RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	CDC5L	Q99459	802 aa	Known RBP	4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	TARS2	Q9BW92	718 aa	Known RBP	4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	AKIP1	Q9NQ31	210 aa		4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	FANCL	Q9NW38	375 aa		4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	ANKFY1	Q9P2R3	1169 aa		4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	EVL	Q9UI08	416 aa	Predicted RBP	4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	PPP2R3B	Q9Y5P8	575 aa		4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	TBKBP1	A7MCY6	615 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	RAB11FIP3	O75154	756 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	CDC45	O75419	566 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	CLEC2L	P0C7M8	214 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	APOBEC3A	P31941	199 aa	Predicted RBP	4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	AVPR1B	P47901	424 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	ZNF81	P51508	661 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	PPARA	Q07869	468 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	SEPT7	Q16181	437 aa	Known RBP	4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	DDB1	Q16531	1140 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	BMT2	Q1RMZ1	405 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	ERCC6L	Q2NKX8	1250 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	BEAN1	Q3B7T3	259 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	DALRD3	Q5D0E6	543 aa	Known RBP	4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	BROX	Q5VW32	411 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	SIMC1	Q8NDZ2	872 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	ANKS1A	Q92625	1134 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	SLC5A5	Q92911	643 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	GPR101	Q96P66	508 aa	Predicted RBP	4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	WDR11	Q9BZH6	1224 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	ZNF768	Q9H5H4	540 aa	Known RBP	4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	PIF1	Q9H611	641 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	EMC7	Q9NPA0	242 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	SYBU	Q9NX95	663 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	MAPRE3	Q9UPY8	281 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	CDY2A	Q9Y6F7	541 aa		4.89	□□□□□ -1.63
UBR1-209	ENST00000569243	PJA2	O43164	708 aa		4.88	□□□□□ -1.63
UBR1-209	ENST00000569243	PHF2	O75151	1096 aa		4.88	□□□□□ -1.63
UBR1-209	ENST00000569243	SPATA31D3	P0C874	917 aa		4.88	□□□□□ -1.63
UBR1-209	ENST00000569243	CRHR1	P34998	444 aa		4.88	□□□□□ -1.63
UBR1-209	ENST00000569243	IL2	P60568	153 aa		4.88	□□□□□ -1.63
UBR1-209	ENST00000569243	DHCR24	Q15392	516 aa		4.88	□□□□□ -1.63
UBR1-209	ENST00000569243	EFCAB12	Q6NXP0	572 aa		4.88	□□□□□ -1.63
UBR1-209	ENST00000569243	BTNL9	Q6UXG8	535 aa		4.88	□□□□□ -1.63
UBR1-209	ENST00000569243	SPATA31D4	Q6ZUB0	917 aa		4.88	□□□□□ -1.63
UBR1-209	ENST00000569243	LCORL	Q8N3X6	602 aa		4.88	□□□□□ -1.63
UBR1-209	ENST00000569243	TRPM5	Q9NZQ8	1165 aa		4.88	□□□□□ -1.63
UBR1-209	ENST00000569243	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	GSG1L2	A8MUP6	293 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	LEFTY2	O00292	366 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	ZEB2	O60315	1214 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	KDM1A	O60341	852 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	BPI	P17213	487 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	CTSS	P25774	331 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	CXCR5	P32302	372 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	PLA2G5	P39877	138 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	FAM189B	P81408	668 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	NHLH2	Q02577	135 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	C21orf62-AS1	Q17RA5	79 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	PITRM1	Q5JRX3	1037 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	CCDC62	Q6P9F0	684 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	DHX37	Q8IY37	1157 aa	Known RBP	4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	CMTR2	Q8IYT2	770 aa	Known RBP	4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	OR10H5	Q8NGA6	315 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	ZFP28	Q8NHY6	868 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	LINC00476	Q8WZB0	136 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	SLC9A6	Q92581	669 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	CAVIN3	Q969G5	261 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	RAX2	Q96IS3	184 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	ZNF778	Q96MU6	729 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	ACAP3	Q96P50	834 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	ANO3	Q9BYT9	981 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	GPRC5D	Q9NZD1	345 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	FAM30A	Q9NZY2	134 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	NOC2L	Q9Y3T9	749 aa	Known RBP	4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	RPTOR	Q8N122	1335 aa		4.87	□□□□□ -1.63
UBR1-209	ENST00000569243	PIPSL	A2A3N6	862 aa		4.86	□□□□□ -1.63
UBR1-209	ENST00000569243	MARCH11	A6NNE9	402 aa		4.86	□□□□□ -1.63
UBR1-209	ENST00000569243	PRAMEF4	O60810	478 aa		4.86	□□□□□ -1.63
UBR1-209	ENST00000569243	TMEM127	O75204	238 aa		4.86	□□□□□ -1.63
UBR1-209	ENST00000569243	ITGA10	O75578	1167 aa		4.86	□□□□□ -1.63
UBR1-209	ENST00000569243	NCR1	O76036	304 aa		4.86	□□□□□ -1.63
UBR1-209	ENST00000569243	ZFPL1	O95159	310 aa		4.86	□□□□□ -1.63
UBR1-209	ENST00000569243	HKR1	P10072	659 aa		4.86	□□□□□ -1.63
UBR1-209	ENST00000569243	FLT3LG	P49771	235 aa		4.86	□□□□□ -1.63
UBR1-209	ENST00000569243	GUCY1B3	Q02153	619 aa		4.86	□□□□□ -1.63
UBR1-209	ENST00000569243	TRIM25	Q14258	630 aa	Known RBP	4.86	□□□□□ -1.63
UBR1-209	ENST00000569243	FSCN1	Q16658	493 aa	Known RBP	4.86	□□□□□ -1.63
UBR1-209	ENST00000569243	ATP13A4	Q4VNC1	1196 aa		4.86	□□□□□ -1.63
UBR1-209	ENST00000569243	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.86	□□□□□ -1.63
UBR1-209	ENST00000569243	ABHD17B	Q5VST6	288 aa		4.86	□□□□□ -1.63
UBR1-209	ENST00000569243	C1QL2	Q7Z5L3	287 aa		4.86	□□□□□ -1.63
UBR1-209	ENST00000569243	XYLT1	Q86Y38	959 aa		4.86	□□□□□ -1.63
UBR1-209	ENST00000569243	SYT12	Q8IV01	421 aa		4.86	□□□□□ -1.63
UBR1-209	ENST00000569243	SPON1	Q9HCB6	807 aa		4.86	□□□□□ -1.63
UBR1-209	ENST00000569243		A0A087X0B3	334 aa		4.85	□□□□□ -1.63
UBR1-209	ENST00000569243	RBMXL2	O75526	392 aa	Known RBP	4.85	□□□□□ -1.63
UBR1-209	ENST00000569243	NDUFA10	O95299	355 aa		4.85	□□□□□ -1.63
UBR1-209	ENST00000569243	SESN3	P58005	492 aa		4.85	□□□□□ -1.63
UBR1-209	ENST00000569243	RNASE9	P60153	205 aa	Known RBP	4.85	□□□□□ -1.63
UBR1-209	ENST00000569243	MXRA7	P84157	204 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms