701	ADGRD2	Q7Z7M1	963 aa		27.72	■■■□□ 2.03
SRRM2-223	ENST00000575701	SPATA32	Q96LK8	384 aa		27.72	■■■□□ 2.03
SRRM2-223	ENST00000575701	TLE6	Q9H808	572 aa		27.72	■■■□□ 2.03
SRRM2-223	ENST00000575701	CLDND1	Q9NY35	253 aa		27.72	■■■□□ 2.03
SRRM2-223	ENST00000575701	CLDN3	O15551	220 aa		27.71	■■■□□ 2.03
SRRM2-223	ENST00000575701	TH	P07101	528 aa		27.71	■■■□□ 2.03
SRRM2-223	ENST00000575701	OR1G1	P47890	313 aa		27.71	■■■□□ 2.03
SRRM2-223	ENST00000575701	TFF2	Q03403	129 aa		27.71	■■■□□ 2.03
SRRM2-223	ENST00000575701	TUSC3	Q13454	348 aa		27.71	■■■□□ 2.03
SRRM2-223	ENST00000575701	ZBTB33	Q86T24	672 aa		27.71	■■■□□ 2.03
SRRM2-223	ENST00000575701	SFR1	Q86XK3	245 aa		27.71	■■■□□ 2.03
SRRM2-223	ENST00000575701	VPS52	Q8N1B4	723 aa		27.71	■■■□□ 2.03
SRRM2-223	ENST00000575701	EFHB	Q8N7U6	833 aa		27.71	■■■□□ 2.03
SRRM2-223	ENST00000575701	DHX58	Q96C10	678 aa		27.71	■■■□□ 2.03
SRRM2-223	ENST00000575701	HVCN1	Q96D96	273 aa		27.71	■■■□□ 2.03
SRRM2-223	ENST00000575701	COLEC11	Q9BWP8	271 aa		27.71	■■■□□ 2.03
SRRM2-223	ENST00000575701	SCAND2P	Q9GZW5	306 aa	Predicted RBP	27.71	■■■□□ 2.03
SRRM2-223	ENST00000575701	ZBP1	Q9H171	429 aa		27.71	■■■□□ 2.03
SRRM2-223	ENST00000575701	KBTBD4	Q9NVX7	518 aa		27.71	■■■□□ 2.03
SRRM2-223	ENST00000575701	ANKFY1	Q9P2R3	1169 aa		27.71	■■■□□ 2.03
SRRM2-223	ENST00000575701	PTGES	O14684	152 aa		27.7	■■■□□ 2.02
SRRM2-223	ENST00000575701	HNRNPDL	O14979	420 aa	Known RBP	27.7	■■■□□ 2.02
SRRM2-223	ENST00000575701	KCNA5	P22460	613 aa		27.7	■■■□□ 2.02
SRRM2-223	ENST00000575701	NRIP1	P48552	1158 aa		27.7	■■■□□ 2.02
SRRM2-223	ENST00000575701	LIG4	P49917	911 aa		27.7	■■■□□ 2.02
SRRM2-223	ENST00000575701	NUCB2	P80303	420 aa		27.7	■■■□□ 2.02
SRRM2-223	ENST00000575701	MCL1	Q07820	350 aa		27.7	■■■□□ 2.02
SRRM2-223	ENST00000575701	LEXM	Q3ZCV2	418 aa		27.7	■■■□□ 2.02
SRRM2-223	ENST00000575701	MAP4K3	Q8IVH8	894 aa		27.7	■■■□□ 2.02
SRRM2-223	ENST00000575701	BCL7C	Q8WUZ0	217 aa	Predicted RBP	27.7	■■■□□ 2.02
SRRM2-223	ENST00000575701	LEO1	Q8WVC0	666 aa	Predicted RBP	27.7	■■■□□ 2.02
SRRM2-223	ENST00000575701	OLFML3	Q9NRN5	406 aa		27.7	■■■□□ 2.02
SRRM2-223	ENST00000575701	PRG3	Q9Y2Y8	225 aa	Predicted RBP	27.7	■■■□□ 2.02
SRRM2-223	ENST00000575701	PCDHGC5	Q9Y5F6	944 aa		27.7	■■■□□ 2.02
SRRM2-223	ENST00000575701	FRMD3	A2A2Y4	597 aa		27.69	■■■□□ 2.02
SRRM2-223	ENST00000575701	CTSA	P10619	480 aa		27.69	■■■□□ 2.02
SRRM2-223	ENST00000575701	NMT1	P30419	496 aa	Known RBP	27.69	■■■□□ 2.02
SRRM2-223	ENST00000575701	KYAT1	Q16773	422 aa		27.69	■■■□□ 2.02
SRRM2-223	ENST00000575701	CEP120	Q8N960	986 aa		27.69	■■■□□ 2.02
SRRM2-223	ENST00000575701	ACAP3	Q96P50	834 aa		27.69	■■■□□ 2.02
SRRM2-223	ENST00000575701	IGFLR1	Q9H665	355 aa		27.69	■■■□□ 2.02
SRRM2-223	ENST00000575701	MARCH5	Q9NX47	278 aa		27.69	■■■□□ 2.02
SRRM2-223	ENST00000575701	IRAK3	Q9Y616	596 aa		27.69	■■■□□ 2.02
SRRM2-223	ENST00000575701	MYO7A	Q13402	2215 aa		27.69	■■■□□ 2.02
SRRM2-223	ENST00000575701	IDE	P14735	1019 aa		27.68	■■■□□ 2.02
SRRM2-223	ENST00000575701	MATR3	P43243	847 aa	Known RBP eCLIP	27.68	■■■□□ 2.02
SRRM2-223	ENST00000575701	ADAM15	Q13444	863 aa		27.68	■■■□□ 2.02
SRRM2-223	ENST00000575701	ALCAM	Q13740	583 aa		27.68	■■■□□ 2.02
SRRM2-223	ENST00000575701	DUSP6	Q16828	381 aa		27.68	■■■□□ 2.02
SRRM2-223	ENST00000575701	PUS10	Q3MIT2	529 aa	Known RBP	27.68	■■■□□ 2.02
SRRM2-223	ENST00000575701	ADAL	Q6DHV7	355 aa		27.68	■■■□□ 2.02
SRRM2-223	ENST00000575701	EP400NL	Q6ZTU2	488 aa		27.68	■■■□□ 2.02
SRRM2-223	ENST00000575701	ZNF720	Q7Z2F6	126 aa		27.68	■■■□□ 2.02
SRRM2-223	ENST00000575701	CCDC65	Q8IXS2	484 aa		27.68	■■■□□ 2.02
SRRM2-223	ENST00000575701	MRPL43	Q8N983	215 aa	Known RBP	27.68	■■■□□ 2.02
SRRM2-223	ENST00000575701	ZBTB45	Q96K62	511 aa	Predicted RBP	27.68	■■■□□ 2.02
SRRM2-223	ENST00000575701	MRPL44	Q9H9J2	332 aa	Known RBP	27.68	■■■□□ 2.02
SRRM2-223	ENST00000575701	POLR2D	O15514	142 aa	Known RBP	27.67	■■■□□ 2.02
SRRM2-223	ENST00000575701	SRGAP2B	P0DMP2	458 aa		27.67	■■■□□ 2.02
SRRM2-223	ENST00000575701	HARS	P12081	509 aa	Known RBP	27.67	■■■□□ 2.02
SRRM2-223	ENST00000575701	GTF2F1	P35269	517 aa	Known RBP eCLIP	27.67	■■■□□ 2.02
SRRM2-223	ENST00000575701	XKR4	Q5GH76	650 aa		27.67	■■■□□ 2.02
SRRM2-223	ENST00000575701	HERC4	Q5GLZ8	1057 aa	Predicted RBP	27.67	■■■□□ 2.02
SRRM2-223	ENST00000575701	CNNM4	Q6P4Q7	775 aa		27.67	■■■□□ 2.02
SRRM2-223	ENST00000575701	RBM23	Q86U06	439 aa	Known RBP	27.67	■■■□□ 2.02
SRRM2-223	ENST00000575701	PANK4	Q9NVE7	773 aa		27.67	■■■□□ 2.02
SRRM2-223	ENST00000575701	C2orf71	A6NGG8	1288 aa		27.66	■■■□□ 2.02
SRRM2-223	ENST00000575701	HIDE1	A8MVS5	230 aa		27.66	■■■□□ 2.02
SRRM2-223	ENST00000575701	SOD2	P04179	222 aa		27.66	■■■□□ 2.02
SRRM2-223	ENST00000575701	OSTN	P61366	133 aa		27.66	■■■□□ 2.02
SRRM2-223	ENST00000575701	NAB2	Q15742	525 aa		27.66	■■■□□ 2.02
SRRM2-223	ENST00000575701	SNX27	Q96L92	541 aa		27.66	■■■□□ 2.02
SRRM2-223	ENST00000575701	HERC2P3	Q9BVR0	1158 aa		27.66	■■■□□ 2.02
SRRM2-223	ENST00000575701	VN1R3	Q9BXE9	311 aa		27.66	■■■□□ 2.02
SRRM2-223	ENST00000575701	TRIM9	Q9C026	710 aa		27.66	■■■□□ 2.02
SRRM2-223	ENST00000575701	KCNH3	Q9ULD8	1083 aa		27.66	■■■□□ 2.02
SRRM2-223	ENST00000575701	SSX2IP	Q9Y2D8	614 aa		27.66	■■■□□ 2.02
SRRM2-223	ENST00000575701	PPP1R37	O75864	691 aa		27.65	■■■□□ 2.02
SRRM2-223	ENST00000575701	CXCL14	O95715	111 aa		27.65	■■■□□ 2.02
SRRM2-223	ENST00000575701	CMA1	P23946	247 aa		27.65	■■■□□ 2.02
SRRM2-223	ENST00000575701	LTBR	P36941	435 aa		27.65	■■■□□ 2.02
SRRM2-223	ENST00000575701	NDUFV1	P49821	464 aa		27.65	■■■□□ 2.02
SRRM2-223	ENST00000575701	KCNQ1	P51787	676 aa		27.65	■■■□□ 2.02
SRRM2-223	ENST00000575701	HSP90AA2P	Q14568	343 aa	Predicted RBP	27.65	■■■□□ 2.02
SRRM2-223	ENST00000575701	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	27.65	■■■□□ 2.02
SRRM2-223	ENST00000575701	ALKAL1	Q6UXT8	129 aa		27.65	■■■□□ 2.02
SRRM2-223	ENST00000575701	RNF168	Q8IYW5	571 aa	Predicted RBP	27.65	■■■□□ 2.02
SRRM2-223	ENST00000575701	UROC1	Q96N76	676 aa		27.65	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms