RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 GDAQ9Y2T3 454 aa15.15■□□□□ 0.02
HERPUD1-218ENST00000569569 XIRP2A4UGR9 3374 aa15.15■□□□□ 0.02
HERPUD1-218ENST00000569569 TOM1L1O75674 476 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 THP07101 528 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 MCF2P10911 925 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 GRM5P41594 1212 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 OR1G1P47890 313 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 GTF2BQ00403 316 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 CTC1Q2NKJ3 1217 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 PLPP4Q5VZY2 271 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 EP400NLQ6ZTU2 488 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 ADGRD2Q7Z7M1 963 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 ZBTB33Q86T24 672 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 RBM23Q86U06 439 aaKnown RBP15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 VPS52Q8N1B4 723 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 IQUBQ8NA54 791 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 DNAJC19Q96DA6 116 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 ZBTB45Q96K62 511 aaPredicted RBP15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 FIZ1Q96SL8 496 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 CDCA3Q99618 268 aaPredicted RBP15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 CCDC94Q9BW85 323 aaPredicted RBP15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 LRRC27Q9C0I9 530 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 TNMDQ9H2S6 317 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 TLE6Q9H808 572 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 CLDND1Q9NY35 253 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 FAM13BQ9NYF5 915 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 SEL1LQ9UBV2 794 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 TBX20Q9UMR3 447 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 PCDHGC5Q9Y5F6 944 aa15.14■□□□□ 0.01
HERPUD1-218ENST00000569569 FSD2A1L4K1 749 aa15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 ABLIM1O14639 778 aa15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 CLDN3O15551 220 aa15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 GAP43P17677 238 aa15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 KCNA5P22460 613 aa15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 NMT1P30419 496 aaKnown RBP15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 GTF2F1P35269 517 aaKnown RBP eCLIP15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 NRIP1P48552 1158 aa15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 YARSP54577 528 aaKnown RBP15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 AMPD3Q01432 767 aa15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 ADAM15Q13444 863 aa15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 SMC1AQ14683 1233 aaKnown RBP15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 E2F4Q16254 413 aa15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 EFHBQ8N7U6 833 aa15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 CEP120Q8N960 986 aa15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 BICD1Q96G01 975 aa15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 SPATA32Q96LK8 384 aa15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 COLEC11Q9BWP8 271 aa15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 ST6GALNAC4Q9H4F1 302 aa15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 TOPORSQ9NS56 1045 aaPredicted RBP15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 KBTBD4Q9NVX7 518 aa15.13■□□□□ 0.01
HERPUD1-218ENST00000569569 MTCL1Q9Y4B5 1905 aaKnown RBP15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 HIDE1A8MVS5 230 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 PTGESO14684 152 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 POLR2DO15514 142 aaKnown RBP15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 CXCL14O95715 111 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 CTSAP10619 480 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 BMP1P13497 986 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 IDEP14735 1019 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 LTBRP36941 435 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 MATR3P43243 847 aaKnown RBP eCLIP15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 LIG4P49917 911 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 OSTNP61366 133 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 MCL1Q07820 350 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 TUSC3Q13454 348 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 NOLC1Q14978 699 aaKnown RBP eCLIP15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 DUSP6Q16828 381 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 LEXMQ3ZCV2 418 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 RESP18Q5W5W9 173 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 ZNF720Q7Z2F6 126 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 SFR1Q86XK3 245 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 MRPL43Q8N983 215 aaKnown RBP15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 BCL7CQ8WUZ0 217 aaPredicted RBP15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 LEO1Q8WVC0 666 aaPredicted RBP15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 DHX58Q96C10 678 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 ACAP3Q96P50 834 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 ZBP1Q9H171 429 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 MARCH5Q9NX47 278 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 ANKFY1Q9P2R3 1169 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 PRG3Q9Y2Y8 225 aaPredicted RBP15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 IRAK3Q9Y616 596 aa15.12■□□□□ 0.01
HERPUD1-218ENST00000569569 FRMD3A2A2Y4 597 aa15.11■□□□□ 0.01
HERPUD1-218ENST00000569569 C2orf71A6NGG8 1288 aa15.11■□□□□ 0.01
HERPUD1-218ENST00000569569 HNRNPDLO14979 420 aaKnown RBP15.11■□□□□ 0.01
HERPUD1-218ENST00000569569 PER2O15055 1255 aa15.11■□□□□ 0.01
HERPUD1-218ENST00000569569 PIGRP01833 764 aa15.11■□□□□ 0.01
HERPUD1-218ENST00000569569 HARSP12081 509 aaKnown RBP15.11■□□□□ 0.01
HERPUD1-218ENST00000569569 KCNQ1P51787 676 aa15.11■□□□□ 0.01
HERPUD1-218ENST00000569569 NUCB2P80303 420 aa15.11■□□□□ 0.01
HERPUD1-218ENST00000569569 ZC2HC1CQ53FD0 456 aaPredicted RBP15.11■□□□□ 0.01
HERPUD1-218ENST00000569569 XKR4Q5GH76 650 aa15.11■□□□□ 0.01
HERPUD1-218ENST00000569569 HERC4Q5GLZ8 1057 aaPredicted RBP15.11■□□□□ 0.01
HERPUD1-218ENST00000569569 ADALQ6DHV7 355 aa15.11■□□□□ 0.01
HERPUD1-218ENST00000569569 ALKAL1Q6UXT8 129 aa15.11■□□□□ 0.01
HERPUD1-218ENST00000569569 STAMQ92783 540 aa15.11■□□□□ 0.01
HERPUD1-218ENST00000569569 HVCN1Q96D96 273 aa15.11■□□□□ 0.01
HERPUD1-218ENST00000569569 PYM1Q9BRP8 204 aaKnown RBP15.11■□□□□ 0.01
HERPUD1-218ENST00000569569 SCAND2PQ9GZW5 306 aaPredicted RBP15.11■□□□□ 0.01
HERPUD1-218ENST00000569569 CXCL16Q9H2A7 254 aa15.11■□□□□ 0.01
HERPUD1-218ENST00000569569 MRPL44Q9H9J2 332 aaKnown RBP15.11■□□□□ 0.01
HERPUD1-218ENST00000569569 MAGEF1Q9HAY2 307 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms