RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 ACKR2O00590 384 aa23.31■■□□□ 1.32
CHRNB1-206ENST00000574054 RECQL4O94761 1208 aa23.31■■□□□ 1.32
CHRNB1-206ENST00000574054 PDGFBP01127 241 aaPredicted RBP23.31■■□□□ 1.32
CHRNB1-206ENST00000574054 SPATA31D3P0C874 917 aa23.31■■□□□ 1.32
CHRNB1-206ENST00000574054 TOB1P50616 345 aaPredicted RBP23.31■■□□□ 1.32
CHRNB1-206ENST00000574054 VCPP55072 806 aaKnown RBP23.31■■□□□ 1.32
CHRNB1-206ENST00000574054 TUSC3Q13454 348 aa23.31■■□□□ 1.32
CHRNB1-206ENST00000574054 HSP90AA2PQ14568 343 aaPredicted RBP23.31■■□□□ 1.32
CHRNB1-206ENST00000574054 C15orf39Q6ZRI6 1047 aa23.31■■□□□ 1.32
CHRNB1-206ENST00000574054 SPATA31D4Q6ZUB0 917 aa23.31■■□□□ 1.32
CHRNB1-206ENST00000574054 OTOP3Q7RTS5 596 aa23.31■■□□□ 1.32
CHRNB1-206ENST00000574054 PALB2Q86YC2 1186 aa23.31■■□□□ 1.32
CHRNB1-206ENST00000574054 GLYCTKQ8IVS8 523 aa23.31■■□□□ 1.32
CHRNB1-206ENST00000574054 HASPINQ8TF76 798 aa23.31■■□□□ 1.32
CHRNB1-206ENST00000574054 RIN2Q8WYP3 895 aaPredicted RBP23.31■■□□□ 1.32
CHRNB1-206ENST00000574054 KIFAP3Q92845 792 aa23.31■■□□□ 1.32
CHRNB1-206ENST00000574054 CHST7Q9NS84 486 aa23.31■■□□□ 1.32
CHRNB1-206ENST00000574054 CCDC195A0A1B0GUA6 201 aa23.3■■□□□ 1.32
CHRNB1-206ENST00000574054 EDN1P05305 212 aa23.3■■□□□ 1.32
CHRNB1-206ENST00000574054 PDIA5Q14554 519 aa23.3■■□□□ 1.32
CHRNB1-206ENST00000574054 RABEP1Q15276 862 aa23.3■■□□□ 1.32
CHRNB1-206ENST00000574054 EEF1DP3Q658K8 133 aa23.3■■□□□ 1.32
CHRNB1-206ENST00000574054 MCTP1Q6DN14 999 aa23.3■■□□□ 1.32
CHRNB1-206ENST00000574054 PAAF1Q9BRP4 392 aa23.3■■□□□ 1.32
CHRNB1-206ENST00000574054 GDAQ9Y2T3 454 aa23.3■■□□□ 1.32
CHRNB1-206ENST00000574054 KIF3AQ9Y496 699 aa23.3■■□□□ 1.32
CHRNB1-206ENST00000574054 STK24Q9Y6E0 443 aa23.3■■□□□ 1.32
CHRNB1-206ENST00000574054 SF3B1O75533 1304 aaKnown RBP eCLIP23.3■■□□□ 1.32
CHRNB1-206ENST00000574054 THP07101 528 aa23.29■■□□□ 1.32
CHRNB1-206ENST00000574054 RPL17P18621 184 aaKnown RBP23.29■■□□□ 1.32
CHRNB1-206ENST00000574054 EFNA5P52803 228 aa23.29■■□□□ 1.32
CHRNB1-206ENST00000574054 PTPN5P54829 565 aa23.29■■□□□ 1.32
CHRNB1-206ENST00000574054 DCAF4L1Q3SXM0 396 aa23.29■■□□□ 1.32
CHRNB1-206ENST00000574054 IGSF22Q8N9C0 903 aa23.29■■□□□ 1.32
CHRNB1-206ENST00000574054 CMASQ8NFW8 434 aaPredicted RBP23.29■■□□□ 1.32
CHRNB1-206ENST00000574054 PRRX2Q99811 253 aa23.29■■□□□ 1.32
CHRNB1-206ENST00000574054 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.29■■□□□ 1.32
CHRNB1-206ENST00000574054 PP2D1A8MPX8 630 aa23.28■■□□□ 1.32
CHRNB1-206ENST00000574054 PTGESO14684 152 aa23.28■■□□□ 1.32
CHRNB1-206ENST00000574054 ST18O60284 1047 aa23.28■■□□□ 1.32
CHRNB1-206ENST00000574054 RFPL2O75678 378 aa23.28■■□□□ 1.32
CHRNB1-206ENST00000574054 MRE11P49959 708 aa23.28■■□□□ 1.32
CHRNB1-206ENST00000574054 CREMQ03060 361 aa23.28■■□□□ 1.32
CHRNB1-206ENST00000574054 KRT79Q5XKE5 535 aa23.28■■□□□ 1.32
CHRNB1-206ENST00000574054 CXCL16Q9H2A7 254 aa23.28■■□□□ 1.32
CHRNB1-206ENST00000574054 DNM3Q9UQ16 869 aa23.28■■□□□ 1.32
CHRNB1-206ENST00000574054 PLXNA3P51805 1871 aa23.28■■□□□ 1.32
CHRNB1-206ENST00000574054 CCDC169A6NNP5 214 aa23.27■■□□□ 1.32
CHRNB1-206ENST00000574054 KIF4AO95239 1232 aa23.27■■□□□ 1.32
CHRNB1-206ENST00000574054 AVPR2P30518 371 aa23.27■■□□□ 1.32
CHRNB1-206ENST00000574054 NT5DC1Q5TFE4 455 aa23.27■■□□□ 1.32
CHRNB1-206ENST00000574054 ATF7IP2Q5U623 682 aa23.27■■□□□ 1.32
CHRNB1-206ENST00000574054 PRSS55Q6UWB4 352 aaPredicted RBP23.27■■□□□ 1.32
CHRNB1-206ENST00000574054 SMG7Q92540 1137 aaKnown RBP23.27■■□□□ 1.32
CHRNB1-206ENST00000574054 FNIP2Q9P278 1114 aa23.27■■□□□ 1.32
CHRNB1-206ENST00000574054 DENND4AQ7Z401 1863 aa23.27■■□□□ 1.32
CHRNB1-206ENST00000574054 E9PMD0 336 aa23.26■■□□□ 1.31
CHRNB1-206ENST00000574054 K7ERI5 159 aa23.26■■□□□ 1.31
CHRNB1-206ENST00000574054 LAD1O00515 517 aa23.26■■□□□ 1.31
CHRNB1-206ENST00000574054 TGM5O43548 720 aa23.26■■□□□ 1.31
CHRNB1-206ENST00000574054 CDC25AP30304 524 aa23.26■■□□□ 1.31
CHRNB1-206ENST00000574054 ZRSR1Q15695 479 aaKnown RBP23.26■■□□□ 1.31
CHRNB1-206ENST00000574054 RTP2Q5QGT7 225 aa23.26■■□□□ 1.31
CHRNB1-206ENST00000574054 DTHD1Q6ZMT9 781 aa23.26■■□□□ 1.31
CHRNB1-206ENST00000574054 APBB1IPQ7Z5R6 666 aaPredicted RBP23.26■■□□□ 1.31
CHRNB1-206ENST00000574054 CEP57Q86XR8 500 aa23.26■■□□□ 1.31
CHRNB1-206ENST00000574054 GPR65Q8IYL9 337 aa23.26■■□□□ 1.31
CHRNB1-206ENST00000574054 PLEKHA4Q9H4M7 779 aa23.26■■□□□ 1.31
CHRNB1-206ENST00000574054 PIDD1Q9HB75 910 aa23.26■■□□□ 1.31
CHRNB1-206ENST00000574054 C2orf16Q68DN1 1984 aa23.26■■□□□ 1.31
CHRNB1-206ENST00000574054 CACNA1HO95180 2353 aa23.26■■□□□ 1.31
CHRNB1-206ENST00000574054 HIP1RO75146 1068 aa23.25■■□□□ 1.31
CHRNB1-206ENST00000574054 GBP2P32456 591 aaPredicted RBP23.25■■□□□ 1.31
CHRNB1-206ENST00000574054 PRPHP41219 470 aa23.25■■□□□ 1.31
CHRNB1-206ENST00000574054 PEX3P56589 373 aa23.25■■□□□ 1.31
CHRNB1-206ENST00000574054 IL17AQ16552 155 aa23.25■■□□□ 1.31
CHRNB1-206ENST00000574054 FAM171A1Q5VUB5 890 aa23.25■■□□□ 1.31
CHRNB1-206ENST00000574054 CYP26C1Q6V0L0 522 aa23.25■■□□□ 1.31
CHRNB1-206ENST00000574054 HDAC7Q8WUI4 952 aa23.25■■□□□ 1.31
CHRNB1-206ENST00000574054 STAMQ92783 540 aa23.25■■□□□ 1.31
CHRNB1-206ENST00000574054 TTPALQ9BTX7 342 aa23.25■■□□□ 1.31
CHRNB1-206ENST00000574054 MFSD1Q9H3U5 465 aa23.25■■□□□ 1.31
CHRNB1-206ENST00000574054 WDR6Q9NNW5 1121 aaKnown RBP23.25■■□□□ 1.31
CHRNB1-206ENST00000574054 KMT2EQ8IZD2 1858 aa23.25■■□□□ 1.31
CHRNB1-206ENST00000574054 CLUHO75153 1309 aa23.25■■□□□ 1.31
CHRNB1-206ENST00000574054 NPTX2P47972 431 aa23.24■■□□□ 1.31
CHRNB1-206ENST00000574054 TCF15Q12870 199 aa23.24■■□□□ 1.31
CHRNB1-206ENST00000574054 DMP1Q13316 513 aaPredicted RBP23.24■■□□□ 1.31
CHRNB1-206ENST00000574054 GLRA4Q5JXX5 417 aa23.24■■□□□ 1.31
CHRNB1-206ENST00000574054 ZNF707Q96C28 371 aaPredicted RBP23.24■■□□□ 1.31
CHRNB1-206ENST00000574054 RUSC1Q9BVN2 902 aa23.24■■□□□ 1.31
CHRNB1-206ENST00000574054 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.24■■□□□ 1.31
CHRNB1-206ENST00000574054 TDGQ13569 410 aa23.23■■□□□ 1.31
CHRNB1-206ENST00000574054 NAB2Q15742 525 aa23.23■■□□□ 1.31
CHRNB1-206ENST00000574054 PSMD5Q16401 504 aa23.23■■□□□ 1.31
CHRNB1-206ENST00000574054 TMX3Q96JJ7 454 aa23.23■■□□□ 1.31
CHRNB1-206ENST00000574054 PHOX2BQ99453 314 aa23.23■■□□□ 1.31
CHRNB1-206ENST00000574054 MMTAG2Q9BU76 263 aaKnown RBP23.23■■□□□ 1.31
CHRNB1-206ENST00000574054 NT5C3AQ9H0P0 336 aa23.23■■□□□ 1.31
CHRNB1-206ENST00000574054 KCNK12Q9HB15 430 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms