RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 USP41Q3LFD5 358 aa13.68□□□□□ -0.22
SCAMP2-212ENST00000569904 LILRA6Q6PI73 481 aa13.68□□□□□ -0.22
SCAMP2-212ENST00000569904 ELMSAN1Q6PJG2 1045 aa13.68□□□□□ -0.22
SCAMP2-212ENST00000569904 CCDC149Q6ZUS6 474 aa13.68□□□□□ -0.22
SCAMP2-212ENST00000569904 OTOP3Q7RTS5 596 aa13.68□□□□□ -0.22
SCAMP2-212ENST00000569904 ZBTB33Q86T24 672 aa13.68□□□□□ -0.22
SCAMP2-212ENST00000569904 ALYREFQ86V81 257 aaKnown RBP13.68□□□□□ -0.22
SCAMP2-212ENST00000569904 FAM184AQ8NB25 1140 aa13.68□□□□□ -0.22
SCAMP2-212ENST00000569904 KIFAP3Q92845 792 aa13.68□□□□□ -0.22
SCAMP2-212ENST00000569904 ACSF2Q96CM8 615 aaPredicted RBP13.68□□□□□ -0.22
SCAMP2-212ENST00000569904 PLEKHA4Q9H4M7 779 aa13.68□□□□□ -0.22
SCAMP2-212ENST00000569904 NOL7Q9UMY1 257 aaKnown RBP13.68□□□□□ -0.22
SCAMP2-212ENST00000569904 CITO14578 2027 aa13.68□□□□□ -0.22
SCAMP2-212ENST00000569904 PRKCBP05771 671 aa13.67□□□□□ -0.22
SCAMP2-212ENST00000569904 PRPHP41219 470 aa13.67□□□□□ -0.22
SCAMP2-212ENST00000569904 MRE11P49959 708 aa13.67□□□□□ -0.22
SCAMP2-212ENST00000569904 EFNA5P52803 228 aa13.67□□□□□ -0.22
SCAMP2-212ENST00000569904 HSP90AA2PQ14568 343 aaPredicted RBP13.67□□□□□ -0.22
SCAMP2-212ENST00000569904 BHMT2Q9H2M3 363 aa13.67□□□□□ -0.22
SCAMP2-212ENST00000569904 WDR6Q9NNW5 1121 aaKnown RBP13.67□□□□□ -0.22
SCAMP2-212ENST00000569904 ZDHHC7Q9NXF8 308 aa13.67□□□□□ -0.22
SCAMP2-212ENST00000569904 KLK14Q9P0G3 267 aa13.67□□□□□ -0.22
SCAMP2-212ENST00000569904 LRWD1Q9UFC0 647 aa13.67□□□□□ -0.22
SCAMP2-212ENST00000569904 PARP2Q9UGN5 583 aa13.67□□□□□ -0.22
SCAMP2-212ENST00000569904 LIMD1Q9UGP4 676 aa13.67□□□□□ -0.22
SCAMP2-212ENST00000569904 SF3B1O75533 1304 aaKnown RBP eCLIP13.66□□□□□ -0.224e-10■■■■■ 40.1
SCAMP2-212ENST00000569904 CCDC195A0A1B0GUA6 201 aa13.66□□□□□ -0.22
SCAMP2-212ENST00000569904 TMEM189-UBE2V1I3L0A0 370 aa13.66□□□□□ -0.22
SCAMP2-212ENST00000569904 TGM5O43548 720 aa13.66□□□□□ -0.22
SCAMP2-212ENST00000569904 RECQL4O94761 1208 aa13.66□□□□□ -0.22
SCAMP2-212ENST00000569904 PDGFBP01127 241 aaPredicted RBP13.66□□□□□ -0.22
SCAMP2-212ENST00000569904 THP07101 528 aa13.66□□□□□ -0.22
SCAMP2-212ENST00000569904 ASGR2P07307 311 aa13.66□□□□□ -0.22
SCAMP2-212ENST00000569904 CCT6AP40227 531 aaKnown RBP13.66□□□□□ -0.22
SCAMP2-212ENST00000569904 PTGDRQ13258 359 aa13.66□□□□□ -0.22
SCAMP2-212ENST00000569904 NBR1Q14596 966 aa13.66□□□□□ -0.22
SCAMP2-212ENST00000569904 DCAF4L1Q3SXM0 396 aa13.66□□□□□ -0.22
SCAMP2-212ENST00000569904 DEPTORQ8TB45 409 aa13.66□□□□□ -0.22
SCAMP2-212ENST00000569904 ZNF707Q96C28 371 aaPredicted RBP13.66□□□□□ -0.22
SCAMP2-212ENST00000569904 PAAF1Q9BRP4 392 aa13.66□□□□□ -0.22
SCAMP2-212ENST00000569904 ADPGKQ9BRR6 497 aa13.66□□□□□ -0.22
SCAMP2-212ENST00000569904 RAB34Q9BZG1 259 aa13.66□□□□□ -0.22
SCAMP2-212ENST00000569904 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.66□□□□□ -0.22
SCAMP2-212ENST00000569904 SNTG2Q9NY99 539 aa13.66□□□□□ -0.22
SCAMP2-212ENST00000569904 KIAA1024Q9UPX6 916 aa13.66□□□□□ -0.22
SCAMP2-212ENST00000569904 PCDHB6Q9Y5E3 794 aa13.66□□□□□ -0.22
SCAMP2-212ENST00000569904 N4BP1O75113 896 aaKnown RBP13.65□□□□□ -0.22
SCAMP2-212ENST00000569904 TADA2AO75478 443 aa13.65□□□□□ -0.22
SCAMP2-212ENST00000569904 GNL2Q13823 731 aaKnown RBP13.65□□□□□ -0.22
SCAMP2-212ENST00000569904 RTP2Q5QGT7 225 aa13.65□□□□□ -0.22
SCAMP2-212ENST00000569904 EEF1DP3Q658K8 133 aa13.65□□□□□ -0.22
SCAMP2-212ENST00000569904 DAW1Q8N136 415 aa13.65□□□□□ -0.22
SCAMP2-212ENST00000569904 KCTD17Q8N5Z5 321 aa13.65□□□□□ -0.22
SCAMP2-212ENST00000569904 PIK3R5Q8WYR1 880 aa13.65□□□□□ -0.22
SCAMP2-212ENST00000569904 IFT74Q96LB3 600 aa13.65□□□□□ -0.22
SCAMP2-212ENST00000569904 NT5C3AQ9H0P0 336 aa13.65□□□□□ -0.22
SCAMP2-212ENST00000569904 IRF2BPLQ9H1B7 796 aa13.65□□□□□ -0.22
SCAMP2-212ENST00000569904 CXCL16Q9H2A7 254 aa13.65□□□□□ -0.22
SCAMP2-212ENST00000569904 SMOC2Q9H3U7 446 aa13.65□□□□□ -0.22
SCAMP2-212ENST00000569904 TMEM134Q9H6X4 195 aa13.65□□□□□ -0.22
SCAMP2-212ENST00000569904 KCNK12Q9HB15 430 aa13.65□□□□□ -0.22
SCAMP2-212ENST00000569904 DDX19AQ9NUU7 478 aaKnown RBP13.65□□□□□ -0.22
SCAMP2-212ENST00000569904 IGSF9Q9P2J2 1179 aa13.65□□□□□ -0.22
SCAMP2-212ENST00000569904 ARHGAP28Q9P2N2 729 aa13.65□□□□□ -0.22
SCAMP2-212ENST00000569904 EPS15L1Q9UBC2 864 aa13.65□□□□□ -0.22
SCAMP2-212ENST00000569904 DUSP12Q9UNI6 340 aa13.65□□□□□ -0.22
SCAMP2-212ENST00000569904 CLUHO75153 1309 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 PHLPP2Q6ZVD8 1323 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 SPDYE4A6NLX3 237 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 RFPL2O75678 378 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 KIF4AO95239 1232 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 ELAVL2Q12926 359 aaKnown RBP13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 TDGQ13569 410 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 RABEP1Q15276 862 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 IL17AQ16552 155 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 XKR4Q5GH76 650 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 HYIQ5T013 277 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 NT5DC1Q5TFE4 455 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 LNX1Q8TBB1 728 aaPredicted RBP13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 SNX29Q8TEQ0 813 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 RIN2Q8WYP3 895 aaPredicted RBP13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 STAMQ92783 540 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 NXPE3Q969Y0 559 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 B3GALT6Q96L58 329 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 PPP1R10Q96QC0 940 aaKnown RBP13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 CLSTN3Q9BQT9 956 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 TTPALQ9BTX7 342 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 MMTAG2Q9BU76 263 aaKnown RBP13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 KIFC3Q9BVG8 833 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 C17orf75Q9HAS0 396 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 PTPRHQ9HD43 1115 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 CACNG4Q9UBN1 327 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 FBXW11Q9UKB1 542 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 TNFSF13BQ9Y275 285 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 NOTCH4Q99466 2003 aa13.64□□□□□ -0.23
SCAMP2-212ENST00000569904 DOCK6Q96HP0 2047 aa13.63□□□□□ -0.23
SCAMP2-212ENST00000569904 K7ERI5 159 aa13.63□□□□□ -0.23
SCAMP2-212ENST00000569904 ZMYND10O75800 440 aa13.63□□□□□ -0.23
SCAMP2-212ENST00000569904 POU2F2P09086 479 aa13.63□□□□□ -0.23
SCAMP2-212ENST00000569904 PROZP22891 400 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms