RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 OTOP3Q7RTS5 596 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 GPR155Q7Z3F1 870 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 PPP1R42Q7Z4L9 355 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 CXorf67Q86X51 503 aaPredicted RBP3.77□□□□□ -1.81
CNOT1-221ENST00000569924 CPNE8Q86YQ8 564 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 SIRT2Q8IXJ6 389 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 TOP6BLQ8N6T0 577 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 GPATCH11Q8N954 259 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 SUPT20HQ8NEM7 779 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 FBLIM1Q8WUP2 373 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 LRTOMTQ8WZ04 291 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 PHKBQ93100 1093 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 EAF2Q96CJ1 260 aaPredicted RBP3.77□□□□□ -1.81
CNOT1-221ENST00000569924 GCC1Q96CN9 775 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 RAX2Q96IS3 184 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 C16orf92Q96LL3 132 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 PLCD4Q9BRC7 762 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 LRFN3Q9BTN0 628 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 DUSP23Q9BVJ7 150 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 YIPF2Q9BWQ6 316 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 ANO3Q9BYT9 981 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 MYLK2Q9H1R3 596 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 VPS11Q9H270 941 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 DMRT3Q9NQL9 472 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 ADARB2Q9NS39 739 aaKnown RBP3.77□□□□□ -1.81
CNOT1-221ENST00000569924 GPRC5DQ9NZD1 345 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 MSRAQ9UJ68 235 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 FBXO2Q9UK22 296 aaPredicted RBP3.77□□□□□ -1.81
CNOT1-221ENST00000569924 ATP6V0A2Q9Y487 856 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 DLG5Q8TDM6 1919 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 PDE4DIPQ5VU43 2346 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 A0A0U1RQG5 324 aaPredicted RBP3.76□□□□□ -1.81
CNOT1-221ENST00000569924 RHPN2P1A8MT19 583 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 SCDO00767 359 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 NKRFO15226 690 aaKnown RBP eCLIP3.76□□□□□ -1.81
CNOT1-221ENST00000569924 SART1O43290 800 aaKnown RBP3.76□□□□□ -1.81
CNOT1-221ENST00000569924 PPIP5K2O43314 1243 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 GAS2O43903 313 aaKnown RBP3.76□□□□□ -1.81
CNOT1-221ENST00000569924 NPHS1O60500 1241 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 SYPP08247 313 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 ZNF865P0CJ78 1059 aaPredicted RBP3.76□□□□□ -1.81
CNOT1-221ENST00000569924 COL6A2P12110 1019 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 MYL6BP14649 208 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 ENDOUP21128 410 aaKnown RBP3.76□□□□□ -1.81
CNOT1-221ENST00000569924 TNFSF4P23510 183 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 GPTP24298 496 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 IL12RB1P42701 662 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 MAPK9P45984 424 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 CASP5P51878 434 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 PCBP3P57721 371 aaKnown RBP3.76□□□□□ -1.81
CNOT1-221ENST00000569924 CXCL9Q07325 125 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 TNK2Q07912 1038 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 KIAA2012Q0VF49 1180 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 PPFIA1Q13136 1202 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 CDK5R2Q13319 367 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 CNGB1Q14028 1251 aaPredicted RBP3.76□□□□□ -1.81
CNOT1-221ENST00000569924 TNIP1Q15025 636 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 POLD3Q15054 466 aaPredicted RBP3.76□□□□□ -1.81
CNOT1-221ENST00000569924 AOC3Q16853 763 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 FIGNQ5HY92 759 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 RNFT1Q5M7Z0 435 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 IZUMO3Q5VZ72 239 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 MBNL2Q5VZF2 373 aaKnown RBP3.76□□□□□ -1.81
CNOT1-221ENST00000569924 PPP4R3AQ6IN85 833 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 CYP4F22Q6NT55 531 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 ESPNLQ6ZVH7 1005 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 SYDE1Q6ZW31 735 aaPredicted RBP3.76□□□□□ -1.81
CNOT1-221ENST00000569924 CEP68Q76N32 757 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 FAM214BQ7L5A3 538 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 SP8Q8IXZ3 490 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 NLGN4XQ8N0W4 816 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 Q8N1Y9 231 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 NGEFQ8N5V2 710 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 PPM1NQ8N819 430 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 CCDC89Q8N998 374 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 GIMAP7Q8NHV1 300 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 SH3RF2Q8TEC5 729 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 SNRNP27Q8WVK2 155 aaKnown RBP3.76□□□□□ -1.81
CNOT1-221ENST00000569924 DPF3Q92784 378 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 ARL8AQ96BM9 186 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 PLEKHF1Q96S99 279 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 UTP14AQ9BVJ6 771 aaKnown RBP3.76□□□□□ -1.81
CNOT1-221ENST00000569924 COL25A1Q9BXS0 654 aaPredicted RBP3.76□□□□□ -1.81
CNOT1-221ENST00000569924 WNT8AQ9H1J5 351 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 DUSP15Q9H1R2 295 aaPredicted RBP3.76□□□□□ -1.81
CNOT1-221ENST00000569924 PNNQ9H307 717 aaKnown RBP3.76□□□□□ -1.81
CNOT1-221ENST00000569924 KCNH7Q9NS40 1196 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 AP5S1Q9NUS5 200 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 BABAM1Q9NWV8 329 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 MIS18AQ9NYP9 233 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 GPRC5BQ9NZH0 403 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 EDARQ9UNE0 448 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 SRPK3Q9UPE1 567 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 GPR52Q9Y2T5 361 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 RRP7AQ9Y3A4 280 aaKnown RBP3.76□□□□□ -1.81
CNOT1-221ENST00000569924 LRRFIP2Q9Y608 721 aaKnown RBP3.76□□□□□ -1.81
CNOT1-221ENST00000569924 ANKRD36CQ5JPF3 1778 aa3.76□□□□□ -1.81
CNOT1-221ENST00000569924 ABCC4O15439 1325 aa3.75□□□□□ -1.81
CNOT1-221ENST00000569924 A0A087WV62 115 aa3.75□□□□□ -1.81
CNOT1-221ENST00000569924 A0A1B0GVC2 190 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms