RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 TDRD5Q8NAT2 981 aaKnown RBP15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 HASPINQ8TF76 798 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 PRIMPOLQ96LW4 560 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 EMILIN2Q9BXX0 1053 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 KCNH6Q9H252 994 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 DDX19AQ9NUU7 478 aaKnown RBP15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 SORCS3Q9UPU3 1222 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 KIAA1024Q9UPX6 916 aa15.3■□□□□ 0.04
GTF3C1-211ENST00000569653 E9PMD0 336 aa15.29■□□□□ 0.04
GTF3C1-211ENST00000569653 KIF4AO95239 1232 aa15.29■□□□□ 0.04
GTF3C1-211ENST00000569653 PAPLNO95428 1278 aa15.29■□□□□ 0.04
GTF3C1-211ENST00000569653 LIG1P18858 919 aa15.29■□□□□ 0.04
GTF3C1-211ENST00000569653 NAMPTP43490 491 aa15.29■□□□□ 0.04
GTF3C1-211ENST00000569653 MAPK7Q13164 816 aa15.29■□□□□ 0.04
GTF3C1-211ENST00000569653 PRPF4BQ13523 1007 aaKnown RBP15.29■□□□□ 0.04
GTF3C1-211ENST00000569653 CD300LGQ6UXG3 332 aa15.29■□□□□ 0.04
GTF3C1-211ENST00000569653 TAS1R3Q7RTX0 852 aa15.29■□□□□ 0.04
GTF3C1-211ENST00000569653 ZBTB8OSQ8IWT0 167 aa15.29■□□□□ 0.04
GTF3C1-211ENST00000569653 TMEM87AQ8NBN3 555 aa15.29■□□□□ 0.04
GTF3C1-211ENST00000569653 ERMNQ8TAM6 284 aa15.29■□□□□ 0.04
GTF3C1-211ENST00000569653 RUSC1Q9BVN2 902 aa15.29■□□□□ 0.04
GTF3C1-211ENST00000569653 LRWD1Q9UFC0 647 aa15.29■□□□□ 0.04
GTF3C1-211ENST00000569653 ADAM28Q9UKQ2 775 aa15.29■□□□□ 0.04
GTF3C1-211ENST00000569653 USTQ9Y2C2 406 aa15.29■□□□□ 0.04
GTF3C1-211ENST00000569653 CFAP54Q96N23 3096 aa15.29■□□□□ 0.04
GTF3C1-211ENST00000569653 ACKR2O00590 384 aa15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 MEFVO15553 781 aaPredicted RBP15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 ADAM12O43184 909 aa15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 TGM5O43548 720 aa15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 ADH1AP07327 375 aa15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 NCBP1Q09161 790 aaKnown RBP15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 TUSC3Q13454 348 aa15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 HSP90AA2PQ14568 343 aaPredicted RBP15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 LILRA6Q6PI73 481 aa15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 ZBTB33Q86T24 672 aa15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 PALB2Q86YC2 1186 aa15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 GLYCTKQ8IVS8 523 aa15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 CEP120Q8N960 986 aa15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 FAM184AQ8NB25 1140 aa15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 CMASQ8NFW8 434 aaPredicted RBP15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 RIN2Q8WYP3 895 aaPredicted RBP15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 COLEC11Q9BWP8 271 aa15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 C2orf40Q9H1Z8 148 aa15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 STK39Q9UEW8 545 aa15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 DMDP11532 3685 aa15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 ZFHX2Q9C0A1 2572 aaPredicted RBP15.28■□□□□ 0.04
GTF3C1-211ENST00000569653 N4BP3O15049 544 aa15.27■□□□□ 0.04
GTF3C1-211ENST00000569653 GLUD1P00367 558 aa15.27■□□□□ 0.04
GTF3C1-211ENST00000569653 MUTP22033 750 aa15.27■□□□□ 0.04
GTF3C1-211ENST00000569653 AVPR2P30518 371 aa15.27■□□□□ 0.04
GTF3C1-211ENST00000569653 MRE11P49959 708 aa15.27■□□□□ 0.04
GTF3C1-211ENST00000569653 MTMR3Q13615 1198 aa15.27■□□□□ 0.04
GTF3C1-211ENST00000569653 MAPK6Q16659 721 aa15.27■□□□□ 0.04
GTF3C1-211ENST00000569653 GLRA4Q5JXX5 417 aa15.27■□□□□ 0.04
GTF3C1-211ENST00000569653 HAUS3Q68CZ6 603 aa15.27■□□□□ 0.04
GTF3C1-211ENST00000569653 C15orf39Q6ZRI6 1047 aa15.27■□□□□ 0.04
GTF3C1-211ENST00000569653 SUGP1Q8IWZ8 645 aaKnown RBP15.27■□□□□ 0.04
GTF3C1-211ENST00000569653 TMEM105Q8N8V8 129 aa15.27■□□□□ 0.04
GTF3C1-211ENST00000569653 DEPTORQ8TB45 409 aa15.27■□□□□ 0.04
GTF3C1-211ENST00000569653 SNX29Q8TEQ0 813 aa15.27■□□□□ 0.04
GTF3C1-211ENST00000569653 PNMA5Q96PV4 448 aa15.27■□□□□ 0.04
GTF3C1-211ENST00000569653 MYADMQ96S97 322 aa15.27■□□□□ 0.04
GTF3C1-211ENST00000569653 NOL7Q9UMY1 257 aaKnown RBP15.27■□□□□ 0.04
GTF3C1-211ENST00000569653 GDAQ9Y2T3 454 aa15.27■□□□□ 0.04
GTF3C1-211ENST00000569653 COL4A3Q01955 1670 aa15.26■□□□□ 0.03
GTF3C1-211ENST00000569653 MYH15Q9Y2K3 1946 aa15.26■□□□□ 0.03
GTF3C1-211ENST00000569653 CCDC195A0A1B0GUA6 201 aa15.26■□□□□ 0.03
GTF3C1-211ENST00000569653 ABLIM1O14639 778 aa15.26■□□□□ 0.03
GTF3C1-211ENST00000569653 SOX4Q06945 474 aaPredicted RBP15.26■□□□□ 0.03
GTF3C1-211ENST00000569653 PDIA5Q14554 519 aa15.26■□□□□ 0.03
GTF3C1-211ENST00000569653 USP41Q3LFD5 358 aa15.26■□□□□ 0.03
GTF3C1-211ENST00000569653 CCDC149Q6ZUS6 474 aa15.26■□□□□ 0.03
GTF3C1-211ENST00000569653 UBALD2Q8IYN6 164 aa15.26■□□□□ 0.03
GTF3C1-211ENST00000569653 HACE1Q8IYU2 909 aa15.26■□□□□ 0.03
GTF3C1-211ENST00000569653 C3orf58Q8NDZ4 430 aa15.26■□□□□ 0.03
GTF3C1-211ENST00000569653 LRRC15Q8TF66 581 aa15.26■□□□□ 0.03
GTF3C1-211ENST00000569653 RSAD2Q8WXG1 361 aa15.26■□□□□ 0.03
GTF3C1-211ENST00000569653 PPP1R10Q96QC0 940 aaKnown RBP15.26■□□□□ 0.03
GTF3C1-211ENST00000569653 CLSTN3Q9BQT9 956 aa15.26■□□□□ 0.03
GTF3C1-211ENST00000569653 FNIP2Q9P278 1114 aa15.26■□□□□ 0.03
GTF3C1-211ENST00000569653 NARSO43776 548 aaKnown RBP15.25■□□□□ 0.03
GTF3C1-211ENST00000569653 HIP1RO75146 1068 aa15.25■□□□□ 0.03
GTF3C1-211ENST00000569653 NPTX2P47972 431 aa15.25■□□□□ 0.03
GTF3C1-211ENST00000569653 GNL2Q13823 731 aaKnown RBP15.25■□□□□ 0.03
GTF3C1-211ENST00000569653 ATF7IP2Q5U623 682 aa15.25■□□□□ 0.03
GTF3C1-211ENST00000569653 CWF19L1Q69YN2 538 aaKnown RBP15.25■□□□□ 0.03
GTF3C1-211ENST00000569653 RINT1Q6NUQ1 792 aa15.25■□□□□ 0.03
GTF3C1-211ENST00000569653 RSPO2Q6UXX9 243 aaPredicted RBP15.25■□□□□ 0.03
GTF3C1-211ENST00000569653 C1orf186Q6ZWK4 172 aa15.25■□□□□ 0.03
GTF3C1-211ENST00000569653 TMEM130Q8N3G9 435 aa15.25■□□□□ 0.03
GTF3C1-211ENST00000569653 ST13P5Q8NFI4 369 aaPredicted RBP15.25■□□□□ 0.03
GTF3C1-211ENST00000569653 LNX1Q8TBB1 728 aaPredicted RBP15.25■□□□□ 0.03
GTF3C1-211ENST00000569653 TMX3Q96JJ7 454 aa15.25■□□□□ 0.03
GTF3C1-211ENST00000569653 RHOBTB2Q9BYZ6 727 aa15.25■□□□□ 0.03
GTF3C1-211ENST00000569653 CDT1Q9H211 546 aa15.25■□□□□ 0.03
GTF3C1-211ENST00000569653 GOLGA2P5Q9HBQ8 144 aa15.25■□□□□ 0.03
GTF3C1-211ENST00000569653 PTPRHQ9HD43 1115 aa15.25■□□□□ 0.03
GTF3C1-211ENST00000569653 WDR6Q9NNW5 1121 aaKnown RBP15.25■□□□□ 0.03
GTF3C1-211ENST00000569653 FAM86C1Q9NVL1 165 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms