RNA–Protein interactions for RNA: ENST00000569050.1

PKM-223, Transcript of pyruvate kinase M1/2, human

TSL 4

Gene PKM, Length 457 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-223	ENST00000569050	LAMTOR4	Q0VGL1	99 aa		18.87	■□□□□ 0.61
PKM-223	ENST00000569050	POTEH	Q6S545	545 aa		18.87	■□□□□ 0.61
PKM-223	ENST00000569050	CCDC12	Q8WUD4	166 aa	Predicted RBP	18.87	■□□□□ 0.61
PKM-223	ENST00000569050	CPB2	Q96IY4	423 aa		18.87	■□□□□ 0.61
PKM-223	ENST00000569050	NDRG2	Q9UN36	371 aa	Known RBP	18.87	■□□□□ 0.61
PKM-223	ENST00000569050	KLF18	A0A0U1RQI7	1052 aa		18.86	■□□□□ 0.61
PKM-223	ENST00000569050	ADAM12	O43184	909 aa		18.86	■□□□□ 0.61
PKM-223	ENST00000569050	ADD1	P35611	737 aa	Known RBP	18.86	■□□□□ 0.61
PKM-223	ENST00000569050	SHC2	P98077	582 aa		18.86	■□□□□ 0.61
PKM-223	ENST00000569050	PABPC1L	Q4VXU2	614 aa	Known RBP	18.86	■□□□□ 0.61
PKM-223	ENST00000569050	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	18.86	■□□□□ 0.61
PKM-223	ENST00000569050	MAMSTR	Q6ZN01	415 aa		18.86	■□□□□ 0.61
PKM-223	ENST00000569050	SLC7A14	Q8TBB6	771 aa		18.86	■□□□□ 0.61
PKM-223	ENST00000569050	PSPC1	Q8WXF1	523 aa	Known RBP	18.86	■□□□□ 0.61
PKM-223	ENST00000569050	SLC7A3	Q8WY07	619 aa		18.86	■□□□□ 0.61
PKM-223	ENST00000569050	PAAF1	Q9BRP4	392 aa		18.86	■□□□□ 0.61
PKM-223	ENST00000569050	NXF3	Q9H4D5	531 aa	Known RBP	18.86	■□□□□ 0.61
PKM-223	ENST00000569050	BMP2K	Q9NSY1	1161 aa	Predicted RBP	18.86	■□□□□ 0.61
PKM-223	ENST00000569050	DNMT3B	Q9UBC3	853 aa	Known RBP	18.86	■□□□□ 0.61
PKM-223	ENST00000569050	KCNH3	Q9ULD8	1083 aa		18.86	■□□□□ 0.61
PKM-223	ENST00000569050	GIT1	Q9Y2X7	761 aa		18.86	■□□□□ 0.61
PKM-223	ENST00000569050	ZFYVE26	Q68DK2	2539 aa		18.85	■□□□□ 0.61
PKM-223	ENST00000569050	SF3B1	O75533	1304 aa	Known RBP eCLIP	18.85	■□□□□ 0.61	7e-6	■■■■■ 33.4
PKM-223	ENST00000569050	TADA2A	O75478	443 aa		18.85	■□□□□ 0.61
PKM-223	ENST00000569050	ERLIN2	O94905	339 aa		18.85	■□□□□ 0.61
PKM-223	ENST00000569050	POU2F2	P09086	479 aa		18.85	■□□□□ 0.61
PKM-223	ENST00000569050	USP11	P51784	963 aa		18.85	■□□□□ 0.61
PKM-223	ENST00000569050	EXOSC10	Q01780	885 aa	Known RBP	18.85	■□□□□ 0.61
PKM-223	ENST00000569050	SIM2	Q14190	667 aa	Predicted RBP	18.85	■□□□□ 0.61
PKM-223	ENST00000569050	NOTUM	Q6P988	496 aa		18.85	■□□□□ 0.61
PKM-223	ENST00000569050	RNF149	Q8NC42	400 aa		18.85	■□□□□ 0.61
PKM-223	ENST00000569050	LNX1	Q8TBB1	728 aa	Predicted RBP	18.85	■□□□□ 0.61
PKM-223	ENST00000569050	HASPIN	Q8TF76	798 aa		18.85	■□□□□ 0.61
PKM-223	ENST00000569050	PIK3R5	Q8WYR1	880 aa		18.85	■□□□□ 0.61
PKM-223	ENST00000569050	DDX1	Q92499	740 aa	Known RBP	18.85	■□□□□ 0.61
PKM-223	ENST00000569050	DNASE1L2	Q92874	299 aa		18.85	■□□□□ 0.61
PKM-223	ENST00000569050	CCDC51	Q96ER9	411 aa		18.85	■□□□□ 0.61
PKM-223	ENST00000569050	DHX33	Q9H6R0	707 aa	Known RBP	18.85	■□□□□ 0.61
PKM-223	ENST00000569050	NOTCH4	Q99466	2003 aa		18.84	■□□□□ 0.61
PKM-223	ENST00000569050	F5	P12259	2224 aa		18.84	■□□□□ 0.61
PKM-223	ENST00000569050	AKAP5	P24588	427 aa		18.84	■□□□□ 0.61
PKM-223	ENST00000569050	PSMC5	P62195	406 aa		18.84	■□□□□ 0.61
PKM-223	ENST00000569050	SATB1	Q01826	763 aa		18.84	■□□□□ 0.61
PKM-223	ENST00000569050	GRIK3	Q13003	919 aa		18.84	■□□□□ 0.61
PKM-223	ENST00000569050	SRSF5	Q13243	272 aa	Known RBP	18.84	■□□□□ 0.61
PKM-223	ENST00000569050	HSP90AA2P	Q14568	343 aa	Predicted RBP	18.84	■□□□□ 0.61
PKM-223	ENST00000569050	PPP2R5D	Q14738	602 aa		18.84	■□□□□ 0.61
PKM-223	ENST00000569050	PSMD5	Q16401	504 aa		18.84	■□□□□ 0.61
PKM-223	ENST00000569050	SLC5A9	Q2M3M2	681 aa		18.84	■□□□□ 0.61
PKM-223	ENST00000569050		Q4G0T1	1027 aa		18.84	■□□□□ 0.61
PKM-223	ENST00000569050	TANGO2	Q6ICL3	276 aa		18.84	■□□□□ 0.61
PKM-223	ENST00000569050	MCRS1	Q96EZ8	462 aa		18.84	■□□□□ 0.61
PKM-223	ENST00000569050	TTPAL	Q9BTX7	342 aa		18.84	■□□□□ 0.61
PKM-223	ENST00000569050	CSRNP2	Q9H175	543 aa		18.84	■□□□□ 0.61
PKM-223	ENST00000569050	SH2B1	Q9NRF2	756 aa	Predicted RBP	18.84	■□□□□ 0.61
PKM-223	ENST00000569050	MRPS23	Q9Y3D9	190 aa	Known RBP	18.84	■□□□□ 0.61
PKM-223	ENST00000569050	TDRD15	B5MCY1	1934 aa	Known RBP	18.83	■□□□□ 0.6
PKM-223	ENST00000569050	HR	O43593	1189 aa		18.83	■□□□□ 0.6
PKM-223	ENST00000569050	TDP2	O95551	362 aa		18.83	■□□□□ 0.6
PKM-223	ENST00000569050	CCR3	P51677	355 aa		18.83	■□□□□ 0.6
PKM-223	ENST00000569050	AXDND1	Q5T1B0	1012 aa	Predicted RBP	18.83	■□□□□ 0.6
PKM-223	ENST00000569050	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	18.83	■□□□□ 0.6
PKM-223	ENST00000569050	FERMT3	Q86UX7	667 aa		18.83	■□□□□ 0.6
PKM-223	ENST00000569050	BICD2	Q8TD16	824 aa		18.83	■□□□□ 0.6
PKM-223	ENST00000569050	CEP170P1	Q96L14	293 aa		18.83	■□□□□ 0.6
PKM-223	ENST00000569050	IER2	Q9BTL4	223 aa		18.83	■□□□□ 0.6
PKM-223	ENST00000569050	WRAP73	Q9P2S5	460 aa	Predicted RBP	18.83	■□□□□ 0.6
PKM-223	ENST00000569050	EML1	O00423	815 aa		18.82	■□□□□ 0.6
PKM-223	ENST00000569050	FCAR	P24071	287 aa		18.82	■□□□□ 0.6
PKM-223	ENST00000569050	AXL	P30530	894 aa		18.82	■□□□□ 0.6
PKM-223	ENST00000569050	RCAN1	P53805	252 aa		18.82	■□□□□ 0.6
PKM-223	ENST00000569050	GRM2	Q14416	872 aa		18.82	■□□□□ 0.6
PKM-223	ENST00000569050	FAM171A1	Q5VUB5	890 aa		18.82	■□□□□ 0.6
PKM-223	ENST00000569050	IL31	Q6EBC2	164 aa		18.82	■□□□□ 0.6
PKM-223	ENST00000569050	CEP57	Q86XR8	500 aa		18.82	■□□□□ 0.6
PKM-223	ENST00000569050	ETNPPL	Q8TBG4	499 aa		18.82	■□□□□ 0.6
PKM-223	ENST00000569050	TBCK	Q8TEA7	893 aa		18.82	■□□□□ 0.6
PKM-223	ENST00000569050	ELSPBP1	Q96BH3	223 aa		18.82	■□□□□ 0.6
PKM-223	ENST00000569050	LMAN1L	Q9HAT1	526 aa		18.82	■□□□□ 0.6
PKM-223	ENST00000569050	GDE1	Q9NZC3	331 aa		18.82	■□□□□ 0.6
PKM-223	ENST00000569050	KLK14	Q9P0G3	267 aa		18.82	■□□□□ 0.6
PKM-223	ENST00000569050	NAP1L2	Q9ULW6	460 aa	Predicted RBP	18.82	■□□□□ 0.6
PKM-223	ENST00000569050	CHURC1-FNTB	B4DL54	471 aa		18.81	■□□□□ 0.6
PKM-223	ENST00000569050	MAN2B1	O00754	1011 aa		18.81	■□□□□ 0.6
PKM-223	ENST00000569050	PRPF3	O43395	683 aa	Known RBP	18.81	■□□□□ 0.6
PKM-223	ENST00000569050	KIF4A	O95239	1232 aa		18.81	■□□□□ 0.6
PKM-223	ENST00000569050	PROS1	P07225	676 aa		18.81	■□□□□ 0.6
PKM-223	ENST00000569050	CEBPB	P17676	345 aa		18.81	■□□□□ 0.6
PKM-223	ENST00000569050	FNTB	P49356	437 aa		18.81	■□□□□ 0.6
PKM-223	ENST00000569050	PTEN	P60484	403 aa		18.81	■□□□□ 0.6
PKM-223	ENST00000569050	GAS6	Q14393	721 aa		18.81	■□□□□ 0.6
PKM-223	ENST00000569050	EMC2	Q15006	297 aa		18.81	■□□□□ 0.6
PKM-223	ENST00000569050	ACAP1	Q15027	740 aa		18.81	■□□□□ 0.6
PKM-223	ENST00000569050	AMHR2	Q16671	573 aa		18.81	■□□□□ 0.6
PKM-223	ENST00000569050	DHX32	Q7L7V1	743 aa	Known RBP	18.81	■□□□□ 0.6
PKM-223	ENST00000569050	TRIM6	Q9C030	488 aa	Predicted RBP	18.81	■□□□□ 0.6
PKM-223	ENST00000569050	VPS54	Q9P1Q0	977 aa		18.81	■□□□□ 0.6
PKM-223	ENST00000569050	FASN	P49327	2511 aa	Known RBP	18.81	■□□□□ 0.6
PKM-223	ENST00000569050	COL4A2	P08572	1712 aa		18.8	■□□□□ 0.6
PKM-223	ENST00000569050	CYP3A7-CYP3A51P	A0A087WV96	503 aa		18.8	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms