RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 CPLX3Q8WVH0 158 aa10.63□□□□□ -0.71
CIITA-208ENST00000572665 KAT2BQ92831 832 aa10.63□□□□□ -0.71
CIITA-208ENST00000572665 RRP36Q96EU6 259 aaKnown RBP10.63□□□□□ -0.71
CIITA-208ENST00000572665 ACTL7BQ9Y614 415 aa10.63□□□□□ -0.71
CIITA-208ENST00000572665 CUL9Q8IWT3 2517 aa10.63□□□□□ -0.71
CIITA-208ENST00000572665 KAT6AQ92794 2004 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 E7EWF7 191 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 RNF225M0QZC1 329 aaPredicted RBP10.62□□□□□ -0.71
CIITA-208ENST00000572665 CAND2O75155 1236 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 DDAH1O94760 285 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 CXCL10P02778 98 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 ZNF286BP0CG31 522 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 CALM1P0DP23 149 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 CALM2P0DP24 149 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 CALM3P0DP25 149 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 IMPDH2P12268 514 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 MYOGP15173 224 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 CHMLP26374 656 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 HOXA13P31271 388 aaPredicted RBP10.62□□□□□ -0.71
CIITA-208ENST00000572665 WDR5P61964 334 aaKnown RBP10.62□□□□□ -0.71
CIITA-208ENST00000572665 NLRX1Q86UT6 975 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 SMARCC2Q8TAQ2 1214 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 ARNTL2Q8WYA1 636 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 VWCEQ96DN2 955 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 SHDQ96IW2 340 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 CDHR1Q96JP9 859 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 PIGSQ96S52 555 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 UHRF1Q96T88 793 aaPredicted RBP10.62□□□□□ -0.71
CIITA-208ENST00000572665 RAD9AQ99638 391 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 LMCD1Q9NZU5 365 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 REV1Q9UBZ9 1251 aa10.62□□□□□ -0.71
CIITA-208ENST00000572665 ZNF215Q9UL58 517 aaPredicted RBP10.62□□□□□ -0.71
CIITA-208ENST00000572665 TET1Q8NFU7 2136 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 C17orf102A2RUQ5 167 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 CCDC69A6NI79 296 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 SGSM2O43147 1006 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 FIBPO43427 364 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 AMHP03971 560 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 GSPT1P15170 499 aaKnown RBP10.61□□□□□ -0.71
CIITA-208ENST00000572665 PLCG1P19174 1290 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 UBA1P22314 1058 aaKnown RBP10.61□□□□□ -0.71
CIITA-208ENST00000572665 ICAM3P32942 547 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 ETF1P62495 437 aaKnown RBP10.61□□□□□ -0.71
CIITA-208ENST00000572665 TAP1Q03518 808 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 TROAPQ12815 778 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 HSDL1Q3SXM5 330 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 FBXW10Q5XX13 1052 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 NFXL1Q6ZNB6 911 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 PPP1R13LQ8WUF5 828 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 ATP6V0A1Q93050 837 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 TMEM87BQ96K49 555 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 SPZ1Q9BXG8 430 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 STK17AQ9UEE5 414 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 ADAM30Q9UKF2 790 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 INSL6Q9Y581 213 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 MTCH2Q9Y6C9 303 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 A0A0C4DFX4 3053 aa10.61□□□□□ -0.71
CIITA-208ENST00000572665 BAZ2BQ9UIF8 2168 aaKnown RBP10.6□□□□□ -0.71
CIITA-208ENST00000572665 RSPH10B2B2RC85 870 aa10.6□□□□□ -0.71
CIITA-208ENST00000572665 PPP1R11O60927 126 aaPredicted RBP10.6□□□□□ -0.71
CIITA-208ENST00000572665 STK10O94804 968 aaKnown RBP10.6□□□□□ -0.71
CIITA-208ENST00000572665 GJB5O95377 273 aa10.6□□□□□ -0.71
CIITA-208ENST00000572665 RPLP2P05387 115 aaKnown RBP10.6□□□□□ -0.71
CIITA-208ENST00000572665 PGRP06401 933 aa10.6□□□□□ -0.71
CIITA-208ENST00000572665 RSPH10BP0C881 870 aa10.6□□□□□ -0.71
CIITA-208ENST00000572665 MCM5P33992 734 aa10.6□□□□□ -0.71
CIITA-208ENST00000572665 THPOP40225 353 aa10.6□□□□□ -0.71
CIITA-208ENST00000572665 ASPAP45381 313 aa10.6□□□□□ -0.71
CIITA-208ENST00000572665 GIPRP48546 466 aa10.6□□□□□ -0.71
CIITA-208ENST00000572665 PTH1RQ03431 593 aa10.6□□□□□ -0.71
CIITA-208ENST00000572665 TMEM201Q5SNT2 666 aa10.6□□□□□ -0.71
CIITA-208ENST00000572665 METTL7BQ6UX53 244 aa10.6□□□□□ -0.71
CIITA-208ENST00000572665 SERINC5Q86VE9 423 aa10.6□□□□□ -0.71
CIITA-208ENST00000572665 RBBP8NLQ8NC74 664 aaPredicted RBP10.6□□□□□ -0.71
CIITA-208ENST00000572665 MAP4K1Q92918 833 aa10.6□□□□□ -0.71
CIITA-208ENST00000572665 TNPO1Q92973 898 aaKnown RBP10.6□□□□□ -0.71
CIITA-208ENST00000572665 ANAPC16Q96DE5 110 aa10.6□□□□□ -0.71
CIITA-208ENST00000572665 FAM46AQ96IP4 442 aaKnown RBP10.6□□□□□ -0.71
CIITA-208ENST00000572665 SAMD11Q96NU1 681 aa10.6□□□□□ -0.71
CIITA-208ENST00000572665 TGS1Q96RS0 853 aaKnown RBP10.6□□□□□ -0.71
CIITA-208ENST00000572665 UBL7Q96S82 380 aaPredicted RBP10.6□□□□□ -0.71
CIITA-208ENST00000572665 SENP7Q9BQF6 1050 aa10.6□□□□□ -0.71
CIITA-208ENST00000572665 C16orf70Q9BSU1 422 aa10.6□□□□□ -0.71
CIITA-208ENST00000572665 CERS4Q9HA82 394 aa10.6□□□□□ -0.71
CIITA-208ENST00000572665 FAM105AQ9NUU6 356 aa10.6□□□□□ -0.71
CIITA-208ENST00000572665 CDH23Q9H251 3354 aa10.6□□□□□ -0.71
CIITA-208ENST00000572665 FRMPD4Q14CM0 1322 aa10.59□□□□□ -0.71
CIITA-208ENST00000572665 SIP14410 1827 aa10.59□□□□□ -0.71
CIITA-208ENST00000572665 PTPRSQ13332 1948 aa10.59□□□□□ -0.71
CIITA-208ENST00000572665 MICAL3Q7RTP6 2002 aa10.59□□□□□ -0.71
CIITA-208ENST00000572665 KRBA1A5PL33 1030 aa10.59□□□□□ -0.71
CIITA-208ENST00000572665 SART1O43290 800 aaKnown RBP10.59□□□□□ -0.71
CIITA-208ENST00000572665 CYTH3O43739 400 aa10.59□□□□□ -0.71
CIITA-208ENST00000572665 NBNO60934 754 aa10.59□□□□□ -0.71
CIITA-208ENST00000572665 LGALS2P05162 132 aa10.59□□□□□ -0.71
CIITA-208ENST00000572665 ETFBP38117 255 aa10.59□□□□□ -0.71
CIITA-208ENST00000572665 ZNF618Q5T7W0 954 aa10.59□□□□□ -0.71
CIITA-208ENST00000572665 SYNE3Q6ZMZ3 975 aa10.59□□□□□ -0.71
CIITA-208ENST00000572665 TEX2Q8IWB9 1127 aa10.59□□□□□ -0.71
CIITA-208ENST00000572665 IGDCC4Q8TDY8 1250 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms