RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 MYPNQ86TC9 1320 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 MEIS1O00470 390 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 IKBKBO14920 756 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 DNAJA2O60884 412 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 LEFTY1O75610 366 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 LRIG2O94898 1065 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 RPN1P04843 607 aaKnown RBP6.85□□□□□ -1.31
CAPN3-218ENST00000568153 FAM87AP0C7U9 286 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 TAL1P17542 331 aaPredicted RBP6.85□□□□□ -1.31
CAPN3-218ENST00000568153 HOXA7P31268 230 aaPredicted RBP6.85□□□□□ -1.31
CAPN3-218ENST00000568153 GRIK1P39086 918 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 CCT6AP40227 531 aaKnown RBP6.85□□□□□ -1.31
CAPN3-218ENST00000568153 GJA8P48165 433 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 GHRHRQ02643 423 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 CLCQ05315 142 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 CUL4BQ13620 913 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 DPCR1Q3MIW9 517 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 CEP55Q53EZ4 464 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 MUM1L1Q5H9M0 696 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 TMEM201Q5SNT2 666 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 PRAMEF13Q5VWM6 474 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 OGFOD3Q6PK18 319 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 RNF207Q6ZRF8 634 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 GK5Q6ZS86 529 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 C11orf57Q6ZUT1 292 aaPredicted RBP6.85□□□□□ -1.31
CAPN3-218ENST00000568153 ZNF765Q7L2R6 523 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 NIPA1Q7RTP0 329 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 PLA2G4DQ86XP0 818 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 DTX1Q86Y01 620 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 MCATQ8IVS2 390 aaKnown RBP6.85□□□□□ -1.31
CAPN3-218ENST00000568153 DHX40Q8IX18 779 aaKnown RBP6.85□□□□□ -1.31
CAPN3-218ENST00000568153 MRPL41Q8IXM3 137 aaKnown RBP6.85□□□□□ -1.31
CAPN3-218ENST00000568153 MB21D1Q8N884 522 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 ERMNQ8TAM6 284 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 ETNPPLQ8TBG4 499 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 SYTL5Q8TDW5 730 aaPredicted RBP6.85□□□□□ -1.31
CAPN3-218ENST00000568153 STAMQ92783 540 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 PDLIM2Q96JY6 352 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 C7orf25Q9BPX7 421 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 DPH2Q9BQC3 489 aaPredicted RBP6.85□□□□□ -1.31
CAPN3-218ENST00000568153 MXRA8Q9BRK3 442 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 MMTAG2Q9BU76 263 aaKnown RBP6.85□□□□□ -1.31
CAPN3-218ENST00000568153 DUSP23Q9BVJ7 150 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 FOXQ1Q9C009 403 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 TRIM5Q9C035 493 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 NT5C3AQ9H0P0 336 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 HOMER2Q9NSB8 354 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 BRCA1P38398 1863 aaKnown RBP6.85□□□□□ -1.31
CAPN3-218ENST00000568153 TCHHQ07283 1943 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 A0A087WWV3 80 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 A0A0G2JLL6 359 aaPredicted RBP6.84□□□□□ -1.31
CAPN3-218ENST00000568153 UPK3BL1B0FP48 263 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 UPK3BL2E5RIL1 263 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 FAM86B1E9PN63 330 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 NFIBO00712 420 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 MSH4O15457 936 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 ATE1O95260 518 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 FAM86B2P0C5J1 330 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 RPS6P62753 249 aaKnown RBP6.84□□□□□ -1.31
CAPN3-218ENST00000568153 PABPC4Q13310 644 aaKnown RBP eCLIP6.84□□□□□ -1.31
CAPN3-218ENST00000568153 GRB10Q13322 594 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 PPIL2Q13356 520 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 BAATQ14032 418 aaPredicted RBP6.84□□□□□ -1.31
CAPN3-218ENST00000568153 PLS1Q14651 629 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 TMEM132BQ14DG7 1078 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 HS1BP3Q53T59 392 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 NAALADL2Q58DX5 795 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 HYIQ5T013 277 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 ARHGEF16Q5VV41 709 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 SLC6A19Q695T7 634 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 SNRNP48Q6IEG0 339 aaKnown RBP6.84□□□□□ -1.31
CAPN3-218ENST00000568153 XRRA1Q6P2D8 792 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 NSMFQ6X4W1 530 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 GADL1Q6ZQY3 521 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 MOB2Q70IA6 237 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 PRRT2Q7Z6L0 340 aaPredicted RBP6.84□□□□□ -1.31
CAPN3-218ENST00000568153 AOPEPQ8N6M6 819 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 TOP6BLQ8N6T0 577 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 CHST13Q8NET6 341 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 REPS2Q8NFH8 660 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 GIMAP7Q8NHV1 300 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 CYP2W1Q8TAV3 490 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 ENOX1Q8TC92 643 aaKnown RBP6.84□□□□□ -1.31
CAPN3-218ENST00000568153 GPRASP2Q96D09 838 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 CLMNQ96JQ2 1002 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 TAAR1Q96RJ0 339 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 UIMC1Q96RL1 719 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 RMDN3Q96TC7 470 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 TEX13BQ9BXU2 312 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 OSBPL1AQ9BXW6 950 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 BLZF1Q9H2G9 400 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 PRDM10Q9NQV6 1147 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 RNF146Q9NTX7 359 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 DNM3Q9UQ16 869 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 RIPK3Q9Y572 518 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 SIPA1L1O43166 1804 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 ARFGEF1Q9Y6D6 1849 aa6.84□□□□□ -1.31
CAPN3-218ENST00000568153 GREB1LQ9C091 1923 aaPredicted RBP6.84□□□□□ -1.32
CAPN3-218ENST00000568153 BAZ2BQ9UIF8 2168 aaKnown RBP6.84□□□□□ -1.32
CAPN3-218ENST00000568153 IGLV3-22A0A075B6J6 115 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms