RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 RRP12Q5JTH9 1297 aaKnown RBP8.01□□□□□ -1.13
CDC27-212ENST00000570818 TRMT2AQ8IZ69 625 aaKnown RBP8.01□□□□□ -1.13
CDC27-212ENST00000570818 OR10H5Q8NGA6 315 aa8.01□□□□□ -1.13
CDC27-212ENST00000570818 CYFIP2Q96F07 1278 aa8.01□□□□□ -1.13
CDC27-212ENST00000570818 SLC2A4RGQ9NR83 387 aa8.01□□□□□ -1.13
CDC27-212ENST00000570818 TMEM140Q9NV12 185 aa8.01□□□□□ -1.13
CDC27-212ENST00000570818 DNM3Q9UQ16 869 aa8.01□□□□□ -1.13
CDC27-212ENST00000570818 MRFAP1Q9Y605 127 aa8.01□□□□□ -1.13
CDC27-212ENST00000570818 ADCY6O43306 1168 aa8□□□□□ -1.13
CDC27-212ENST00000570818 SPATA31D3P0C874 917 aa8□□□□□ -1.13
CDC27-212ENST00000570818 CLRN1P58418 232 aa8□□□□□ -1.13
CDC27-212ENST00000570818 SLC25A3Q00325 362 aa8□□□□□ -1.13
CDC27-212ENST00000570818 ITKQ08881 620 aa8□□□□□ -1.13
CDC27-212ENST00000570818 MGAT2Q10469 447 aa8□□□□□ -1.13
CDC27-212ENST00000570818 FHL2Q14192 279 aa8□□□□□ -1.13
CDC27-212ENST00000570818 MFSD14BQ5SR56 506 aa8□□□□□ -1.13
CDC27-212ENST00000570818 SYDE2Q5VT97 1194 aa8□□□□□ -1.13
CDC27-212ENST00000570818 SPATA31D4Q6ZUB0 917 aa8□□□□□ -1.13
CDC27-212ENST00000570818 Q6ZVL8 140 aa8□□□□□ -1.13
CDC27-212ENST00000570818 CLIP3Q96DZ5 547 aa8□□□□□ -1.13
CDC27-212ENST00000570818 SLC46A2Q9BY10 475 aa8□□□□□ -1.13
CDC27-212ENST00000570818 PCED1AQ9H1Q7 454 aa8□□□□□ -1.13
CDC27-212ENST00000570818 MANSC1Q9H8J5 431 aa8□□□□□ -1.13
CDC27-212ENST00000570818 DMRT3Q9NQL9 472 aa8□□□□□ -1.13
CDC27-212ENST00000570818 ZNF277Q9NRM2 450 aaPredicted RBP8□□□□□ -1.13
CDC27-212ENST00000570818 RPS6KA4O75676 772 aa7.99□□□□□ -1.13
CDC27-212ENST00000570818 SREBF1P36956 1147 aa7.99□□□□□ -1.13
CDC27-212ENST00000570818 HMGA2P52926 109 aa7.99□□□□□ -1.13
CDC27-212ENST00000570818 SLC16A1P53985 500 aa7.99□□□□□ -1.13
CDC27-212ENST00000570818 ATXN7L2Q5T6C5 722 aaPredicted RBP7.99□□□□□ -1.13
CDC27-212ENST00000570818 GDF7Q7Z4P5 450 aa7.99□□□□□ -1.13
CDC27-212ENST00000570818 AMER2Q8N7J2 671 aa7.99□□□□□ -1.13
CDC27-212ENST00000570818 NEU4Q8WWR8 484 aaPredicted RBP7.99□□□□□ -1.13
CDC27-212ENST00000570818 MTMR8Q96EF0 704 aa7.99□□□□□ -1.13
CDC27-212ENST00000570818 CEP95Q96GE4 821 aa7.99□□□□□ -1.13
CDC27-212ENST00000570818 REXO4Q9GZR2 422 aaKnown RBP7.99□□□□□ -1.13
CDC27-212ENST00000570818 TRPM5Q9NZQ8 1165 aa7.99□□□□□ -1.13
CDC27-212ENST00000570818 GAGE12BA1L429 117 aa7.98□□□□□ -1.13
CDC27-212ENST00000570818 GAGE12HA6NDE8 117 aa7.98□□□□□ -1.13
CDC27-212ENST00000570818 GRXCR1A8MXD5 290 aa7.98□□□□□ -1.13
CDC27-212ENST00000570818 ALOX15P16050 662 aaPredicted RBP7.98□□□□□ -1.13
CDC27-212ENST00000570818 IBSPP21815 317 aaPredicted RBP7.98□□□□□ -1.13
CDC27-212ENST00000570818 APOBEC3AP31941 199 aaPredicted RBP7.98□□□□□ -1.13
CDC27-212ENST00000570818 TGFB2P61812 414 aa7.98□□□□□ -1.13
CDC27-212ENST00000570818 MXRA7P84157 204 aa7.98□□□□□ -1.13
CDC27-212ENST00000570818 AMPD3Q01432 767 aa7.98□□□□□ -1.13
CDC27-212ENST00000570818 NHLH2Q02577 135 aa7.98□□□□□ -1.13
CDC27-212ENST00000570818 PPP3CAQ08209 521 aa7.98□□□□□ -1.13
CDC27-212ENST00000570818 ACAP2Q15057 778 aa7.98□□□□□ -1.13
CDC27-212ENST00000570818 FNDC7Q5VTL7 733 aa7.98□□□□□ -1.13
CDC27-212ENST00000570818 ANKS6Q68DC2 871 aa7.98□□□□□ -1.13
CDC27-212ENST00000570818 DRC7Q8IY82 874 aa7.98□□□□□ -1.13
CDC27-212ENST00000570818 C1orf162Q8NEQ5 155 aaPredicted RBP7.98□□□□□ -1.13
CDC27-212ENST00000570818 REPS2Q8NFH8 660 aa7.98□□□□□ -1.13
CDC27-212ENST00000570818 CASKIN2Q8WXE0 1202 aa7.98□□□□□ -1.13
CDC27-212ENST00000570818 LENG9Q96B70 501 aa7.98□□□□□ -1.13
CDC27-212ENST00000570818 C7orf25Q9BPX7 421 aa7.98□□□□□ -1.13
CDC27-212ENST00000570818 MRIQ9BWK5 157 aa7.98□□□□□ -1.13
CDC27-212ENST00000570818 TRIM8Q9BZR9 551 aa7.98□□□□□ -1.13
CDC27-212ENST00000570818 TRHDEQ9UKU6 1024 aa7.98□□□□□ -1.13
CDC27-212ENST00000570818 FZD1Q9UP38 647 aa7.98□□□□□ -1.13
CDC27-212ENST00000570818 SHTN1A0MZ66 631 aa7.97□□□□□ -1.13
CDC27-212ENST00000570818 KLHL33A6NCF5 533 aa7.97□□□□□ -1.13
CDC27-212ENST00000570818 RNASET2O00584 256 aaKnown RBP7.97□□□□□ -1.13
CDC27-212ENST00000570818 RAP2AP10114 183 aa7.97□□□□□ -1.13
CDC27-212ENST00000570818 MYBL2P10244 700 aa7.97□□□□□ -1.13
CDC27-212ENST00000570818 LAG3P18627 525 aa7.97□□□□□ -1.13
CDC27-212ENST00000570818 KLF10Q13118 480 aa7.97□□□□□ -1.13
CDC27-212ENST00000570818 ATP2B3Q16720 1220 aa7.97□□□□□ -1.13
CDC27-212ENST00000570818 TIGD2Q4W5G0 525 aa7.97□□□□□ -1.13
CDC27-212ENST00000570818 LY6G5CQ5SRR4 150 aa7.97□□□□□ -1.13
CDC27-212ENST00000570818 IGFL4Q6B9Z1 124 aa7.97□□□□□ -1.13
CDC27-212ENST00000570818 PLXDC1Q8IUK5 500 aa7.97□□□□□ -1.13
CDC27-212ENST00000570818 PRPF38AQ8NAV1 312 aaKnown RBP7.97□□□□□ -1.13
CDC27-212ENST00000570818 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.97□□□□□ -1.13
CDC27-212ENST00000570818 PRRX2Q99811 253 aa7.97□□□□□ -1.13
CDC27-212ENST00000570818 COL4A3BPQ9Y5P4 624 aa7.97□□□□□ -1.13
CDC27-212ENST00000570818 CXorf49A8MYA2 514 aaPredicted RBP7.96□□□□□ -1.14
CDC27-212ENST00000570818 XPOTO43592 962 aaKnown RBP7.96□□□□□ -1.14
CDC27-212ENST00000570818 MT-CO1P00395 513 aa7.96□□□□□ -1.14
CDC27-212ENST00000570818 ITGB1P05556 798 aa7.96□□□□□ -1.14
CDC27-212ENST00000570818 HLA-DOAP06340 250 aa7.96□□□□□ -1.14
CDC27-212ENST00000570818 ATP5JP18859 108 aa7.96□□□□□ -1.14
CDC27-212ENST00000570818 IARSP41252 1262 aaKnown RBP7.96□□□□□ -1.14
CDC27-212ENST00000570818 CDKN1CP49918 316 aaPredicted RBP7.96□□□□□ -1.14
CDC27-212ENST00000570818 FAM50AQ14320 339 aaKnown RBP7.96□□□□□ -1.14
CDC27-212ENST00000570818 INAVAQ3KP66 663 aa7.96□□□□□ -1.14
CDC27-212ENST00000570818 AFMIDQ63HM1 303 aa7.96□□□□□ -1.14
CDC27-212ENST00000570818 PPM1NQ8N819 430 aa7.96□□□□□ -1.14
CDC27-212ENST00000570818 RNF169Q8NCN4 708 aa7.96□□□□□ -1.14
CDC27-212ENST00000570818 HOXB13Q92826 284 aaPredicted RBP7.96□□□□□ -1.14
CDC27-212ENST00000570818 FAXDC2Q96IV6 333 aa7.96□□□□□ -1.14
CDC27-212ENST00000570818 SLC2A13Q96QE2 648 aa7.96□□□□□ -1.14
CDC27-212ENST00000570818 GPRC5BQ9NZH0 403 aa7.96□□□□□ -1.14
CDC27-212ENST00000570818 AJAP1Q9UKB5 411 aaPredicted RBP7.96□□□□□ -1.14
CDC27-212ENST00000570818 ABHD16AO95870 558 aa7.95□□□□□ -1.14
CDC27-212ENST00000570818 SLPIP03973 132 aa7.95□□□□□ -1.14
CDC27-212ENST00000570818 GUCY1A2P33402 732 aa7.95□□□□□ -1.14
CDC27-212ENST00000570818 RNASE9P60153 205 aaKnown RBP7.95□□□□□ -1.14
CDC27-212ENST00000570818 KRT85P78386 507 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms