RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 FBXO2Q9UK22 296 aaPredicted RBP19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 RBM19Q9Y4C8 960 aaKnown RBP19.54■□□□□ 0.72
CTDNEP1-207ENST00000572043 MYO7AQ13402 2215 aa19.53■□□□□ 0.72
CTDNEP1-207ENST00000572043 SOD2P04179 222 aa19.53■□□□□ 0.72
CTDNEP1-207ENST00000572043 KRT18P05783 430 aaKnown RBP19.53■□□□□ 0.72
CTDNEP1-207ENST00000572043 URODP06132 367 aa19.53■□□□□ 0.72
CTDNEP1-207ENST00000572043 EPCAMP16422 314 aa19.53■□□□□ 0.72
CTDNEP1-207ENST00000572043 KLRC2P26717 231 aa19.53■□□□□ 0.72
CTDNEP1-207ENST00000572043 GIT2Q14161 759 aa19.53■□□□□ 0.72
CTDNEP1-207ENST00000572043 KANK3Q6NY19 840 aa19.53■□□□□ 0.72
CTDNEP1-207ENST00000572043 KCTD17Q8N5Z5 321 aa19.53■□□□□ 0.72
CTDNEP1-207ENST00000572043 C12orf76Q8N812 135 aaPredicted RBP19.53■□□□□ 0.72
CTDNEP1-207ENST00000572043 RAD54LQ92698 747 aa19.53■□□□□ 0.72
CTDNEP1-207ENST00000572043 KLHL5Q96PQ7 755 aa19.53■□□□□ 0.72
CTDNEP1-207ENST00000572043 REEP2Q9BRK0 252 aa19.53■□□□□ 0.72
CTDNEP1-207ENST00000572043 HERC2P3Q9BVR0 1158 aa19.53■□□□□ 0.72
CTDNEP1-207ENST00000572043 CDT1Q9H211 546 aa19.53■□□□□ 0.72
CTDNEP1-207ENST00000572043 S1PR5Q9H228 398 aa19.53■□□□□ 0.72
CTDNEP1-207ENST00000572043 MRPL17Q9NRX2 175 aaKnown RBP19.53■□□□□ 0.72
CTDNEP1-207ENST00000572043 SLC26A4O43511 780 aa19.52■□□□□ 0.72
CTDNEP1-207ENST00000572043 TADA2AO75478 443 aa19.52■□□□□ 0.72
CTDNEP1-207ENST00000572043 THP07101 528 aa19.52■□□□□ 0.72
CTDNEP1-207ENST00000572043 CNPP09543 421 aaKnown RBP19.52■□□□□ 0.72
CTDNEP1-207ENST00000572043 MYBP10242 640 aa19.52■□□□□ 0.72
CTDNEP1-207ENST00000572043 SP100P23497 879 aaPredicted RBP19.52■□□□□ 0.72
CTDNEP1-207ENST00000572043 SMTNP53814 917 aa19.52■□□□□ 0.72
CTDNEP1-207ENST00000572043 STRN3Q13033 797 aa19.52■□□□□ 0.72
CTDNEP1-207ENST00000572043 TUSC3Q13454 348 aa19.52■□□□□ 0.72
CTDNEP1-207ENST00000572043 KIAA1841Q6NSI8 718 aa19.52■□□□□ 0.72
CTDNEP1-207ENST00000572043 FUT10Q6P4F1 479 aa19.52■□□□□ 0.72
CTDNEP1-207ENST00000572043 APBB1IPQ7Z5R6 666 aaPredicted RBP19.52■□□□□ 0.72
CTDNEP1-207ENST00000572043 TMEM161BQ8NDZ6 487 aa19.52■□□□□ 0.72
CTDNEP1-207ENST00000572043 SPIRE2Q8WWL2 714 aa19.52■□□□□ 0.72
CTDNEP1-207ENST00000572043 RPGRIP1Q96KN7 1286 aa19.52■□□□□ 0.72
CTDNEP1-207ENST00000572043 EMILIN2Q9BXX0 1053 aa19.52■□□□□ 0.72
CTDNEP1-207ENST00000572043 KCND2Q9NZV8 630 aa19.52■□□□□ 0.72
CTDNEP1-207ENST00000572043 ANKFY1Q9P2R3 1169 aa19.52■□□□□ 0.72
CTDNEP1-207ENST00000572043 IRAK3Q9Y616 596 aa19.52■□□□□ 0.72
CTDNEP1-207ENST00000572043 C19orf67A6NJJ6 358 aa19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 SPDYE4A6NLX3 237 aa19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 FAM13AO94988 1023 aa19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 WEE2P0C1S8 567 aa19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 MAPTP10636 758 aaKnown RBP19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 GLUD2P49448 558 aa19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 HSP90AA2PQ14568 343 aaPredicted RBP19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 FOXD4L6Q3SYB3 417 aaPredicted RBP19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 RARS2Q5T160 578 aaKnown RBP19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 FOXD4L3Q6VB84 417 aaPredicted RBP19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 MYCT1Q8N699 235 aa19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 ZBTB45Q96K62 511 aaPredicted RBP19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 POP1Q99575 1024 aaKnown RBP19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 NTPCRQ9BSD7 190 aaKnown RBP19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 GPR62Q9BZJ7 368 aa19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 CCSER1Q9C0I3 900 aa19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 ZSCAN16Q9H4T2 348 aaPredicted RBP19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 PTPRHQ9HD43 1115 aa19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 LARSQ9P2J5 1176 aaKnown RBP19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 STK39Q9UEW8 545 aa19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 ADAM28Q9UKQ2 775 aa19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 SRPRBQ9Y5M8 271 aaKnown RBP19.51■□□□□ 0.71
CTDNEP1-207ENST00000572043 ZMYM2Q9UBW7 1377 aa19.5■□□□□ 0.71
CTDNEP1-207ENST00000572043 FAM86C2PA6NEL3 165 aa19.5■□□□□ 0.71
CTDNEP1-207ENST00000572043 LILRB3O75022 631 aa19.5■□□□□ 0.71
CTDNEP1-207ENST00000572043 KIF4AO95239 1232 aa19.5■□□□□ 0.71
CTDNEP1-207ENST00000572043 YARSP54577 528 aaKnown RBP19.5■□□□□ 0.71
CTDNEP1-207ENST00000572043 TPRNQ4KMQ1 711 aa19.5■□□□□ 0.71
CTDNEP1-207ENST00000572043 SEZ6Q53EL9 994 aa19.5■□□□□ 0.71
CTDNEP1-207ENST00000572043 SLC22A17Q8WUG5 538 aa19.5■□□□□ 0.71
CTDNEP1-207ENST00000572043 SUSD6Q92537 303 aa19.5■□□□□ 0.71
CTDNEP1-207ENST00000572043 LARP4BQ92615 738 aaKnown RBP19.5■□□□□ 0.71
CTDNEP1-207ENST00000572043 CCDC94Q9BW85 323 aaPredicted RBP19.5■□□□□ 0.71
CTDNEP1-207ENST00000572043 CCDC39Q9UFE4 941 aa19.5■□□□□ 0.71
CTDNEP1-207ENST00000572043 K7ENM7 598 aa19.49■□□□□ 0.71
CTDNEP1-207ENST00000572043 HOXB8P17481 243 aaPredicted RBP19.49■□□□□ 0.71
CTDNEP1-207ENST00000572043 GRM5P41594 1212 aa19.49■□□□□ 0.71
CTDNEP1-207ENST00000572043 MATR3P43243 847 aaKnown RBP eCLIP19.49■□□□□ 0.71
CTDNEP1-207ENST00000572043 CBX2Q14781 532 aaPredicted RBP19.49■□□□□ 0.71
CTDNEP1-207ENST00000572043 MPZL3Q6UWV2 235 aa19.49■□□□□ 0.71
CTDNEP1-207ENST00000572043 GLYCTKQ8IVS8 523 aa19.49■□□□□ 0.71
CTDNEP1-207ENST00000572043 RNF168Q8IYW5 571 aaPredicted RBP19.49■□□□□ 0.71
CTDNEP1-207ENST00000572043 FEZF2Q8TBJ5 459 aa19.49■□□□□ 0.71
CTDNEP1-207ENST00000572043 BICD1Q96G01 975 aa19.49■□□□□ 0.71
CTDNEP1-207ENST00000572043 PHF7Q9BWX1 381 aaPredicted RBP19.49■□□□□ 0.71
CTDNEP1-207ENST00000572043 PANK2Q9BZ23 570 aa19.49■□□□□ 0.71
CTDNEP1-207ENST00000572043 GOLGA2P5Q9HBQ8 144 aa19.49■□□□□ 0.71
CTDNEP1-207ENST00000572043 TFIP11Q9UBB9 837 aaKnown RBP19.49■□□□□ 0.71
CTDNEP1-207ENST00000572043 KCNG1Q9UIX4 513 aa19.49■□□□□ 0.71
CTDNEP1-207ENST00000572043 ODF2LQ9ULJ1 636 aa19.49■□□□□ 0.71
CTDNEP1-207ENST00000572043 PI4K2BG5E9Z4 385 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 ABLIM1O14639 778 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 TEX28O15482 410 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 TBCAO75347 108 aaKnown RBP19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 EFEMP2O95967 443 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 MCF2P10911 925 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 PROZP22891 400 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 DDIT3P35638 169 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 TXLNAP40222 546 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 CLCN4P51793 760 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 NCKAP1LP55160 1127 aa19.48■□□□□ 0.71
CTDNEP1-207ENST00000572043 DSG1Q02413 1049 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms