RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 USP20Q9Y2K6 914 aa12.05□□□□□ -0.48
RPAIN-212ENST00000573126 CAPN7Q9Y6W3 813 aa12.05□□□□□ -0.48
RPAIN-212ENST00000573126 HNRNPDLO14979 420 aaKnown RBP12.04□□□□□ -0.48
RPAIN-212ENST00000573126 MAPK13O15264 365 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 ZNF862O60290 1169 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 JAK3P52333 1124 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 EIF3BP55884 814 aaKnown RBP12.04□□□□□ -0.48
RPAIN-212ENST00000573126 CLUL1Q15846 466 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 LMBRD2Q68DH5 695 aaPredicted RBP12.04□□□□□ -0.48
RPAIN-212ENST00000573126 SLC13A5Q86YT5 568 aaPredicted RBP12.04□□□□□ -0.48
RPAIN-212ENST00000573126 RAPGEF5Q92565 580 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 TRIM7Q9C029 511 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 KIAA1683Q9H0B3 1180 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 WNT8AQ9H1J5 351 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 TMEM8AQ9HCN3 771 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 MYOZ2Q9NPC6 264 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 GABBR1Q9UBS5 961 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 PCYOX1Q9UHG3 505 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 CLDN3O15551 220 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 RARAP10276 462 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 SLCO1A2P46721 670 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 GPC3P51654 580 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 KRT76Q01546 638 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 CDR2Q01850 454 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 MAP3K10Q02779 954 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 BAATQ14032 418 aaPredicted RBP12.04□□□□□ -0.48
RPAIN-212ENST00000573126 TCEAL1Q15170 157 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 MICALCLQ6ZW33 695 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 AGBL3Q8NEM8 1001 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 ATG4CQ96DT6 458 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 RPAP3Q9H6T3 665 aaPredicted RBP12.04□□□□□ -0.48
RPAIN-212ENST00000573126 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.04□□□□□ -0.48
RPAIN-212ENST00000573126 GTF3C4Q9UKN8 822 aa12.04□□□□□ -0.48
RPAIN-212ENST00000573126 CYP1A2P05177 515 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 DPEP1P16444 411 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 HSPA6P17066 643 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 DRG2P55039 364 aaKnown RBP12.03□□□□□ -0.48
RPAIN-212ENST00000573126 GHRHRQ02643 423 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 EN1Q05925 392 aaPredicted RBP12.03□□□□□ -0.48
RPAIN-212ENST00000573126 LLGL2Q6P1M3 1020 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 NLRX1Q86UT6 975 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 HOOK3Q86VS8 718 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 CCDC25Q86WR0 208 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 DDX1Q92499 740 aaKnown RBP12.03□□□□□ -0.48
RPAIN-212ENST00000573126 FAM213AQ9BRX8 229 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 DDX20Q9UHI6 824 aaKnown RBP12.03□□□□□ -0.48
RPAIN-212ENST00000573126 PCDHA3Q9Y5H8 950 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 H0YHG0 523 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 PMM2O15305 246 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 GRIN3BO60391 1043 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 MTA2O94776 668 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 NUDT17P0C025 328 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 SFNP31947 248 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 COILP38432 576 aaPredicted RBP12.03□□□□□ -0.48
RPAIN-212ENST00000573126 RWDD2BP57060 319 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 SNRPFP62306 86 aaKnown RBP12.03□□□□□ -0.48
RPAIN-212ENST00000573126 CYP24A1Q07973 514 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 SF3A3Q12874 501 aaKnown RBP eCLIP12.03□□□□□ -0.48
RPAIN-212ENST00000573126 DAB2IPQ5VWQ8 1189 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 SPATS2Q86XZ4 545 aaKnown RBP12.03□□□□□ -0.48
RPAIN-212ENST00000573126 MTMR14Q8NCE2 650 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 C1orf54Q8WWF1 131 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 TLCD1Q96CP7 247 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 BICD1Q96G01 975 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 TEPSINQ96N21 525 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 TIPINQ9BVW5 301 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 MOV10L1Q9BXT6 1211 aaKnown RBP12.03□□□□□ -0.48
RPAIN-212ENST00000573126 ANKEF1Q9NU02 776 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 ANAPC7Q9UJX3 599 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 MTUS1Q9ULD2 1270 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 COQ4Q9Y3A0 265 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 PCDHA10Q9Y5I2 948 aa12.03□□□□□ -0.48
RPAIN-212ENST00000573126 PODXLO00592 558 aa12.02□□□□□ -0.48
RPAIN-212ENST00000573126 IFI35P80217 286 aaPredicted RBP12.02□□□□□ -0.48
RPAIN-212ENST00000573126 SNX1Q13596 522 aa12.02□□□□□ -0.48
RPAIN-212ENST00000573126 SIX1Q15475 284 aaPredicted RBP12.02□□□□□ -0.48
RPAIN-212ENST00000573126 EPS8L3Q8TE67 593 aaKnown RBP12.02□□□□□ -0.48
RPAIN-212ENST00000573126 ZBED3Q96IU2 234 aaPredicted RBP12.02□□□□□ -0.48
RPAIN-212ENST00000573126 SELENOSQ9BQE4 189 aa12.02□□□□□ -0.48
RPAIN-212ENST00000573126 PAGR1Q9BTK6 254 aa12.02□□□□□ -0.48
RPAIN-212ENST00000573126 AZI2Q9H6S1 392 aa12.02□□□□□ -0.48
RPAIN-212ENST00000573126 RNF146Q9NTX7 359 aa12.02□□□□□ -0.48
RPAIN-212ENST00000573126 MTRF1LQ9UGC7 380 aaKnown RBP12.02□□□□□ -0.48
RPAIN-212ENST00000573126 VWA5AO00534 786 aa12.02□□□□□ -0.49
RPAIN-212ENST00000573126 CTNND1O60716 968 aaKnown RBP12.02□□□□□ -0.49
RPAIN-212ENST00000573126 NR3C2P08235 984 aa12.02□□□□□ -0.49
RPAIN-212ENST00000573126 SPDYCQ5MJ68 293 aa12.02□□□□□ -0.49
RPAIN-212ENST00000573126 SWSAP1Q6NVH7 229 aa12.02□□□□□ -0.49
RPAIN-212ENST00000573126 CPA5Q8WXQ8 436 aa12.02□□□□□ -0.49
RPAIN-212ENST00000573126 ATG4AQ8WYN0 398 aa12.02□□□□□ -0.49
RPAIN-212ENST00000573126 UVRAGQ9P2Y5 699 aa12.02□□□□□ -0.49
RPAIN-212ENST00000573126 LOXHD1Q8IVV2 1947 aa12.02□□□□□ -0.49
RPAIN-212ENST00000573126 ATXN2Q99700 1313 aaKnown RBP12.02□□□□□ -0.49
RPAIN-212ENST00000573126 SRRM3A6NNA2 597 aaPredicted RBP12.02□□□□□ -0.49
RPAIN-212ENST00000573126 RGS16O15492 202 aaPredicted RBP12.02□□□□□ -0.49
RPAIN-212ENST00000573126 ZBED4O75132 1171 aa12.02□□□□□ -0.49
RPAIN-212ENST00000573126 GGPS1O95749 300 aa12.02□□□□□ -0.49
RPAIN-212ENST00000573126 KCNA3P22001 575 aa12.02□□□□□ -0.49
RPAIN-212ENST00000573126 BYSLQ13895 437 aaKnown RBP12.02□□□□□ -0.49
RPAIN-212ENST00000573126 PPP1R7Q15435 360 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 230.4 ms