RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 NLRP7Q8WX94 980 aa13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 FGF13Q92913 245 aa13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 MBOAT7Q96N66 472 aa13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 FDXACB1Q9BRP7 624 aaPredicted RBP13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 SLC26A6Q9BXS9 759 aa13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 FAM126AQ9BYI3 521 aaPredicted RBP13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 SCAND2PQ9GZW5 306 aaPredicted RBP13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 PLEKHA4Q9H4M7 779 aa13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 PIDD1Q9HB75 910 aa13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 PRG3Q9Y2Y8 225 aaPredicted RBP13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 DMXL2Q8TDJ6 3036 aa13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 NOTCH4Q99466 2003 aa13.29□□□□□ -0.28
VPS9D1-207ENST00000568691 FLNBO75369 2602 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 IPO5O00410 1097 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 ZMYND10O75800 440 aa13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 STBD1O95210 358 aa13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 POMCP01189 267 aa13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 ALDH2P05091 517 aa13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 GLUD2P49448 558 aa13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 CLK2P49760 499 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 GAS6Q14393 721 aa13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 MAMSTRQ6ZN01 415 aa13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 PLA2G4DQ86XP0 818 aa13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 GLYCTKQ8IVS8 523 aa13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 KDF1Q8NAX2 398 aaPredicted RBP13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 PHKBQ93100 1093 aa13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 GPR62Q9BZJ7 368 aa13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 CHRDQ9H2X0 955 aa13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 HEBP1Q9NRV9 189 aa13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 LMBRD1Q9NUN5 540 aa13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 MIOSQ9NXC5 875 aa13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 CFAP45Q9UL16 551 aa13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 PIN4Q9Y237 131 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 PCDHB2Q9Y5E7 798 aa13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 ZFP37Q9Y6Q3 630 aaPredicted RBP13.28□□□□□ -0.28
VPS9D1-207ENST00000568691 TMEM150BA6NC51 233 aa13.27□□□□□ -0.29
VPS9D1-207ENST00000568691 TRAK2O60296 914 aa13.27□□□□□ -0.29
VPS9D1-207ENST00000568691 DSC1Q08554 894 aa13.27□□□□□ -0.29
VPS9D1-207ENST00000568691 FOXD4L5Q5VV16 416 aaPredicted RBP13.27□□□□□ -0.29
VPS9D1-207ENST00000568691 ZNF746Q6NUN9 644 aaPredicted RBP13.27□□□□□ -0.29
VPS9D1-207ENST00000568691 HEATR3Q7Z4Q2 680 aa13.27□□□□□ -0.29
VPS9D1-207ENST00000568691 ZNF710Q8N1W2 664 aa13.27□□□□□ -0.29
VPS9D1-207ENST00000568691 CCDC82Q8N4S0 544 aa13.27□□□□□ -0.29
VPS9D1-207ENST00000568691 FOXD4L4Q8WXT5 416 aaPredicted RBP13.27□□□□□ -0.29
VPS9D1-207ENST00000568691 ZNF396Q96N95 335 aaPredicted RBP13.27□□□□□ -0.29
VPS9D1-207ENST00000568691 RIC8AQ9NPQ8 531 aa13.27□□□□□ -0.29
VPS9D1-207ENST00000568691 STK39Q9UEW8 545 aa13.27□□□□□ -0.29
VPS9D1-207ENST00000568691 CEP131Q9UPN4 1083 aa13.27□□□□□ -0.29
VPS9D1-207ENST00000568691 ITPR1Q14643 2758 aa13.27□□□□□ -0.29
VPS9D1-207ENST00000568691 LOC400499M0QZD8 3231 aa13.27□□□□□ -0.29
VPS9D1-207ENST00000568691 MTCL1Q9Y4B5 1905 aaKnown RBP13.27□□□□□ -0.29
VPS9D1-207ENST00000568691 LAMA1P25391 3075 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 IGKV6-21A0A0C4DH24 114 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 hCG_1984214I3L0E3 225 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 EDIL3O43854 480 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 C1RP00736 705 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 OATP04181 439 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 U2AF2P26368 475 aaKnown RBP eCLIP13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 TMOD1P28289 359 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 HOXA11P31270 313 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 LIMK1P53667 647 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 SATB1Q01826 763 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 PRKCEQ02156 737 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 ADCY1Q08828 1119 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 SAFBQ15424 915 aaKnown RBP eCLIP13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 SF3A2Q15428 464 aaKnown RBP13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 UNQ6494/PRO21346Q6UXR6 183 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 PRR23BQ6ZRT6 265 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 FERMT3Q86UX7 667 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 KSR1Q8IVT5 923 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 NPAS3Q8IXF0 933 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 ZNF713Q8N859 430 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 SCLT1Q96NL6 688 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 GCOM2Q9BZD3 368 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 RNF39Q9H2S5 420 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 RSAD1Q9HA92 442 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 SH3GLB2Q9NR46 395 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 C2orf42Q9NWW7 574 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 PCDHA10Q9Y5I2 948 aa13.26□□□□□ -0.29
VPS9D1-207ENST00000568691 COL4A2P08572 1712 aa13.25□□□□□ -0.29
VPS9D1-207ENST00000568691 SOBPA7XYQ1 873 aa13.25□□□□□ -0.29
VPS9D1-207ENST00000568691 TOP3BO95985 862 aaKnown RBP13.25□□□□□ -0.29
VPS9D1-207ENST00000568691 SKIP12755 728 aa13.25□□□□□ -0.29
VPS9D1-207ENST00000568691 RAB27AP51159 221 aa13.25□□□□□ -0.29
VPS9D1-207ENST00000568691 UBE2HP62256 183 aa13.25□□□□□ -0.29
VPS9D1-207ENST00000568691 PFKPQ01813 784 aa13.25□□□□□ -0.29
VPS9D1-207ENST00000568691 DNM1Q05193 864 aaKnown RBP13.25□□□□□ -0.29
VPS9D1-207ENST00000568691 WDR44Q5JSH3 913 aa13.25□□□□□ -0.29
VPS9D1-207ENST00000568691 MTSS1LQ765P7 747 aa13.25□□□□□ -0.29
VPS9D1-207ENST00000568691 SMG8Q8ND04 991 aaKnown RBP13.25□□□□□ -0.29
VPS9D1-207ENST00000568691 LENG9Q96B70 501 aa13.25□□□□□ -0.29
VPS9D1-207ENST00000568691 NELL2Q99435 816 aa13.25□□□□□ -0.29
VPS9D1-207ENST00000568691 SH2D3AQ9BRG2 576 aa13.25□□□□□ -0.29
VPS9D1-207ENST00000568691 PHF20Q9BVI0 1012 aa13.25□□□□□ -0.29
VPS9D1-207ENST00000568691 FOXP1Q9H334 677 aaPredicted RBP13.25□□□□□ -0.29
VPS9D1-207ENST00000568691 MINDY3Q9H8M7 445 aa13.25□□□□□ -0.29
VPS9D1-207ENST00000568691 IFT122Q9HBG6 1241 aa13.25□□□□□ -0.29
VPS9D1-207ENST00000568691 HCFC1R1Q9NWW0 138 aa13.25□□□□□ -0.29
VPS9D1-207ENST00000568691 FNIP2Q9P278 1114 aa13.25□□□□□ -0.29
VPS9D1-207ENST00000568691 DPP7Q9UHL4 492 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms