RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 DNAJC3Q13217 504 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 TBC1D25Q3MII6 688 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 CBWD6Q4V339 395 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 CBWD3Q5JTY5 395 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 CBWD5Q5RIA9 395 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 LRRC8CQ8TDW0 803 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 C10orf82Q8WW14 230 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 SCOCQ9UIL1 159 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 ATF5Q9Y2D1 282 aaPredicted RBP17.97■□□□□ 0.47
LITAF-209ENST00000571688 ZMYM2Q9UBW7 1377 aa17.97■□□□□ 0.47
LITAF-209ENST00000571688 UBAP1LF5GYI3 381 aa17.96■□□□□ 0.47
LITAF-209ENST00000571688 NFIL3Q16649 462 aa17.96■□□□□ 0.47
LITAF-209ENST00000571688 ARHGAP44Q17R89 818 aa17.96■□□□□ 0.47
LITAF-209ENST00000571688 BICDL1Q6ZP65 573 aa17.96■□□□□ 0.47
LITAF-209ENST00000571688 TXNRD3Q86VQ6 643 aa17.96■□□□□ 0.47
LITAF-209ENST00000571688 EPAS1Q99814 870 aa17.96■□□□□ 0.47
LITAF-209ENST00000571688 DNAJC17Q9NVM6 304 aaKnown RBP17.96■□□□□ 0.47
LITAF-209ENST00000571688 IRAK4Q9NWZ3 460 aa17.96■□□□□ 0.47
LITAF-209ENST00000571688 ASIC3Q9UHC3 531 aa17.96■□□□□ 0.47
LITAF-209ENST00000571688 LNPEPQ9UIQ6 1025 aa17.96■□□□□ 0.47
LITAF-209ENST00000571688 MYH14Q7Z406 1995 aaKnown RBP17.96■□□□□ 0.47
LITAF-209ENST00000571688 MARK3P27448 753 aa17.96■□□□□ 0.47
LITAF-209ENST00000571688 OCRLQ01968 901 aa17.96■□□□□ 0.47
LITAF-209ENST00000571688 SPIRE1Q08AE8 756 aa17.96■□□□□ 0.47
LITAF-209ENST00000571688 C4orf50Q6ZRC1 276 aa17.96■□□□□ 0.47
LITAF-209ENST00000571688 EZH1Q92800 747 aaPredicted RBP17.96■□□□□ 0.47
LITAF-209ENST00000571688 FAM210AQ96ND0 272 aa17.96■□□□□ 0.47
LITAF-209ENST00000571688 RUSC1Q9BVN2 902 aa17.96■□□□□ 0.47
LITAF-209ENST00000571688 BCAS3Q9H6U6 928 aa17.96■□□□□ 0.47
LITAF-209ENST00000571688 JMJD4Q9H9V9 463 aa17.96■□□□□ 0.47
LITAF-209ENST00000571688 DNM3Q9UQ16 869 aa17.96■□□□□ 0.47
LITAF-209ENST00000571688 FOXN3O00409 490 aaPredicted RBP17.95■□□□□ 0.46
LITAF-209ENST00000571688 MEIS1O00470 390 aa17.95■□□□□ 0.46
LITAF-209ENST00000571688 EDF1O60869 148 aaKnown RBP17.95■□□□□ 0.46
LITAF-209ENST00000571688 SNHG28P0DPA3 235 aa17.95■□□□□ 0.46
LITAF-209ENST00000571688 DLATP10515 647 aaKnown RBP17.95■□□□□ 0.46
LITAF-209ENST00000571688 MUTP22033 750 aa17.95■□□□□ 0.46
LITAF-209ENST00000571688 ITGA8P53708 1063 aa17.95■□□□□ 0.46
LITAF-209ENST00000571688 CUL3Q13618 768 aa17.95■□□□□ 0.46
LITAF-209ENST00000571688 PTK6Q13882 451 aa17.95■□□□□ 0.46
LITAF-209ENST00000571688 CPNE8Q86YQ8 564 aa17.95■□□□□ 0.46
LITAF-209ENST00000571688 DENND1AQ8TEH3 1009 aa17.95■□□□□ 0.46
LITAF-209ENST00000571688 SPOCK2Q92563 424 aa17.95■□□□□ 0.46
LITAF-209ENST00000571688 MKNK1Q9BUB5 465 aa17.95■□□□□ 0.46
LITAF-209ENST00000571688 SLCO1B3Q9NPD5 702 aa17.95■□□□□ 0.46
LITAF-209ENST00000571688 RASA4BC9J798 803 aa17.95■□□□□ 0.46
LITAF-209ENST00000571688 RASA4O43374 803 aa17.95■□□□□ 0.46
LITAF-209ENST00000571688 CAV1Q03135 178 aa17.95■□□□□ 0.46
LITAF-209ENST00000571688 RCN2Q14257 317 aa17.95■□□□□ 0.46
LITAF-209ENST00000571688 KHDC1Q4VXA5 237 aaKnown RBP17.95■□□□□ 0.46
LITAF-209ENST00000571688 MAML1Q92585 1016 aa17.95■□□□□ 0.46
LITAF-209ENST00000571688 FGD4Q96M96 766 aa17.95■□□□□ 0.46
LITAF-209ENST00000571688 PAIP2Q9BPZ3 127 aaKnown RBP17.95■□□□□ 0.46
LITAF-209ENST00000571688 TMX4Q9H1E5 349 aaPredicted RBP17.95■□□□□ 0.46
LITAF-209ENST00000571688 STRCP1A6NGW2 1772 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 IRS2Q9Y4H2 1338 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 FSCN2O14926 492 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 LRRN2O75325 713 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 SPATA31C1P0DKV0 1188 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 GSTO1P78417 241 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 STAT4Q14765 748 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 PHLDB3Q6NSJ2 640 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 C1orf54Q8WWF1 131 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 MBOAT7Q96N66 472 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 TIPINQ9BVW5 301 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 IKZF4Q9H2S9 585 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 WNK3Q9BYP7 1800 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 SKIP12755 728 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 RFX1P22670 979 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 RPA1P27694 616 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 POLE2P56282 527 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 SGO2Q562F6 1265 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 SNX30Q5VWJ9 437 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 SYDE1Q6ZW31 735 aaPredicted RBP17.94■□□□□ 0.46
LITAF-209ENST00000571688 ARHGAP22Q7Z5H3 698 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 SLFN12Q8IYM2 578 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 RIBC1Q8N443 379 aaPredicted RBP17.94■□□□□ 0.46
LITAF-209ENST00000571688 B4GALNT2Q8NHY0 566 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 MIPEPQ99797 713 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 ANKRD2Q9GZV1 360 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 OLFML3Q9NRN5 406 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 PCMTD2Q9NV79 361 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 CHORDC1Q9UHD1 332 aaPredicted RBP17.94■□□□□ 0.46
LITAF-209ENST00000571688 ROBO1Q9Y6N7 1651 aa17.94■□□□□ 0.46
LITAF-209ENST00000571688 CYP3A7-CYP3A51PA0A087WV96 503 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 A0A1B0GVG6 124 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 SORBS3O60504 671 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 HNRNPCL1O60812 293 aaKnown RBP17.93■□□□□ 0.46
LITAF-209ENST00000571688 ATP9AO75110 1047 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 CYP3A7P24462 503 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 GRIK5Q16478 980 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 TAF1BQ53T94 588 aaPredicted RBP17.93■□□□□ 0.46
LITAF-209ENST00000571688 RFWD3Q6PCD5 774 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 ADGRF4Q8IZF3 695 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 NRG4Q8WWG1 115 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 TRAIPQ9BWF2 469 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 GPCPD1Q9NPB8 672 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 SAR1AQ9NR31 198 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 SMAPO00193 183 aa17.93■□□□□ 0.46
LITAF-209ENST00000571688 CLDN3O15551 220 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms